==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER APOPTOSIS 01-APR-01 1ICH . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.F.SUKITS,L.-L.LIN,K.MALAKIAN,R.POWERS,G.-Y.XU . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6135.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 64 73.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 52 59.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 327 A P > 0 0 97 0, 0.0 4,-2.0 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -46.7 2.6 1.6 10.8 2 328 A A H > + 0 0 48 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.932 360.0 52.6 -57.0 -41.9 5.7 3.7 10.1 3 329 A T H > S+ 0 0 19 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.915 104.8 56.3 -60.0 -39.5 6.4 1.5 7.0 4 330 A L H > S+ 0 0 9 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.939 105.0 51.0 -60.0 -43.3 2.8 2.1 5.9 5 331 A Y H X S+ 0 0 125 -4,-2.0 4,-1.9 1,-0.2 5,-0.2 0.927 110.6 50.5 -60.4 -40.1 3.5 5.9 6.0 6 332 A A H X S+ 0 0 5 -4,-2.0 4,-3.7 1,-0.2 5,-0.4 0.957 110.2 47.7 -63.1 -48.9 6.6 5.3 3.9 7 333 A V H X S+ 0 0 0 -4,-2.8 4,-2.2 1,-0.2 -1,-0.2 0.916 109.2 55.0 -60.4 -39.8 4.7 3.2 1.3 8 334 A V H < S+ 0 0 6 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.915 119.3 32.9 -60.4 -40.5 2.0 5.9 1.1 9 335 A E H < S+ 0 0 120 -4,-1.9 -2,-0.2 -5,-0.2 -3,-0.2 0.935 120.4 47.3 -82.6 -51.1 4.7 8.5 0.3 10 336 A N H < S+ 0 0 27 -4,-3.7 -3,-0.2 -5,-0.2 -2,-0.2 0.909 105.3 68.2 -59.8 -40.0 7.1 6.4 -1.7 11 337 A V S < S- 0 0 1 -4,-2.2 5,-0.1 -5,-0.4 59,-0.0 -0.648 97.4-108.5 -83.9 138.4 4.4 4.9 -3.8 12 338 A P - 0 0 27 0, 0.0 7,-0.1 0, 0.0 -1,-0.1 -0.292 17.6-144.8 -63.7 147.7 2.6 7.3 -6.2 13 339 A P S > S+ 0 0 66 0, 0.0 3,-1.3 0, 0.0 4,-0.5 0.915 94.8 51.6 -80.7 -49.7 -1.0 8.3 -5.3 14 340 A L T 3 S+ 0 0 152 1,-0.3 3,-0.4 2,-0.1 4,-0.2 0.927 120.6 35.0 -56.9 -43.9 -2.5 8.6 -8.9 15 341 A R T 3> S+ 0 0 135 1,-0.2 4,-2.6 2,-0.1 5,-0.3 0.364 87.5 109.8 -91.3 7.3 -1.2 5.1 -9.8 16 342 A W H <> S+ 0 0 15 -3,-1.3 4,-3.6 1,-0.2 5,-0.3 0.937 73.9 55.2 -49.1 -49.9 -1.8 3.8 -6.3 17 343 A K H > S+ 0 