==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 08-SEP-06 2IB1 . COMPND 2 MOLECULE: DEATH DOMAIN CONTAINING MEMBRANE PROTEIN NRADD; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.VILAR,T.C.SUNG,K.F.LEE,R.RIEK . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6511.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 62.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 17.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 31 34.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 138 A P 0 0 104 0, 0.0 4,-0.1 0, 0.0 48,-0.1 0.000 360.0 360.0 360.0 -66.1 -2.8 10.4 2.7 2 139 A Q >> + 0 0 113 1,-0.2 3,-3.1 2,-0.2 4,-2.5 0.963 360.0 52.3 -69.4 -50.9 0.0 10.2 5.3 3 140 A Q H 3>>S+ 0 0 72 1,-0.3 4,-1.8 2,-0.2 5,-0.5 0.724 98.1 70.9 -57.0 -18.4 -2.1 8.3 7.8 4 141 A Q H 345S+ 0 0 63 3,-0.2 -1,-0.3 2,-0.2 -2,-0.2 0.624 111.3 28.2 -74.8 -11.4 -2.8 6.0 4.9 5 142 A Q H <>5S+ 0 0 13 -3,-3.1 4,-2.2 3,-0.2 -2,-0.2 0.695 118.4 54.9-114.2 -38.1 0.8 4.8 5.2 6 143 A E H <5S+ 0 0 40 -4,-2.5 -3,-0.2 2,-0.2 -2,-0.2 0.793 123.7 29.9 -65.9 -28.5 1.4 5.4 8.9 7 144 A E T ><5S+ 0 0 105 -4,-1.8 3,-1.0 -5,-0.3 -3,-0.2 0.841 119.7 51.5 -96.9 -45.1 -1.7 3.2 9.6 8 145 A V T 3>S+ 0 0 12 -4,-2.2 2,-1.9 1,-0.3 4,-0.8 0.762 87.5 81.0 -54.9 -23.7 2.0 -0.1 7.3 10 147 A R H <45S+ 0 0 174 -3,-1.0 -1,-0.3 1,-0.2 -2,-0.1 -0.266 95.2 42.2 -80.4 52.3 0.7 -1.3 10.7 11 148 A L H 45S+ 0 0 73 -2,-1.9 -1,-0.2 -3,-0.1 -2,-0.2 0.332 127.1 14.4-159.8 -39.9 -0.5 -4.6 9.2 12 149 A L H <5S+ 0 0 33 -4,-0.6 -3,-0.1 -3,-0.3 -2,-0.1 0.720 109.8 69.3-116.4 -42.8 2.1 -6.0 6.7 13 150 A M T ><5S+ 0 0 11 -4,-0.8 3,-3.3 -5,-0.2 2,-1.1 0.834 73.7 100.2 -48.0 -38.7 5.4 -4.1 7.3 14 151 A M T 3 S+ 0 0 130 3,-0.2 3,-1.7 -7,-0.1 2,-0.5 -0.316 89.4 27.8-108.3-167.6 3.9 -9.1 -0.6 20 157 A G T 3> S+ 0 0 4 1,-0.3 4,-2.6 2,-0.2 5,-0.2 -0.359 126.1 34.5 57.0-104.6 1.8 -5.9 -0.4 21 158 A W H 3> S+ 0 0 10 -2,-0.5 4,-1.1 1,-0.2 -1,-0.3 0.843 126.4 46.1 -46.9 -38.2 4.3 -3.1 -0.9 22 159 A Q H X> S+ 0 0 57 -3,-1.7 4,-0.7 2,-0.2 3,-0.6 0.944 109.2 51.6 -71.8 -49.0 6.2 -5.5 -3.2 23 160 A E H >> S+ 0 0 59 1,-0.2 3,-0.7 2,-0.2 