==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=12-JUL-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 29-NOV-12 4I68 . COMPND 2 MOLECULE: HEAT RESISTANT RNA DEPENDENT ATPASE; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; . AUTHOR M.G.RUDOLPH,D.KLOSTERMEIER . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6203.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 27.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 421 A G 0 0 97 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-170.1 -24.4 25.7 38.1 2 422 A A - 0 0 58 3,-0.0 56,-0.1 0, 0.0 3,-0.1 -0.963 360.0 -91.9-163.2 147.6 -21.3 27.2 36.6 3 423 A M - 0 0 167 -2,-0.3 2,-0.0 54,-0.2 0, 0.0 -0.284 58.7 -90.2 -55.5 145.6 -19.3 30.4 36.5 4 424 A A + 0 0 101 9,-0.1 2,-0.3 10,-0.0 -1,-0.1 -0.352 54.2 179.3 -58.7 140.4 -20.1 32.7 33.6 5 425 A E - 0 0 65 -3,-0.1 9,-2.3 -2,-0.0 10,-0.7 -0.988 16.6-151.6-147.9 148.6 -18.0 32.0 30.5 6 426 A R B -A 13 0A 142 -2,-0.3 11,-0.4 7,-0.3 7,-0.3 -0.973 28.5-105.0-125.4 142.6 -17.7 33.3 27.0 7 427 A S > - 0 0 5 5,-2.8 4,-1.5 -2,-0.4 9,-0.1 -0.377 15.2-152.1 -62.3 133.4 -16.5 31.7 23.8 8 428 A L T 4 S+ 0 0 86 1,-0.2 -1,-0.2 2,-0.2 66,-0.1 0.639 97.8 51.6 -76.8 -15.3 -13.1 32.8 22.7 9 429 A L T 4 S+ 0 0 26 3,-0.1 -1,-0.2 34,-0.1 35,-0.0 0.880 131.3 6.0 -85.6 -42.9 -14.3 32.0 19.1 10 430 A T T 4 S- 0 0 57 2,-0.2 -2,-0.2 33,-0.1 3,-0.1 0.511 87.8-122.1-120.2 -15.4 -17.5 34.0 19.0 11 431 A G < + 0 0 35 -4,-1.5 2,-0.3 1,-0.3 -3,-0.1 0.452 62.7 143.4 77.6 1.9 -17.7 36.0 22.2 12 432 A E - 0 0 99 -6,-0.1 -5,-2.8 1,-0.1 3,-0.4 -0.561 50.1-125.1 -76.8 134.0 -21.1 34.4 23.0 13 433 A E B S+A 6 0A 127 -2,-0.3 -7,-0.3 -7,-0.3 3,-0.1 -0.298 88.3 55.2 -67.1 158.4 -21.7 33.6 26.7 14 434 A G S S+ 0 0 23 -9,-2.3 2,-0.3 1,-0.2 -1,-0.2 0.632 92.3 87.4 94.5 13.3 -22.6 30.0 27.6 15 435 A W - 0 0 22 -10,-0.7 2,-0.5 -3,-0.4 -1,-0.2 -0.998 56.0-155.9-145.6 140.3 -19.6 28.4 26.0 16 436 A R E -B 55 0B 52 39,-3.4 39,-2.6 -2,-0.3 2,-0.5 -0.983 25.5-133.0-112.4 130.1 -16.0 27.6 27.0 17 437 A T E -B 54 0B 3 -2,-0.5 54,-2.6 -11,-0.4 2,-0.3 -0.699 25.8-175.1 -87.2 126.3 -13.6 27.2 24.2 18 438 A Y E -BC 53 70B 15 35,-2.9 35,-2.5 -2,-0.5 2,-0.5 -0.761 18.3-136.3-109.2 159.3 -11.3 24.2 24.3 19 439 A K E -BC 52 69B 50 50,-3.3 50,-1.9 -2,-0.3 2,-0.6 -0.989 8.4-154.9-116.1 131.4 -8.4 23.2 22.0 20 440 A A E +BC 51 68B 4 31,-3.1 31,-2.0 -2,-0.5 48,-0.2 -0.913 20.7 168.8-101.2 117.7 -8.1 19.6 20.8 21 441 A T E + 0 0 59 46,-2.2 47,-0.1 -2,-0.6 -1,-0.1 0.464 37.7 84.2-116.9 -0.4 -4.5 18.9 20.0 22 442 A G E + C 0 67B 18 45,-0.5 45,-1.8 1,-0.1 -1,-0.3 -0.925 65.1 7.7 177.5 158.6 -4.1 15.2 19.4 23 443 A P S S- 0 0 88 0, 0.0 2,-0.2 0, 0.0 44,-0.1 0.617 89.1 -78.8 -82.1-158.6 -4.1 12.6 18.2 24 444 A A + 0 0 103 -2,-0.2 2,-0.3 -3,-0.0 -2,-0.1 -0.450 65.3 163.0 -64.9 126.9 -4.7 12.9 14.4 25 445 A L - 0 0 51 -2,-0.2 2,-0.2 4,-0.0 -1,-0.0 -0.999 36.6-132.1-145.4 144.5 -8.5 13.4 13.9 26 446 A S > - 0 0 67 -2,-0.3 4,-2.2 1,-0.1 5,-0.2 -0.534 38.7-108.1 -81.4 160.6 -10.8 14.6 11.2 27 447 A L H > S+ 0 0 47 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.944 119.3 49.8 -55.7 -48.0 -13.4 17.1 12.2 28 448 A P H > S+ 0 0 93 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.878 109.4 51.9 -64.7 -32.8 -16.3 14.6 11.9 29 449 A A H > S+ 0 0 35 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.929 110.9 48.2 -63.1 -43.6 -14.4 12.1 14.0 30 450 A L H X S+ 0 0 0 -4,-2.2 4,-2.3 1,-0.2 5,-0.2 0.939 113.4 46.7 -61.7 -46.6 -13.8 14.7 16.7 31 451 A V H X S+ 0 0 5 -4,-2.7 4,-2.7 1,-0.2 5,-0.2 0.908 111.9 49.8 -65.6 -40.7 -17.4 15.8 16.8 32 452 A A H X S+ 0 0 63 -4,-2.4 4,-2.0 -5,-0.2 -1,-0.2 0.914 110.5 52.2 -63.1 -40.4 -18.7 12.2 16.9 33 453 A L H < S+ 0 0 80 -4,-2.2 4,-0.5 -5,-0.2 -2,-0.2 0.936 112.1 43.9 -59.8 -49.7 -16.4 11.4 19.8 34 454 A L H ><>S+ 0 0 0 -4,-2.3 5,-1.9 1,-0.2 3,-1.4 0.907 112.8 51.0 -64.4 -42.9 -17.5 14.4 21.8 35 455 A K H ><5S+ 0 0 109 -4,-2.7 3,-1.7 1,-0.3 -1,-0.2 0.861 103.7 62.1 -62.8 -32.0 -21.2 13.7 21.1 36 456 A G T 3<5S+ 0 0 66 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.664 98.5 54.4 -66.0 -18.3 -20.5 10.2 22.2 37 457 A Q T < 5S- 0 0 115 -3,-1.4 -1,-0.3 -4,-0.5 -2,-0.2 0.287 124.8-104.9 -94.5 6.1 -19.6 11.4 25.7 38 458 A G T < 5S+ 0 0 71 -3,-1.7 2,-0.3 1,-0.3 -3,-0.2 0.659 70.9 152.7 78.7 18.1 -23.0 13.2 25.8 39 459 A L < - 0 0 27 -5,-1.9 2,-0.6 1,-0.0 -1,-0.3 -0.627 46.1-132.7 -84.1 136.3 -21.4 16.6 25.2 40 460 A E - 0 0 111 -2,-0.3 16,-0.6 16,-0.0 2,-0.5 -0.793 28.0-146.9 -82.7 121.5 -23.4 19.4 23.6 41 461 A V E -D 55 0B 30 -2,-0.6 14,-0.2 14,-0.1 43,-0.2 -0.796 16.9-174.1-101.3 126.8 -21.0 20.8 20.9 42 462 A G E - 0 0 6 12,-2.9 42,-0.4 -2,-0.5 40,-0.1 0.174 51.5 -24.5 -91.1-144.5 -21.1 24.5 20.0 43 463 A K E - 0 0 51 40,-0.1 11,-2.4 10,-0.1 2,-0.3 -0.334 