==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT, MEMBRANE PROTEIN 29-AUG-06 2I6V . COMPND 2 MOLECULE: GENERAL SECRETION PATHWAY PROTEIN C; . SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; . AUTHOR K.V.KOROTKOV,B.KRUMM,M.BAGDASARIAN,W.G.J.HOL . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5632.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 77.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 35.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 14.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 219 A Q 0 0 107 0, 0.0 2,-0.7 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 154.0 5.7 20.4 -4.4 2 220 A E > + 0 0 101 1,-0.2 3,-2.0 85,-0.1 4,-0.5 -0.664 360.0 169.9-116.0 79.9 5.0 16.7 -4.9 3 221 A I G >> S+ 0 0 44 -2,-0.7 3,-1.9 1,-0.3 4,-1.9 0.838 74.4 70.5 -54.2 -34.6 5.0 14.9 -1.6 4 222 A F G 34 S+ 0 0 102 1,-0.3 23,-2.4 2,-0.2 -1,-0.3 0.663 87.9 63.3 -61.5 -17.5 3.6 11.8 -3.3 5 223 A Q G <4 S+ 0 0 40 -3,-2.0 23,-2.3 21,-0.2 27,-0.4 0.796 113.2 34.9 -71.7 -27.3 6.9 11.2 -5.1 6 224 A Y T <4 S- 0 0 23 -3,-1.9 20,-0.8 -4,-0.5 2,-0.3 0.784 125.8 -4.9 -97.3 -36.3 8.6 10.7 -1.7 7 225 A V E < -A 25 0A 7 -4,-1.9 2,-0.4 18,-0.2 -1,-0.3 -0.995 46.6-139.5-161.9 153.0 6.0 9.0 0.5 8 226 A R E -A 24 0A 137 16,-2.4 16,-2.6 -2,-0.3 2,-0.4 -0.965 25.6-158.7-119.8 144.7 2.5 7.7 1.0 9 227 A L E -A 23 0A 78 -2,-0.4 2,-0.3 14,-0.2 14,-0.2 -0.945 12.3-177.1-127.2 143.5 0.6 8.1 4.3 10 228 A S E -A 22 0A 56 12,-1.5 12,-2.5 -2,-0.4 2,-0.1 -0.988 34.2-100.8-135.2 148.9 -2.3 6.4 6.0 11 229 A Q E -A 21 0A 103 -2,-0.3 2,-0.5 10,-0.2 10,-0.2 -0.371 20.2-162.1 -70.4 142.9 -4.0 7.3 9.3 12 230 A V E +A 20 0A 51 8,-2.4 7,-3.4 -2,-0.1 8,-1.1 -0.991 29.3 178.5-116.8 115.2 -3.4 5.4 12.5 13 231 A K E -A 18 0A 90 -2,-0.5 2,-0.6 5,-0.3 5,-0.2 -0.842 39.6-146.2-121.1 154.0 -6.3 6.3 14.8 14 232 A R E > S-A 17 0A 136 3,-2.7 3,-2.5 -2,-0.3 2,-0.4 -0.970 85.5 -51.5-108.2 107.6 -7.7 5.5 18.3 15 233 A D T 3 S- 0 0 134 -2,-0.6 -2,-0.1 1,-0.3 0, 0.0 -0.489 124.7 -21.0 60.9-114.7 -11.4 5.7 17.5 16 234 A D T 3 S+ 0 0 145 -2,-0.4 2,-0.5 -3,-0.1 -1,-0.3 0.380 116.7 101.5-105.2 3.9 -11.7 9.0 15.7 17 235 A K E < S-A 14 0A 116 -3,-2.5 -3,-2.7 2,-0.0 2,-0.4 -0.782 70.6-133.2 -93.1 125.2 -8.5 10.5 17.1 18 236 A V E +A 13 0A 28 -2,-0.5 -5,-0.3 -5,-0.2 3,-0.1 -0.649 23.7 179.3 -78.4 