4,-0.7 0.822 104.6 61.0 -57.4 -29.4 3.1 -6.6 -5.1 24 161 A L H >X S+ 0 0 19 -4,-2.6 4,-3.6 1,-0.2 3,-1.7 0.911 90.5 66.1 -62.9 -43.6 2.4 -2.8 -5.6 25 162 A A H S+ 0 0 11 -4,-1.1 5,-2.2 -3,-0.6 4,-1.5 0.813 93.6 62.3 -48.3 -31.8 5.7 -2.5 -7.5 26 163 A G H <<5S+ 0 0 71 -4,-0.7 -1,-0.3 -3,-0.7 -2,-0.2 0.890 118.0 25.9 -61.9 -39.7 4.1 -4.6 -10.1 27 164 A H H <<5S+ 0 0 70 -3,-1.7 -2,-0.2 -4,-0.7 -1,-0.2 0.670 117.8 62.0 -94.3 -24.0 1.4 -2.0 -10.7 28 165 A L H <5S- 0 0 28 -4,-3.6 -3,-0.2 -5,-0.1 -2,-0.2 0.667 109.0-120.1 -75.9 -19.0 3.6 0.9 -9.5 29 166 A G T <5 + 0 0 61 -4,-1.5 -3,-0.2 -5,-0.3 -4,-0.1 0.836 63.2 144.2 81.3 33.8 6.1 0.2 -12.3 30 167 A Y < - 0 0 62 -5,-2.2 2,-0.3 -6,-0.1 -1,-0.1 -0.004 40.4-124.6 -88.7-163.6 9.0 -0.4 -10.0 31 168 A Q >> - 0 0 106 1,-0.1 4,-3.9 -2,-0.0 3,-1.1 -0.987 20.8-114.2-147.3 154.3 11.9 -2.9 -10.3 32 169 A A H 3> S+ 0 0 67 -2,-0.3 4,-2.7 1,-0.3 5,-0.2 0.882 115.8 61.0 -55.3 -40.4 13.5 -5.7 -8.2 33 170 A E H 34 S+ 0 0 162 1,-0.2 4,-0.4 2,-0.2 -1,-0.3 0.842 118.0 30.7 -56.3 -32.9 16.7 -3.6 -7.8 34 171 A A H <> S+ 0 0 18 -3,-1.1 4,-4.1 2,-0.2 3,-0.3 0.790 113.8 60.4 -95.1 -33.2 14.4 -1.0 -6.1 35 172 A V H X S+ 0 0 14 -4,-3.9 4,-1.1 1,-0.2 -2,-0.2 0.819 103.0 55.7 -62.9 -27.8 12.0 -3.5 -4.6 36 173 A E H < S+ 0 0 151 -4,-2.7 -1,-0.2 -5,-0.3 -2,-0.2 0.857 116.1 35.5 -71.1 -35.7 15.0 -5.0 -2.8 37 174 A T H >4 S+ 0 0 72 -4,-0.4 3,-3.1 -3,-0.3 -2,-0.2 0.864 104.4 70.2 -84.6 -41.2 15.7 -1.5 -1.3 38 175 A M H >< S+ 0 0 1 -4,-4.1 3,-1.7 1,-0.3 9,-0.2 0.863 91.8 61.2 -43.5 -45.0 12.1 -0.4 -0.8 39 176 A A T 3< S+ 0 0 20 -4,-1.1 -1,-0.3 1,-0.3 -2,-0.2 0.745 120.5 25.9 -56.1 -24.6 11.7 -3.0 2.0 40 177 A C T < S+ 0 0 115 -3,-3.1 2,-0.8 -4,-0.1 -1,-0.3 0.046 92.8 108.0-128.7 25.5 14.5 -1.1 3.8 41 178 A D S < S- 0 0 64 -3,-1.7 6,-0.3 -4,-0.2 -1,-0.1 -0.692 112.9 -59.7-106.3 78.4 14.1 2.4 2.4 42 179 A Q S S- 0 0 173 -2,-0.8 5,-0.3 4,-0.1 -1,-0.1 0.875 113.5 -44.9 50.0 39.8 12.6 4.4 5.3 43 180 A M > - 0 0 60 3,-0.2 4,-3.3 -5,-0.1 5,-0.3 0.648 58.2-120.6 73.2 127.4 9.7 1.9 5.1 44 181 A P H > S+ 0 0 0 0, 0.0 4,-1.5 0, 0.0 7,-0.2 0.900 113.8 45.2 -64.0 -42.4 8.2 