==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 25-AUG-06 2I5M . COMPND 2 MOLECULE: COLD SHOCK PROTEIN CSPB; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; . AUTHOR K.E.A.MAX,U.HEINEMANN . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4853.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 37.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 X M 0 0 125 0, 0.0 49,-0.2 0, 0.0 2,-0.1 0.000 360.0 360.0 360.0 128.5 47.5 -30.3 14.5 2 2 X L E -A 49 0A 68 47,-2.5 47,-1.8 1,-0.0 2,-0.4 -0.332 360.0-130.7 -69.5 161.9 44.5 -32.3 13.3 3 3 X E E +A 48 0A 125 45,-0.2 2,-0.3 -2,-0.1 45,-0.2 -0.969 36.9 152.9-119.1 127.4 43.3 -32.2 9.7 4 4 X G E -A 47 0A 9 43,-2.1 43,-2.6 -2,-0.4 2,-0.3 -0.841 36.9-125.6-139.1 175.3 39.6 -31.7 8.8 5 5 X K E -AB 46 19A 102 14,-1.7 14,-2.8 -2,-0.3 2,-0.6 -0.945 37.8-106.0-117.0 149.6 37.2 -30.4 6.1 6 6 X V E - B 0 18A 2 39,-1.7 38,-2.5 -2,-0.3 12,-0.3 -0.685 28.4-167.3 -75.9 112.3 34.6 -27.7 6.8 7 7 X K E S- 0 0 92 10,-1.9 2,-0.3 -2,-0.6 -1,-0.2 0.969 70.9 -28.5 -60.0 -58.4 31.3 -29.6 6.9 8 8 X W E - B 0 17A 92 9,-1.2 9,-1.7 -3,-0.1 -1,-0.3 -0.967 57.8-166.0-151.8 161.5 29.4 -26.3 6.7 9 9 X F E - B 0 16A 20 -2,-0.3 2,-1.0 7,-0.2 7,-0.3 -0.792 18.4-143.3-155.8 110.9 30.0 -22.6 7.8 10 10 X N E >> - B 0 15A 69 5,-2.3 4,-1.8 -2,-0.3 5,-1.1 -0.697 19.0-163.4 -70.0 99.7 27.4 -19.9 8.0 11 11 X S T 45S+ 0 0 41 -2,-1.0 -1,-0.2 1,-0.2 5,-0.1 0.664 82.3 49.2 -66.8 -21.7 29.6 -16.9 6.8 12 12 X E T 45S+ 0 0 193 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.832 118.9 36.0 -84.7 -39.1 27.2 -14.1 8.0 13 13 X K T 45S- 0 0 75 -3,-0.2 -2,-0.2 2,-0.2 17,-0.2 0.618 108.1-129.5 -84.3 -19.7 26.7 -15.5 11.6 14 14 X G T <5 + 0 0 6 -4,-1.8 16,-2.3 1,-0.2 2,-0.3 0.851 64.3 91.8 72.1 40.6 30.4 -16.8 11.7 15 15 X F E < +BC 10 29A 67 -5,-1.1 -5,-2.3 14,-0.2 2,-0.2 -0.990 31.1 130.1-153.1 162.3 30.1 -20.4 12.8 16 16 X G E -BC 9 28A 0 12,-2.1 12,-2.4 -2,-0.3 2,-0.3 -0.865 44.9 -71.9-172.7-152.4 29.9 -24.0 11.6 17 17 X F E -BC 8 27A 62 -9,-1.7 -10,-1.9 10,-0.2 -9,-1.2 -0.963 23.1-142.9-131.9 151.4 31.3 -27.5 12.0 18 18 X I E -BC 6 26A 0 8,-2.4 8,-2.1 -2,-0.3 2,-0.3 -0.936 16.6-142.7-111.8 125.9 34.5 -29.3 10.9 19 19 X E E +B 5 0A 81 -14,-2.8 -14,-1.7 -2,-0.5 2,-0.3 -0.710 20.3 174.5 -79.4 142.5 34.4 -32.9 9.8 20 20 X V > - 0 0 22 3,-0.4 3,-1.6 -2,-0.3 -16,-0.1 -0.879 37.1-113.5-146.6 116.3 37.2 -35.3 10.7 21 21 X E T 3 S+ 0 0 200 -2,-0.3 3,-0.1 1,-0.2 -2,-0.0 -0.083 97.9 16.4 -51.8 143.7 36.7 -39.0 9.7 22 22 X G T 3 S+ 0 0 89 1,-0.2 2,-0.3 0, 0.0 -1,-0.2 0.440 118.4 77.6 70.0 3.3 36.3 -41.5 12.6 23 23 X Q S < S- 0 0 102 -3,-1.6 -3,-0.4 1,-0.0 -1,-0.2 -0.843 88.5 -85.1-134.4 166.0 35.6 -38.7 15.1 24 24 X D - 0 0 141 -2,-0.3 -6,-0.1 1,-0.1 -1,-0.0 -0.428 53.2 -94.5 -70.3 150.8 32.7 -36.4 16.1 25 25 X D - 0 0 60 -2,-0.1 2,-0.4 -6,-0.1 -6,-0.2 -0.293 41.6-136.1 -61.0 150.7 32.1 -33.1 14.2 26 26 X V E -C 18 0A 8 -8,-2.1 -8,-2.4 -3,-0.1 2,-0.1 -0.977 9.1-125.6-121.9 122.8 33.8 -30.1 15.8 27 27 X F E -C 17 0A 68 -2,-0.4 33,-3.0 31,-0.4 2,-0.4 -0.449 25.3-165.3 -65.2 136.7 32.2 -26.7 16.3 28 28 X V E -C 16 0A 0 -12,-2.4 -12,-2.1 31,-0.2 2,-0.3 -0.995 4.0-164.4-130.3 125.0 34.1 -23.8 14.9 29 29 X H E > -C 15 0A 58 -2,-0.4 3,-2.1 31,-0.4 4,-0.4 -0.766 35.8-111.1-102.2 154.6 33.5 -20.2 15.8 30 30 X F G > S+ 0 0 90 -16,-2.3 3,-1.8 -2,-0.3 -15,-0.1 0.815 113.1 69.1 -57.0 -33.1 34.9 -17.3 13.7 31 31 X S G 3 S+ 0 0 79 1,-0.3 -1,-0.3 -17,-0.2 -16,-0.1 0.578 91.1 60.9 -62.2 -18.7 37.2 -16.3 16.6 32 32 X A G < S+ 0 0 9 -3,-2.1 31,-2.1 29,-0.1 2,-0.3 0.630 80.9 106.5 -79.1 -17.8 39.2 -19.6 16.1 33 33 X I B < -e 63 0B 6 -3,-1.8 31,-0.2 -4,-0.4 2,-0.2 -0.511 58.3-152.7 -75.3 128.2 40.2 -18.6 12.5 34 34 X Q + 0 0 82 29,-2.9 31,-0.2 -2,-0.3 2,-0.2 -0.483 47.2 52.7 -93.0 165.0 43.9 -17.5 12.1 35 35 X G S S- 0 0 61 -2,-0.2 2,-0.2 29,-0.1 4,-0.1 -0.592 83.2 -61.4 106.0-171.1 45.3 -15.2 9.5 36 36 X E S S+ 0 0 192 -2,-0.2 -2,-0.0 2,-0.1 0, 0.0 -0.532 87.7 29.3-102.9 174.6 44.6 -11.7 8.3 37 37 X G S S- 0 0 61 -2,-0.2 2,-0.3 2,-0.1 0, 0.0 -0.118 106.8 -2.6 74.0-169.4 41.4 -10.2 6.7 38 38 X F S S- 0 0 157 1,-0.1 2,-0.9 0, 0.0 -2,-0.1 -0.430 71.9-128.7 -60.7 121.2 37.8 -11.3 7.0 39 39 X K + 0 0 86 -2,-0.3 2,-0.3 -4,-0.1 -1,-0.1 -0.589 57.3 119.9 -81.2 101.7 37.5 -14.3 9.3 40 40 X T - 0 0 16 -2,-0.9 2,-0.3 -10,-0.0 -29,-0.1 -0.960 43.3-147.2-153.4 169.0 35.5 -16.9 7.5 41 41 X L - 0 0 0 -2,-0.3 2,-0.3 -26,-0.0 -27,-0.1 -0.963 11.7-142.1-135.2 155.0 35.4 -20.4 6.0 42 42 X E > - 0 0 114 -2,-0.3 3,-1.3 -34,-0.1 -36,-0.3 -0.783 36.1 -85.7-116.3 158.8 33.7 -22.1 3.1 43 43 X E T 3 S+ 0 0 153 -2,-0.3 -36,-0.2 1,-0.2 -35,-0.1 -0.393 111.6 15.9 -60.9 136.3 32.2 -25.6 2.7 