==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 15-AUG-96 1IDY . COMPND 2 MOLECULE: MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.FURUKAWA,M.ODA,H.NAKAMURA . 54 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4617.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 72.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 14.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 42.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 140 A M 0 0 209 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -66.0 -1.0 -8.7 -1.9 2 141 A E - 0 0 148 2,-0.1 3,-0.0 1,-0.0 0, 0.0 0.926 360.0-114.7 64.4 100.8 1.2 -9.8 -4.9 3 142 A V - 0 0 103 1,-0.1 2,-1.6 0, 0.0 -1,-0.0 -0.290 37.8 -92.6 -62.9 147.7 4.0 -12.2 -3.8 4 143 A K - 0 0 194 2,-0.0 2,-0.2 3,-0.0 -1,-0.1 -0.458 58.4-176.6 -65.1 89.4 7.6 -10.9 -4.1 5 144 A K - 0 0 104 -2,-1.6 2,-1.9 1,-0.1 -1,-0.0 -0.543 41.4 -93.8 -89.1 156.7 8.3 -12.3 -7.6 6 145 A T - 0 0 88 -2,-0.2 2,-1.3 1,-0.2 -1,-0.1 -0.505 44.9-176.6 -70.5 84.3 11.7 -12.0 -9.4 7 146 A S + 0 0 83 -2,-1.9 2,-0.4 2,-0.0 -1,-0.2 -0.180 31.7 137.4 -80.8 44.2 10.8 -8.8 -11.2 8 147 A W - 0 0 41 -2,-1.3 2,-0.2 37,-0.0 -2,-0.0 -0.750 50.2-130.9 -91.9 138.8 14.1 -8.9 -13.1 9 148 A T > - 0 0 66 -2,-0.4 4,-2.2 1,-0.1 5,-0.2 -0.533 18.3-119.6 -85.5 155.4 14.2 -8.1 -16.8 10 149 A E H > S+ 0 0 135 1,-0.2 4,-2.6 2,-0.2 -1,-0.1 0.862 116.0 56.6 -60.3 -35.7 16.0 -10.3 -19.3 11 150 A E H > S+ 0 0 135 2,-0.2 4,-2.6 1,-0.2 5,-0.3 0.939 105.8 48.5 -61.3 -49.6 18.1 -7.3 -20.2 12 151 A E H > S+ 0 0 40 1,-0.2 4,-2.7 2,-0.2 -2,-0.2 0.946 113.5 47.1 -55.2 -51.9 19.3 -6.8 -16.6 13 152 A D H X S+ 0 0 32 -4,-2.2 4,-2.7 2,-0.2 5,-0.3 0.890 110.5 54.2 -57.4 -42.0 20.1 -10.6 -16.3 14 153 A R H X S+ 0 0 106 -4,-2.6 4,-2.7 1,-0.2 -2,-0.2 0.968 113.0 40.4 -56.0 -57.7 21.9 -10.3 -19.7 15 154 A I H X S+ 0 0 70 -4,-2.6 4,-3.0 1,-0.2 5,-0.3 0.853 112.8 58.3 -60.6 -36.6 24.2 -7.5 -18.5 16 155 A L H X S+ 0 0 0 -4,-2.7 4,-2.6 -5,-0.3 -1,-0.2 0.954 111.7 38.6 -58.7 -53.6 24.5 -9.2 -15.1 17 156 A Y H X S+ 0 0 101 -4,-2.7 4,-1.6 2,-0.2 5,-0.3 0.912 116.4 52.1 -65.0 -44.4 26.0 -12.4 -16.6 18 157 A Q H X S+ 0 0 86 -4,-2.7 4,-2.2 -5,-0.3 3,-0.2 0.945 115.8 40.6 -56.4 -51.4 28.1 -10.5 -19.2 19 158 A A H X>S+ 0 0 6 -4,-3.0 4,-2.3 1,-0.2 5,-1.7 0.890 106.5 64.3 -65.1 -43.0 29.6 -8.2 -16.5 20 159 A H H <5S+ 0 0 45 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.869 116.7 27.3 -51.4 -43.9 30.0 -11.0 -14.0 21 160 A K H <5S+ 0 0 136 -4,-1.6 -1,-0.2 -3,-0.2 -2,-0.2 0.794 125.6 47.8 -90.6 -31.5 32.5 -12.9 -16.2 22 161 A R H <5S+ 0 0 213 -4,-2.2 -3,-0.2 -5,-0.3 -2,-0.2 0.978 130.2 19.3 -72.8 -58.4 33.9 -9.8 -18.1 23 162 A L T <5S- 0 0 63 -4,-2.3 2,-0.3 1,-0.3 -3,-0.2 0.912 