0 76 -4,-0.5 4,-3.5 -3,-0.4 -1,-0.2 0.940 108.0 48.9 -51.8 -45.6 -4.7 1.6 -7.5 18 344 A E H > S+ 0 0 113 -3,-0.3 4,-2.5 2,-0.2 5,-0.3 0.965 111.7 48.8 -59.9 -44.6 -2.5 0.0 -10.0 19 345 A F H X S+ 0 0 0 -4,-2.6 4,-1.3 1,-0.2 -2,-0.2 0.923 112.1 49.8 -59.5 -38.9 0.1 -0.5 -7.2 20 346 A V H X>S+ 0 0 0 -4,-3.6 4,-1.5 -5,-0.3 5,-0.9 0.922 105.4 55.8 -66.8 -40.2 -2.8 -1.9 -5.3 21 347 A K H <5S+ 0 0 103 -4,-3.5 3,-0.5 1,-0.3 -2,-0.2 0.937 107.9 48.9 -59.2 -40.0 -3.8 -4.2 -8.2 22 348 A R H <5S+ 0 0 158 -4,-2.5 -1,-0.3 1,-0.2 -2,-0.2 0.830 101.0 66.4 -67.2 -27.8 -0.2 -5.6 -8.1 23 349 A L H <5S- 0 0 8 -4,-1.3 -1,-0.2 -5,-0.3 -2,-0.2 0.908 106.7-130.0 -60.5 -38.0 -0.8 -6.0 -4.3 24 350 A G T <5 + 0 0 62 -4,-1.5 -3,-0.1 -3,-0.5 -2,-0.1 0.541 54.5 146.9 100.0 8.8 -3.4 -8.6 -5.1 25 351 A L < - 0 0 19 -5,-0.9 -1,-0.3 1,-0.2 5,-0.1 -0.400 66.9 -74.0 -74.4 156.1 -6.2 -7.2 -2.9 26 352 A S > - 0 0 65 1,-0.2 4,-1.5 2,-0.1 -1,-0.2 -0.228 41.7-140.6 -49.8 127.0 -9.8 -7.6 -4.1 27 353 A D H > S+ 0 0 71 1,-0.2 4,-1.3 2,-0.2 3,-0.2 0.926 100.5 51.9 -60.2 -43.1 -10.3 -5.2 -7.0 28 354 A H H > S+ 0 0 146 1,-0.2 4,-1.9 2,-0.2 3,-0.3 0.924 105.0 55.0 -62.8 -40.6 -13.8 -4.2 -5.9 29 355 A E H > S+ 0 0 22 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.886 101.1 61.7 -60.0 -33.7 -12.7 -3.5 -2.3 30 356 A I H X S+ 0 0 14 -4,-1.5 4,-0.7 1,-0.2 3,-0.4 0.928 104.2 46.4 -59.7 -42.5 -10.1 -1.1 -3.9 31 357 A D H >X S+ 0 0 83 -4,-1.3 3,-0.9 -3,-0.3 4,-0.7 0.914 109.2 55.6 -66.3 -39.6 -13.0 1.0 -5.4 32 358 A R H 3X S+ 0 0 179 -4,-1.9 4,-1.9 1,-0.2 -1,-0.2 0.759 90.6 75.0 -65.0 -23.1 -14.8 0.9 -2.0 33 359 A L H 3X S+ 0 0 18 -4,-1.4 4,-1.3 -3,-0.4 -1,-0.2 0.917 90.7 55.9 -58.2 -39.9 -11.7 2.4 -0.3 34 360 A E H X< S+ 0 0 151 -3,-0.9 3,-0.5 -4,-0.7 4,-0.3 0.940 105.4 51.5 -59.6 -43.0 -12.5 5.8 -1.7 35 361 A L H 3< S+ 0 0 152 -4,-0.7 3,-0.3 1,-0.2 -1,-0.2 0.903 100.1 63.9 -60.9 -38.6 -16.0 5.6 -0.1 36 362 A Q H 3< S- 0 0 101 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.905 135.7 -29.3 -54.1 -39.6 -14.4 4.8 3.3 37 363 A N << + 0 0 34 -4,-1.3 3,-0.3 -3,-0.5 -1,-0.2 -0.332 62.4 162.9 180.0 90.9 -12.7 8.2 3.2 38 364 A G + 0 0 46 -4,-0.3 3,-0.2 -3,-0.3 -3,-0.1 0.585 66.7 86.7 -92.1 -9.3 -11.7 10.2 0.0 39 365 A R S S+ 0 0 214 1,-0.2 2,-0.6 -5,-0.2 -1,-0.2 0.870 97.3 39.3 -58.6 -32.2 -11.4 13.5 1.9 40 366 A C > - 0 0 63 -3,-0.3 4,-2.3 1,-0.2 -1,-0.2 -0.914 68.2-165.4-121.2 107.8 -7.8 12.5 2.7 41 367 A L H > S+ 0 0 98 -2,-0.6 4,-3.1 1,-0.2 5,-0.4 0.928 95.3 53.9 -58.6 -40.1 -5.9 10.7 -0.1 42 368 A R H > S+ 0 0 125 1,-0.2 4,-3.6 2,-0.2 5,-0.2 0.935 107.3 51.6 -60.2 -40.6 -3.2 9.6 2.4 43 369 A E H > S+ 0 0 68 2,-0.2 4,-2.1 3,-0.2 -1,-0.2 0.917 111.7 47.2 -62.0 -40.5 -6.1 8.1 4.5 44 370 A A H X S+ 0 0 15 -4,-2.3 4,-1.6 2,-0.2 -2,-0.2 0.986 116.5 41.1 -66.0 -54.9 -7.3 6.3 1.4 45 371 A Q H X S+ 0 0 10 -4,-3.1 4,-1.8 1,-0.3 3,-0.3 0.932 116.2 52.0 -59.4 -39.0 -3.9 5.0 0.4 46 372 A Y H X S+ 0 0 47 -4,-3.6 4,-3.7 -5,-0.4 5,-0.4 0.870 100.2 63.6 -65.1 -31.3 -3.3 4.4 4.1 47 373 A S H X>S+ 0 0 7 -4,-2.1 4,-3.2 -5,-0.2 5,-0.6 0.924 102.2 49.8 -59.3 -39.6 -6.6 2.4 4.1 48 374 A M H X5S+ 0 0 0 -4,-1.6 4,-2.0 -3,-0.3 5,-0.2 0.975 117.1 38.7 -62.6 -52.5 -5.0 -0.0 1.7 49 375 A L H X5S+ 0 0 0 -4,-1.8 4,-0.9 2,-0.2 -2,-0.2 0.849 126.8 38.3 -67.9 -31.9 -1.9 -0.4 4.0 50 376 A A H X5S+ 0 0 25 -4,-3.7 4,-1.7 -5,-0.2 -3,-0.2 0.947 119.9 42.6 -84.2 -54.6 -4.0 -0.3 7.1 51 377 A T H X>S+ 0 0 26 -4,-3.2 4,-3.5 -5,-0.4 5,-0.6 0.894 110.1 60.9 -58.9 -37.3 -7.1 -2.3 5.9 52 378 A W H X + 0 0 43 -2,-0.3 4,-1.7 3,-0.1 5,-0.2 0.862 50.6 155.1 71.8 34.2 6.0 -9.0 6.7 62 388 A T H > S+ 0 0 23 1,-0.2 4,-1.7 2,-0.2 3,-0.2 0.962 77.5 46.9 -60.0 -45.0 3.1 -6.8 5.5 63 389 A L H > S+ 0 0 29 1,-0.2 4,-3.9 2,-0.2 -1,-0.2 0.848 102.2 68.1 -64.3 -30.4 5.8 -4.6 3.7 64 390 A E H > S+ 0 0 107 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.963 102.5 42.6 -55.9 -50.3 7.3 -7.8 2.4 65 391 A L H X S+ 0 0 32 -4,-1.7 4,-1.8 1,-0.2 -1,-0.2 0.937 117.3 48.7 -61.9 -40.3 4.3 -8.5 0.2 66 392 A L H X S+ 0 0 0 -4,-1.7 4,-2.4 -5,-0.2 -2,-0.2 0.890 106.8 56.1 -65.2 -38.3 4.4 -4.8 -0.7 67 393 A G H X S+ 0 0 11 -4,-3.9 4,-2.8 2,-0.2 5,-0.2 0.945 105.1 