44 44 X G T 3 S+ 0 0 45 -38,-2.5 2,-0.3 1,-0.3 -1,-0.2 0.383 87.6 145.1 78.6 1.4 34.7 -28.4 1.7 45 45 X Q < - 0 0 48 -3,-1.3 -39,-1.7 -39,-0.2 -1,-0.3 -0.545 50.3-125.1 -77.0 126.1 37.7 -26.2 2.6 46 46 X K E -A 5 0A 155 -2,-0.3 2,-0.3 -41,-0.2 -41,-0.2 -0.475 35.3-172.6 -69.4 138.7 40.6 -28.3 4.1 47 47 X V E -A 4 0A 5 -43,-2.6 -43,-2.1 -2,-0.2 2,-0.4 -0.933 27.3-143.5-134.8 160.6 41.8 -27.0 7.6 48 48 X R E +AD 3 64A 115 16,-2.1 16,-2.1 -2,-0.3 2,-0.3 -0.987 44.1 143.9-118.6 124.6 44.5 -27.5 10.2 49 49 X F E -A 2 0A 0 -47,-1.8 -47,-2.5 -2,-0.4 2,-0.3 -0.967 42.1-123.6-155.5 169.4 43.2 -27.2 13.8 50 50 X E E - D 0 61A 74 11,-2.8 11,-2.5 -2,-0.3 2,-0.6 -0.922 21.4-132.1-116.0 149.3 43.2 -28.2 17.5 51 51 X I E - D 0 60A 57 -2,-0.3 2,-0.4 9,-0.2 9,-0.2 -0.925 26.5-171.0 -95.9 117.6 40.3 -29.4 19.6 52 52 X V E - D 0 59A 77 7,-2.4 7,-1.4 -2,-0.6 2,-0.4 -0.963 0.5-168.6-109.2 135.0 40.3 -27.5 22.9 53 53 X E E + D 0 58A 141 -2,-0.4 2,-0.2 5,-0.2 -2,-0.0 -0.975 19.1 148.1-131.4 116.5 37.9 -28.6 25.7 54 54 X G E > S- D 0 57A 52 3,-0.8 3,-1.6 -2,-0.4 -2,-0.0 -0.317 72.9 -54.8-114.3-153.9 37.1 -26.7 28.9 55 55 X N T 3 S+ 0 0 174 1,-0.3 -2,-0.0 -2,-0.2 0, 0.0 0.560 132.3 60.8 -68.1 -14.3 33.8 -26.7 30.9 56 56 X R T 3 S- 0 0 232 1,-0.3 -1,-0.3 3,-0.0 -3,-0.0 0.479 113.2-110.5 -86.5 -7.2 31.7 -25.7 27.8 57 57 X G E < -D 54 0A 23 -3,-1.6 -3,-0.8 2,-0.0 -1,-0.3 -0.402 53.1 -31.4 99.9 177.1 32.7 -28.8 25.8 58 58 X P E +D 53 0A 77 0, 0.0 -31,-0.4 0, 0.0 2,-0.3 -0.397 60.4 155.0 -75.2 144.4 35.0 -29.3 22.8 59 59 X Q E -D 52 0A 79 -7,-1.4 -7,-2.4 -33,-0.1 -31,-0.2 -0.961 43.0 -85.0-153.7 171.0 35.5 -26.8 20.0 60 60 X A E +D 51 0A 3 -33,-3.0 -31,-0.4 -2,-0.3 2,-0.3 -0.448 39.5 178.9 -82.8 148.3 38.1 -25.9 17.4 61 61 X A E +D 50 0A 22 -11,-2.5 -11,-2.8 1,-0.1 -29,-0.1 -0.943 59.9 22.5-139.8 159.4 41.0 -23.6 18.0 62 62 X N E S- 0 0 66 -2,-0.3 2,-0.6 -13,-0.2 -29,-0.2 0.919 74.3-178.0 48.2 55.3 43.9 -22.4 15.8 63 63 X V E +e 33 0B 0 -31,-2.1 -29,-2.9 -14,-0.1 2,-0.3 -0.770 6.0 171.4 -87.0 118.4 42.1 -23.0 12.5 64 64 X T E -D 48 0A 50 -16,-2.1 -16,-2.1 -2,-0.6 -29,-0.1 -0.969 25.4-168.3-123.0 143.8 44.2 -22.2 9.5 65 65 X K 0 0 78 -2,-0.3 -1,-0.2 -31,-0.2 -30,-0.1 0.883 360.0 360.0 -88.5 -56.7 43.3 -23.0 5.8 66 66 X E 0 0 197 -19,-0.0 -1,-0.2 -18,-0.0 -18,-0.1 -0.450 360.0 360.0-140.0 360.0 46.8 -22.2 4.5