128.6 -5.5 10.5 14.7 19 237 A L E - 0 0 88 -7,-3.4 2,-0.3 1,-0.4 -6,-0.2 0.661 59.1 -55.3-100.4 -25.5 -2.4 9.3 16.4 20 238 A G E -A 12 0A 0 -8,-1.1 -8,-2.4 31,-0.1 2,-0.4 -0.948 59.1 -83.1 166.4-174.4 0.1 9.5 13.5 21 239 A Y E -AB 11 43A 46 22,-2.3 22,-3.5 -2,-0.3 2,-0.3 -0.984 28.2-130.5-127.6 126.8 0.6 8.3 9.9 22 240 A R E -AB 10 42A 82 -12,-2.5 -12,-1.5 -2,-0.4 2,-0.4 -0.577 29.1-131.2 -69.6 133.5 1.9 5.0 8.7 23 241 A V E +A 9 0A 0 18,-3.0 17,-3.1 -2,-0.3 18,-0.3 -0.740 29.0 174.3 -90.3 132.1 4.6 5.5 6.0 24 242 A S E -A 8 0A 32 -16,-2.6 -16,-2.4 -2,-0.4 14,-0.0 -0.899 44.4 -77.0-126.5 159.9 4.5 3.6 2.7 25 243 A P E -A 7 0A 61 0, 0.0 -18,-0.2 0, 0.0 -19,-0.1 -0.251 46.7-137.1 -56.7 140.3 6.7 3.9 -0.3 26 244 A G - 0 0 11 -20,-0.8 -21,-0.2 2,-0.2 -20,-0.2 -0.059 37.2 -81.7 -81.3-166.7 6.0 6.9 -2.5 27 245 A K S S+ 0 0 131 -23,-2.4 -22,-0.2 -20,-0.2 -21,-0.1 0.836 115.8 55.3 -70.1 -34.6 6.0 6.9 -6.3 28 246 A D >> - 0 0 57 -23,-2.3 4,-2.2 -24,-0.2 3,-0.6 -0.891 62.2-163.8-110.0 109.0 9.8 7.2 -6.7 29 247 A P H 3> S+ 0 0 90 0, 0.0 4,-2.7 0, 0.0 5,-0.4 0.802 90.3 62.6 -57.8 -31.0 12.0 4.6 -5.0 30 248 A V H 3> S+ 0 0 102 2,-0.2 4,-2.1 1,-0.2 5,-0.2 0.916 108.4 41.4 -62.2 -41.6 15.1 6.8 -5.4 31 249 A L H <> S+ 0 0 37 -3,-0.6 4,-1.8 -26,-0.3 -1,-0.2 0.955 115.7 48.8 -70.2 -49.2 13.5 9.5 -3.2 32 250 A F H <>S+ 0 0 5 -4,-2.2 5,-1.9 -27,-0.4 4,-0.5 0.924 119.6 37.8 -58.0 -45.7 12.0 7.1 -0.6 33 251 A E H ><5S+ 0 0 131 -4,-2.7 3,-0.9 1,-0.2 -1,-0.2 0.902 112.0 56.1 -75.3 -40.6 15.3 5.2 -0.2 34 252 A S H 3<5S+ 0 0 87 -4,-2.1 -1,-0.2 -5,-0.4 -2,-0.2 0.807 108.6 48.6 -65.0 -26.9 17.7 8.1 -0.5 35 253 A I T 3<5S- 0 0 27 -4,-1.8 49,-0.4 -5,-0.2 -1,-0.3 0.579 115.9-116.8 -90.0 -8.9 16.0 9.9 2.4 36 254 A G T < 5 + 0 0 33 -3,-0.9 -3,-0.2 -4,-0.5 2,-0.2 0.739 57.5 152.7 86.3 25.9 16.1 6.8 4.5 37 255 A L < - 0 0 2 -5,-1.9 2,-0.4 4,-0.0 -1,-0.2 -0.492 26.6-156.5 -81.0 158.3 12.4 5.9 5.0 38 256 A Q > - 0 0 103 -2,-0.2 3,-2.1 -14,-0.0 -15,-0.2 -0.993 29.7 -97.4-134.8 141.0 11.2 2.4 5.6 39 257 A D T 3 S+ 0 0 91 -2,-0.4 -15,-0.2 1,-0.3 3,-0.1 -0.306 111.8 26.9 -53.6 135.4 7.8 0.9 5.0 40 258 A G T 3 S+ 0 0 36 -17,-3.1 -1,-0.3 1,-0.3 -16,-0.1 0.418 82.8 143.8 86.9 -2.3 5.8 0.9 8.3 41 259 A D < - 0 0 5 -3,-2.1 -18,-3.0 -18,-0.3 2,-0.7 -0.363 51.5-124.1 -58.4 151.3 7.7 3.8 9.8 42 260 A M E -BC 22 