61.5-162.0 -70.7 150.2 -19.1 26.1 17.3 44 464 A V E -DE 53 82B 2 38,-2.4 38,-2.2 9,-0.2 2,-0.4 -0.957 8.9-171.1-131.0 148.7 -15.9 24.6 16.0 45 465 A A E -D 52 0B 0 7,-2.3 7,-2.7 -2,-0.3 2,-0.2 -0.950 20.2-133.6-144.1 122.5 -13.0 25.9 14.0 46 466 A E E +D 51 0B 79 -2,-0.4 32,-2.6 34,-0.2 33,-0.7 -0.495 33.1 176.8 -66.6 140.3 -10.1 24.0 12.4 47 467 A A E > -DF 50 77B 6 3,-2.9 3,-0.9 30,-0.3 30,-0.2 -0.863 44.8 -97.9-138.5 173.2 -6.7 25.6 13.1 48 468 A E T 3 S+ 0 0 161 28,-1.8 28,-0.1 -2,-0.3 29,-0.1 0.918 122.7 43.5 -59.9 -43.3 -3.0 24.9 12.4 49 469 A G T 3 S- 0 0 41 26,-0.3 2,-0.3 1,-0.1 -1,-0.2 0.441 128.8 -77.2 -86.6 1.4 -2.5 23.4 15.8 50 470 A G E < S- D 0 47B 17 -3,-0.9 -3,-2.9 2,-0.0 2,-0.4 -0.994 73.0 -31.2 144.9-138.4 -5.7 21.4 16.0 51 471 A F E -BD 20 46B 18 -31,-2.0 -31,-3.1 -2,-0.3 2,-0.5 -0.981 36.5-148.1-125.5 135.5 -9.3 22.2 16.6 52 472 A Y E +BD 19 45B 0 -7,-2.7 -7,-2.3 -2,-0.4 2,-0.4 -0.866 27.7 179.8 -92.2 131.3 -11.0 24.9 18.7 53 473 A V E -BD 18 44B 1 -35,-2.5 -35,-2.9 -2,-0.5 2,-0.4 -0.990 23.0-136.8-140.2 129.8 -14.3 23.6 20.0 54 474 A D E +B 17 0B 1 -11,-2.4 -12,-2.9 -2,-0.4 2,-0.3 -0.706 26.5 175.5 -85.4 130.6 -16.9 25.2 22.2 55 475 A L E -BD 16 41B 0 -39,-2.6 -39,-3.4 -2,-0.4 -14,-0.1 -0.874 40.0 -84.2-126.6 164.2 -18.4 23.2 25.0 56 476 A R > - 0 0 91 -16,-0.6 3,-1.4 -2,-0.3 -41,-0.2 -0.366 35.4-121.1 -70.5 147.2 -20.8 24.1 27.8 57 477 A P T 3 S+ 0 0 22 0, 0.0 -54,-0.2 0, 0.0 -1,-0.1 0.790 112.5 58.5 -60.2 -26.1 -19.3 25.8 30.9 58 478 A E T 3 S+ 0 0 119 -56,-0.1 -2,-0.0 2,-0.0 -43,-0.0 0.775 87.3 103.9 -71.2 -24.8 -20.8 23.0 33.1 59 479 A A < - 0 0 18 -3,-1.4 -4,-0.1 1,-0.1 -20,-0.0 -0.248 47.3-174.3 -64.5 139.8 -18.9 20.4 31.1 60 480 A R - 0 0 227 2,-0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.642 28.7-154.8-125.3 72.9 -15.8 18.7 32.4 61 481 A P + 0 0 17 0, 0.0 2,-0.3 0, 0.0 7,-0.1 -0.131 20.4 176.7 -61.2 137.4 -14.9 16.8 29.2 62 482 A E + 0 0 152 -28,-0.1 2,-0.5 -25,-0.1 5,-0.1 -0.900 4.0 170.2-140.7 108.1 -12.8 13.7 29.4 63 483 A V > - 0 0 15 3,-0.3 3,-2.1 -2,-0.3 5,-0.1 -0.981 38.7-117.7-118.6 118.4 -12.2 11.7 26.3 64 484 A A T 3 S+ 0 0 100 -2,-0.5 3,-0.1 1,-0.3 -2,-0.0 -0.288 96.3 8.3 -56.5 128.0 -9.6 8.9 26.6 65 485 A G T 3 S+ 0 0 71 1,-0.2 2,-0.5 -2,-0.0 -1,-0.3 0.375 105.1 109.3 85.4 -3.9 -6.6 9.5 24.5 66 486 A L < - 0 0 21 -3,-2.1 2,-0.8 2,-0.1 -3,-0.3 -0.896 63.2-141.5-106.1 129.2 -7.6 13.0 