51.0 -61.2 -45.7 8.1 -4.9 -1.4 68 394 A R H X S+ 0 0 154 -4,-2.3 4,-2.5 1,-0.2 5,-0.2 0.926 109.1 52.0 -59.5 -39.4 7.6 -7.7 -4.0 69 395 A V H X S+ 0 0 7 -4,-1.8 4,-2.1 -5,-0.2 -1,-0.2 0.935 108.8 51.3 -61.6 -41.5 4.9 -5.5 -5.6 70 396 A L H <>S+ 0 0 0 -4,-2.4 5,-4.2 2,-0.2 6,-0.4 0.943 108.1 50.8 -61.1 -46.4 7.5 -2.7 -5.6 71 397 A R H ><5S+ 0 0 148 -4,-2.8 3,-1.7 3,-0.3 -1,-0.2 0.945 109.5 50.3 -59.3 -45.1 10.1 -4.9 -7.3 72 398 A D H 3<5S+ 0 0 110 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.907 116.0 43.1 -59.8 -37.8 7.5 -5.9 -10.0 73 399 A M T 3<5S- 0 0 45 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.306 118.7-113.2 -90.1 11.2 6.8 -2.2 -10.5 74 400 A D T < 5S+ 0 0 143 -3,-1.7 3,-0.3 -5,-0.1 -3,-0.3 0.929 77.1 133.9 60.1 41.5 10.6 -1.4 -10.4 75 401 A L >>< + 0 0 27 -5,-4.2 4,-2.3 -8,-0.2 3,-0.6 0.112 19.8 120.6-108.1 21.6 10.0 0.5 -7.1 76 402 A L H 3> S+ 0 0 68 -6,-0.4 4,-2.2 1,-0.3 5,-0.2 0.882 74.3 56.8 -54.0 -35.2 13.0 -1.1 -5.3 77 403 A G H 3> S+ 0 0 49 -3,-0.3 4,-1.6 1,-0.2 -1,-0.3 0.912 106.5 49.7 -63.8 -37.8 14.4 2.5 -4.9 78 404 A C H <> S+ 0 0 29 -3,-0.6 4,-3.3 2,-0.2 5,-0.3 0.931 107.3 53.1 -67.3 -43.5 11.2 3.4 -3.1 79 405 A L H X S+ 0 0 27 -4,-2.3 4,-4.2 1,-0.2 5,-0.3 0.934 105.7 54.6 -59.6 -41.0 11.4 0.3 -0.8 80 406 A E H X S+ 0 0 115 -4,-2.2 4,-2.0 -5,-0.2 -1,-0.2 0.929 111.1 45.4 -59.5 -38.9 15.0 1.4 0.2 81 407 A D H X S+ 0 0 74 -4,-1.6 4,-1.5 2,-0.2 -2,-0.2 0.949 114.9 47.1 -68.7 -43.8 13.5 4.8 1.2 82 408 A I H X S+ 0 0 0 -4,-3.3 4,-1.6 1,-0.2 3,-0.3 0.933 109.3 54.9 -61.4 -42.2 10.6 3.0 3.0 83 409 A E H X S+ 0 0 111 -4,-4.2 4,-1.6 -5,-0.3 -1,-0.2 0.922 102.7 56.3 -58.4 -40.2 13.2 0.8 4.6 84 410 A E H < S+ 0 0 131 -4,-2.0 -1,-0.3 -5,-0.3 -2,-0.2 0.892 99.5 60.9 -60.1 -35.4 15.0 3.9 5.8 85 411 A A H < S+ 0 0 53 -4,-1.5 -1,-0.2 -3,-0.3 -2,-0.2 0.960 104.3 47.7 -56.9 -48.1 11.7 4.9 7.5 86 412 A L H < 0 0 93 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.849 360.0 360.0 -62.0 -30.2 11.9 1.7 9.6 87 413 A C < 0 0 133 -4,-1.6 -1,-0.2 -5,-0.2 -4,-0.0 -0.690 360.0 360.0-101.1 360.0 15.5 2.6 10.4