75A 45 33,-2.3 33,-2.5 -20,-0.2 2,-0.4 -0.898 18.4-150.4-105.6 113.4 5.3 6.0 11.9 43 261 A A E +BC 21 74A 0 -22,-3.5 -22,-2.3 -2,-0.7 31,-0.2 -0.664 27.0 161.0 -84.4 129.6 5.3 9.7 10.9 44 262 A V E + 0 0 31 29,-2.8 7,-1.6 -2,-0.4 8,-0.4 0.621 56.9 24.3-124.0 -22.8 4.5 12.0 13.8 45 263 A A E -DC 50 73A 14 28,-1.3 28,-2.4 5,-0.2 2,-0.4 -0.989 50.3-155.7-145.3 157.2 5.7 15.5 12.8 46 264 A L E > S-DC 49 72A 7 3,-2.6 3,-2.0 -2,-0.3 26,-0.2 -0.993 89.7 -12.9-132.6 121.7 6.3 17.6 9.8 47 265 A N T 3 S- 0 0 52 24,-3.4 25,-0.1 -2,-0.4 3,-0.1 0.824 129.3 -58.1 51.2 32.8 8.8 20.5 10.2 48 266 A G T 3 S+ 0 0 64 23,-0.3 2,-0.3 1,-0.3 -1,-0.3 0.434 114.3 119.4 82.5 -0.8 8.5 19.9 14.0 49 267 A L E < S-D 46 0A 71 -3,-2.0 -3,-2.6 1,-0.1 2,-0.4 -0.738 75.8 -98.1-101.3 148.1 4.7 20.5 13.9 50 268 A D E > -D 45 0A 72 -2,-0.3 3,-1.8 -5,-0.2 -5,-0.2 -0.469 22.6-153.0 -72.6 118.5 2.2 17.8 14.9 51 269 A L T 3 S+ 0 0 8 -7,-1.6 -1,-0.2 -2,-0.4 -6,-0.1 0.708 92.9 64.9 -60.5 -21.0 0.9 15.9 11.8 52 270 A T T 3 S+ 0 0 30 -8,-0.4 -1,-0.3 -33,-0.1 -34,-0.2 0.361 78.5 89.1 -89.6 4.3 -2.3 15.2 13.8 53 271 A D <> - 0 0 73 -3,-1.8 4,-2.7 1,-0.2 5,-0.2 -0.851 60.6-170.5 -98.5 97.6 -3.3 18.9 14.0 54 272 A P H > S+ 0 0 89 0, 0.0 4,-2.7 0, 0.0 -1,-0.2 0.840 81.5 48.3 -64.5 -35.0 -5.3 19.3 10.8 55 273 A N H > S+ 0 0 132 2,-0.2 4,-2.2 1,-0.2 5,-0.1 0.906 112.4 48.9 -71.9 -38.8 -5.6 23.1 10.9 56 274 A V H > S+ 0 0 54 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.934 112.9 48.9 -60.4 -47.6 -1.9 23.5 11.5 57 275 A M H X S+ 0 0 10 -4,-2.7 4,-3.0 2,-0.2 5,-0.2 0.933 107.8 54.0 -60.1 -45.9 -1.2 21.2 8.6 58 276 A N H X S+ 0 0 88 -4,-2.7 4,-1.9 1,-0.2 -1,-0.2 0.935 110.2 47.5 -51.6 -46.6 -3.6 23.1 6.4 59 277 A T H X S+ 0 0 90 -4,-2.2 4,-0.6 1,-0.2 -1,-0.2 0.928 111.7 49.7 -64.2 -44.5 -1.7 26.3 7.1 60 278 A L H >< S+ 0 0 20 -4,-2.4 3,-1.4 1,-0.2 4,-0.3 0.935 109.9 51.4 -59.5 -45.1 1.7 24.6 6.5 61 279 A F H >< S+ 0 0 88 -4,-3.0 3,-1.3 1,-0.3 4,-0.3 0.829 100.4 62.1 -64.2 -31.8 0.5 23.2 3.2 62 280 A Q H 3< S+ 0 0 134 -4,-1.9 -1,-0.3 1,-0.2 3,-0.2 0.713 108.7 44.7 -63.2 -19.6 -0.7 26.6 2.0 63 281 A S T X< S+ 0 0 45 -3,-1.4 3,-2.1 -4,-0.6 -1,-0.2 0.394 82.4 101.9-102.0 0.3 2.9 27.7 2.2 64 282 A M G X + 0 0 19 -3,-1.3 3,-1.4 1,-0.3 -1,-0.1 0.728 66.8 68.9 -70.9 -19.7 4.5 24.7 0.6 65 283 A N G 3 S+ 0 0 108 -4,-0.3 -1,-0.3 