111.8-128.5 -76.9 -45.9 34.5 -7.5 -15.2 24 163 A G < - 0 0 18 -5,-1.7 2,-0.6 1,-0.1 -1,-0.3 -0.790 49.4 -36.2 125.6-168.2 34.6 -10.3 -12.5 25 164 A N S S+ 0 0 121 -2,-0.3 2,-1.8 1,-0.2 3,-0.3 -0.044 87.3 132.3 -79.9 35.3 32.8 -10.9 -9.2 26 165 A R >> + 0 0 146 -2,-0.6 4,-2.7 1,-0.2 3,-1.2 -0.417 22.4 163.6 -85.1 59.8 33.1 -7.1 -8.6 27 166 A W H 3> S+ 0 0 36 -2,-1.8 4,-2.0 1,-0.3 -1,-0.2 0.852 71.1 58.9 -46.9 -43.0 29.4 -6.8 -7.6 28 167 A A H 34 S+ 0 0 93 -3,-0.3 -1,-0.3 1,-0.2 4,-0.2 0.888 113.7 37.0 -55.2 -42.6 30.1 -3.4 -6.1 29 168 A E H X> S+ 0 0 80 -3,-1.2 3,-1.6 1,-0.2 4,-0.5 0.827 108.8 62.9 -80.8 -34.0 31.4 -2.1 -9.5 30 169 A I H >X S+ 0 0 1 -4,-2.7 3,-1.7 1,-0.3 4,-1.6 0.874 95.0 61.8 -59.6 -36.1 28.8 -4.0 -11.5 31 170 A A H 3< S+ 0 0 26 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.727 87.8 73.2 -62.8 -19.5 26.0 -2.0 -9.8 32 171 A K H <4 S+ 0 0 140 -3,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.862 108.0 33.4 -59.6 -34.6 27.7 1.1 -11.4 33 172 A L H << S+ 0 0 104 -3,-1.7 -2,-0.2 -4,-0.5 -1,-0.2 0.724 127.4 43.2 -89.7 -27.7 26.2 -0.2 -14.6 34 173 A L S < S- 0 0 18 -4,-1.6 3,-0.3 -5,-0.1 -1,-0.2 -0.678 80.6-176.6-120.8 75.3 23.1 -1.6 -12.8 35 174 A P + 0 0 101 0, 0.0 2,-1.8 0, 0.0 3,-0.1 -0.143 65.6 32.4 -65.0 166.2 22.0 1.1 -10.3 36 175 A G S S+ 0 0 76 1,-0.1 2,-0.6 -5,-0.0 -5,-0.1 -0.305 93.6 100.9 81.6 -53.3 19.1 0.4 -7.9 37 176 A R - 0 0 60 -2,-1.8 -1,-0.1 -3,-0.3 -3,-0.1 -0.532 69.0-147.9 -67.1 112.5 19.9 -3.3 -7.8 38 177 A T > - 0 0 69 -2,-0.6 4,-2.9 1,-0.1 5,-0.2 -0.339 23.7-106.9 -79.4 164.4 21.8 -3.7 -4.4 39 178 A D H > S+ 0 0 75 1,-0.2 4,-3.1 2,-0.2 5,-0.3 0.929 121.2 50.1 -57.1 -48.7 24.6 -6.3 -4.0 40 179 A N H > S+ 0 0 99 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.888 113.7 46.0 -58.5 -40.9 22.4 -8.5 -1.8 41 180 A A H > S+ 0 0 25 2,-0.2 4,-2.6 3,-0.2 -1,-0.2 0.902 113.4 49.4 -68.5 -42.0 19.6 -8.4 -4.5 42 181 A I H X S+ 0 0 0 -4,-2.9 4,-2.8 2,-0.2 -2,-0.2 0.939 116.0 41.6 -61.9 -50.1 22.1 -9.0 -7.3 43 182 A K H X S+ 0 0 88 -4,-3.1 4,-2.9 2,-0.2 5,-0.3 0.885 113.1 53.4 -66.1 -40.4 23.6 -12.0 -5.5 44 183 A N H X S+ 0 0 103 -4,-2.4 4,-2.4 -5,-0.3 5,-0.2 0.928 114.6 42.7 -59.4 -43.6 20.2 -13.2 -4.4 45 184 A H H X>S+ 0 0 6 -4,-2.6 4,-2.8 2,-0.2 5,-0.8 0.883 113.7 52.3 -66.2 -41.7 19.2 -13.0 -8.1 46 185 A W H <>S+ 0 0 23 -4,-2.8 5,-3.0 3,-0.2 -2,-0.2 0.872 115.8 39.5 -64.8 -39.9 22.5 -14.6 -9.2 47 186 A N H <5S+ 0 0 91 -4,-2.9 -2,-0.2 3,-0.2 -1,-0.2 0.884 122.4 40.5 -77.9 -41.8 22.1 -17.6 -6.9 48 187 A S H <5S+ 0 0 67 -4,-2.4 -2,-0.2 -5,-0.3 -3,-0.2 0.905 129.5 24.0 -75.1 -44.8 18.4 -18.1 -7.3 49 188 A T T ><5S+ 0 0 47 -4,-2.8 3,-0.8 -5,-0.2 -3,-0.2 0.961 132.8 23.9 -87.8 -69.2 18.1 -17.5 -11.1 50 189 A M G >