0.9 1.8 45 182 A A H > S+ 0 0 14 2,-0.2 4,-0.5 1,-0.2 -39,-0.1 0.857 118.3 44.1 -70.5 -35.6 4.7 2.1 2.7 46 183 A Y H >4 S+ 0 0 102 1,-0.2 3,-0.9 2,-0.2 4,-0.4 0.946 118.0 41.6 -73.9 -50.5 6.1 5.4 4.2 47 184 A T H >X S+ 0 0 16 -4,-3.3 4,-4.2 -6,-0.3 3,-1.4 0.775 97.0 82.6 -67.8 -25.0 8.5 6.1 1.3 48 185 A L H 3X>S+ 0 0 18 -4,-1.5 4,-2.9 -5,-0.3 5,-1.0 0.849 84.0 59.2 -46.4 -41.8 5.8 5.0 -1.1 49 186 A L H <<5S+ 0 0 37 -3,-0.9 4,-0.4 -4,-0.5 6,-0.4 0.872 119.4 28.5 -59.2 -36.2 4.3 8.5 -0.9 50 187 A R H <>5S+ 0 0 129 -3,-1.4 4,-2.0 -4,-0.4 -2,-0.2 0.783 126.7 47.1 -92.7 -31.2 7.6 10.0 -2.1 51 188 A N H <5S+ 0 0 46 -4,-4.2 -3,-0.2 2,-0.2 -2,-0.2 0.971 119.4 36.2 -73.2 -57.4 8.6 6.9 -4.2 52 189 A W T <5S+ 0 0 22 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.1 0.911 127.2 40.3 -63.1 -42.6 5.3 6.3 -6.0 53 190 A A T 4 S+ 0 0 117 -2,-0.3 3,-1.5 1,-0.2 5,-0.3 -0.281 84.3 66.8 68.4 -60.3 -1.9 13.3 -5.5 59 196 A R T 3 S+ 0 0 156 -2,-3.2 -1,-0.2 1,-0.3 4,-0.1 0.892 113.9 29.0 -57.8 -43.0 -1.2 12.2 -9.1 60 197 A A T 3 S+ 0 0 5 -11,-0.1 -1,-0.3 4,-0.1 2,-0.2 -0.135 122.7 60.2-109.3 34.7 -0.7 8.5 -8.1 61 198 A T S X S+ 0 0 22 -3,-1.5 2,-3.6 3,-0.2 3,-1.5 -0.754 76.2 45.5-143.0-170.5 -3.0 8.8 -5.0 62 199 A L T 3 S+ 0 0 136 1,-0.3 4,-0.1 -2,-0.2 -3,-0.1 -0.270 136.5 11.5 66.3 -60.3 -6.6 9.4 -3.9 63 200 A R T 3> S+ 0 0 178 -2,-3.6 4,-1.2 -5,-0.3 -1,-0.3 0.625 127.7 58.0-116.0 -28.3 -8.0 7.2 -6.7 64 201 A V H <> S+ 0 0 38 -3,-1.5 4,-3.5 -6,-0.3 5,-0.3 0.820 95.2 67.3 -73.7 -31.6 -4.7 5.5 -7.9 65 202 A L H > S+ 0 0 52 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.916 103.6 43.3 -54.1 -49.2 -4.0 4.1 -4.5 66 203 A E H > S+ 0 0 104 2,-0.2 4,-3.8 1,-0.2 5,-0.3 0.921 116.4 47.5 -65.4 -44.0 -7.1 1.8 -4.6 67 204 A D H X S+ 0 0 88 -4,-1.2 4,-3.6 2,-0.2 5,-0.3 0.966 110.8 50.7 -60.2 -54.5 -6.4 0.8 -8.2 68 205 A A H < S+ 0 0 1 -4,-3.5 -1,-0.2 1,-0.2 -41,-0.2 0.800 122.0 34.5 -53.7 -32.9 -2.7 0.1 -7.5 69 206 A L H X>S+ 0 0 14 -4,-1.5 5,-3.1 -5,-0.3 4,-1.1 0.778 121.9 45.3 -93.5 -32.8 -3.7 -2.1 -4.6 70 207 A A H <5S+ 0 0 48 -4,-3.8 -3,-0.2 3,-0.2 -2,-0.2 0.872 100.8 65.1 -79.8 -38.6 -6.9 -3.6 -6.0 71 208 A A T <5S+ 0 0 70 -4,-3.6 -1,-0.2 -5,-0.3 -3,-0.1 0.774 117.1 31.8 -54.8 -24.8 -5.6 -4.4 -9.5 72 209 A I T 45S- 0 0 59 -5,-0.3 -1,-0.2 -4,-0.2 -2,-0.2 0.665 118.5-110.3-103.1 -25.7 -3.3 -6.9 -7.6 73 210 A G T <5 + 0 0 38 -4,-1.1 -3,-0.2 1,-0.1 3,-0.1 0.904 63.5 145.2 93.8 55.1 -5.7 -7.8 -4.7 74 211 A R >>< + 0 0 57 -5,-3.1 3,-0.6 -8,-0.2 4,-0.6 -0.329 18.5 126.2-121.0 52.9 -4.2 -6.2 -1.7 75 212 A E H 3> + 0 0 85 1,-0.2 4,-3.5 2,-0.2 5,-0.4 0.341 41.1 109.4 -87.9 8.1 -7.2 -5.0 0.4 76 213 A D H 34 S+ 0 0 90 1,-0.2 4,-0.5 2,-0.2 -1,-0.2 0.806 94.9 23.0 -51.2 -33.9 -5.6 -7.0 3.3 77 214 A V H <> S+ 0 0 11 -3,-0.6 4,-4.2 2,-0.2 5,-0.3 0.793 118.1 60.7-102.0 -41.3 -4.9 -3.6 4.9 78 215 A V H X S+ 0 0 23 -4,-0.6 4,-2.6 1,-0.2 -2,-0.2 0.900 106.9 50.5 -53.0 -41.5 -7.5 -1.5 3.2 79 216 A Q H < S+ 0 0 121 -4,-3.5 -1,-0.2 2,-0.2 -2,-0.2 0.950 114.0 43.0 -61.1 -50.5 -10.1 -3.8 4.7 80 217 A V H >4 S+ 0 0 69 -4,-0.5 3,-2.0 -5,-0.4 -2,-0.2 0.940 114.3 50.5 -60.7 -49.3 -8.5 -3.4 8.2 81 218 A L H 3< S+ 0 0 63 -4,-4.2 -1,-0.2 1,-0.3 -2,-0.2 0.878 116.4 41.8 -56.8 -40.3 -8.0 0.4 7.7 82 219 A S T 3< S+ 0 0 90 -4,-2.6 -1,-0.3 -5,-0.3 -2,-0.2 0.051 126.2 35.1 -96.4 25.2 -11.7 0.7 6.6 83 220 A S < + 0 0 77 -3,-2.0 -1,-0.2 -5,-0.0 -2,-0.1 -0.164 63.3 150.5-173.2 63.7 -12.9 -1.7 9.4 84 221 A P - 0 0 111 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.986 67.5 -47.1 -66.7 -62.1 -10.9 -1.5 12.7 85 222 A A - 0 0 92 2,-0.0 2,-0.4 -5,-0.0 -5,-0.0 -0.949 46.6-114.3-172.9 153.8 -13.6 -2.5 15.3 86 223 A E + 0 0 186 -2,-0.3 2,-0.3 -3,-0.1 -3,-0.0 -0.798 55.6 104.2-100.6 138.8 -17.2 -1.9 16.3 87 224 A S + 0 0 113 -2,-0.4 -2,-0.0 3,-0.2 0, 0.0 -0.963 41.5 55.7 179.0-168.0 -18.1 -0.3 19.7 88 225 A S S S- 0 0 109 -2,-0.3 2,-0.3 1,-0.1 3,-0.1 -0.290 93.1 -61.0 59.2-140.0 -19.3 2.9 21.4 89 226 A S S S- 0 0 98 1,-0.2 -1,-0.1 2,-0.1 0, 0.0 -0.973 89.7 -7.8-148.4 130.5 -22.6 4.2 20.1 90 227 A V 0 0 139 -2,-0.3 -1,-0.2 1,-0.1 -3,-0.2 0.121 360.0 360.0 72.0 168.7 -23.7 5.5 16.6 91 228 A V 0 0 207 -3,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.973 360.0 360.0 -75.4 360.0 -21.4 6.1 13.6