1,-0.3 -2,-0.1 0.644 102.0 50.2 -66.9 -14.2 5.1 26.4 -2.8 66 284 A E G < S+ 0 0 141 -3,-2.1 2,-0.3 2,-0.0 -1,-0.3 0.390 92.9 101.6-100.0 -0.6 7.7 28.5 -1.0 67 285 A M < + 0 0 39 -3,-1.4 3,-0.1 -4,-0.2 -3,-0.0 -0.657 41.7 178.7 -89.0 140.5 9.4 25.5 0.6 68 286 A T S S+ 0 0 92 -2,-0.3 19,-2.5 1,-0.3 2,-0.3 0.476 74.6 11.2-110.1 -9.6 12.6 24.1 -0.7 69 287 A E E - E 0 86A 115 17,-0.2 -1,-0.3 18,-0.2 2,-0.3 -0.982 59.4-164.8-160.8 159.5 12.9 21.4 2.0 70 288 A M E - E 0 85A 8 15,-2.2 15,-3.1 -2,-0.3 2,-0.4 -0.976 14.5-137.5-143.7 155.1 10.9 19.7 4.8 71 289 A S E - E 0 84A 21 -2,-0.3 -24,-3.4 13,-0.2 2,-0.5 -0.969 11.8-162.5-115.2 136.5 11.7 17.4 7.7 72 290 A L E -CE 46 83A 6 11,-2.6 11,-3.0 -2,-0.4 2,-0.6 -0.972 10.5-148.3-115.1 122.0 9.5 14.4 8.6 73 291 A T E -CE 45 82A 14 -28,-2.4 -29,-2.8 -2,-0.5 -28,-1.3 -0.807 23.6-176.9 -89.8 124.6 9.9 13.0 12.1 74 292 A V E -CE 43 81A 0 7,-2.8 7,-2.1 -2,-0.6 2,-0.5 -0.884 22.8-137.5-121.8 156.6 9.3 9.3 12.2 75 293 A E E +CE 42 80A 80 -33,-2.5 -33,-2.3 -2,-0.3 2,-0.4 -0.949 26.8 169.1-111.5 130.2 9.2 6.6 14.9 76 294 A R E > S- E 0 79A 51 3,-2.7 3,-1.7 -2,-0.5 -35,-0.1 -0.981 70.2 -8.7-144.8 122.8 10.9 3.3 14.2 77 295 A D T 3 S- 0 0 157 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.863 129.8 -55.4 53.5 39.6 11.6 0.6 16.8 78 296 A G T 3 S+ 0 0 68 1,-0.2 2,-0.3 0, 0.0 -1,-0.3 0.449 118.9 101.6 80.0 2.3 10.5 3.0 19.5 79 297 A Q E < -E 76 0A 149 -3,-1.7 -3,-2.7 2,-0.0 2,-0.3 -0.905 61.2-137.0-119.8 148.4 13.0 5.7 18.6 80 298 A Q E +E 75 0A 115 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.785 25.2 163.1-103.2 144.7 12.4 8.9 16.7 81 299 A H E -E 74 0A 71 -7,-2.1 -7,-2.8 -2,-0.3 2,-0.4 -0.980 34.5-108.4-149.2 166.2 14.6 10.6 14.0 82 300 A D E -E 73 0A 66 -2,-0.3 2,-0.5 -9,-0.2 -9,-0.2 -0.789 19.7-154.5-100.8 134.9 14.2 13.2 11.3 83 301 A V E -E 72 0A 1 -11,-3.0 -11,-2.6 -2,-0.4 2,-0.7 -0.905 15.8-139.6-104.8 130.0 14.0 12.5 7.6 84 302 A Y E -E 71 0A 163 -2,-0.5 2,-0.6 -49,-0.4 -13,-0.2 -0.838 13.0-163.3-101.1 116.5 15.2 15.3 5.4 85 303 A I E -E 70 0A 3 -15,-3.1 -15,-2.2 -2,-0.7 2,-0.6 -0.876 4.8-157.4 -99.2 122.1 13.1 15.8 2.2 86 304 A Q E E 69 0A 112 -2,-0.6 -17,-0.2 -17,-0.2 -51,-0.0 -0.895 360.0 360.0-101.9 121.8 14.8 18.0 -0.5 87 305 A F 0 0 61 -19,-2.5 -18,-0.2 -2,-0.6 -1,-0.1 0.496 360.0 360.0 -95.0 360.0 12.5 19.7 -3.0