23.4 67 487 A R E +C 22 0B 140 -45,-1.8 -46,-2.2 -2,-0.5 -45,-0.5 -0.843 33.1 165.2 -88.6 114.0 -5.8 16.1 24.6 68 488 A L E +C 20 0B 15 -2,-0.8 -48,-0.2 -48,-0.2 -5,-0.1 -0.904 5.3 160.7-134.9 99.8 -8.6 18.5 25.2 69 489 A E E -C 19 0B 110 -50,-1.9 -50,-3.3 -2,-0.4 3,-0.1 -0.843 48.7 -87.4-122.1 153.4 -7.7 21.6 27.3 70 490 A P E -C 18 0B 68 0, 0.0 -52,-0.3 0, 0.0 2,-0.1 -0.364 54.8-109.9 -56.4 134.6 -9.2 25.0 27.7 71 491 A A - 0 0 17 -54,-2.6 -54,-0.1 1,-0.1 3,-0.1 -0.457 27.2-169.4 -68.7 143.4 -7.9 27.3 25.0 72 492 A R S S+ 0 0 235 1,-0.4 2,-0.3 -2,-0.1 -1,-0.1 0.707 74.1 6.2 -97.0 -32.8 -5.5 30.1 26.0 73 493 A R - 0 0 179 2,-0.1 2,-0.7 0, 0.0 -1,-0.4 -0.991 65.0-128.7-152.0 146.4 -5.4 31.9 22.7 74 494 A V + 0 0 53 -2,-0.3 2,-0.3 -3,-0.1 3,-0.1 -0.913 51.1 140.3 -99.4 112.7 -7.2 31.7 19.4 75 495 A E + 0 0 120 -2,-0.7 -26,-0.3 1,-0.1 -27,-0.2 -0.961 44.2 31.9-147.1 163.1 -4.7 31.6 16.6 76 496 A G - 0 0 31 -2,-0.3 -28,-1.8 1,-0.2 -1,-0.1 0.759 69.5-179.8 61.9 27.4 -3.9 30.0 13.3 77 497 A L B -F 47 0B 71 -30,-0.2 -30,-0.3 1,-0.1 -1,-0.2 -0.362 19.3-172.9 -60.6 139.6 -7.5 29.7 12.3 78 498 A L + 0 0 99 -32,-2.6 2,-0.3 1,-0.2 -31,-0.2 0.462 69.4 11.3-107.0 -10.5 -8.1 28.1 8.9 79 499 A E S S- 0 0 75 -33,-0.7 -1,-0.2 3,-0.0 3,-0.1 -0.981 88.4 -80.8-161.6 159.6 -11.9 28.7 8.8 80 500 A I - 0 0 133 -2,-0.3 2,-0.3 1,-0.1 -34,-0.2 -0.351 54.9 -98.2 -63.4 149.3 -14.7 30.6 10.4 81 501 A P + 0 0 28 0, 0.0 2,-0.3 0, 0.0 -36,-0.2 -0.564 59.0 165.0 -62.5 130.4 -16.2 29.1 13.6 82 502 A S B -E 44 0B 50 -38,-2.2 -38,-2.4 -2,-0.3 2,-0.1 -0.990 40.5-102.0-150.5 155.7 -19.3 27.3 12.6 83 503 A R - 0 0 172 -2,-0.3 -40,-0.1 -40,-0.2 2,-0.1 -0.472 47.9-103.2 -73.4 148.7 -21.8 24.8 14.0 84 504 A T - 0 0 50 -42,-0.4 2,-0.3 -43,-0.2 -1,-0.1 -0.450 41.7-104.5 -70.0 146.7 -21.4 21.2 12.7 85 505 A R - 0 0 189 -2,-0.1 -1,-0.1 -3,-0.1 5,-0.1 -0.555 26.7-131.8 -73.8 134.6 -23.9 20.2 10.0 86 506 A R > - 0 0 145 -2,-0.3 3,-2.1 1,-0.1 4,-0.4 -0.554 31.2-106.6 -75.9 153.6 -26.7 17.9 11.1 87 507 A P G > S+ 0 0 117 0, 0.0 3,-1.3 0, 0.0 -1,-0.1 0.821 118.8 60.0 -55.9 -33.5 -27.2 15.0 8.7 88 508 A A G 3 S+ 0 0 86 1,-0.3 -3,-0.0 0, 0.0 0, 0.0 0.733 109.5 44.2 -64.4 -20.3 -30.4 16.5 7.2 89 509 A R G < 0 0 189 -3,-2.1 -1,-0.3 0, 0.0 -4,-0.0 0.362 360.0 360.0-106.8 1.2 -28.4 19.5 6.1 90 510 A A < 0 0 123 -3,-1.3 -4,-0.0 -4,-0.4 0, 0.0 -0.714 360.0 360.0-108.1 360.0 -25.5 17.6 4.8