==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 13-APR-01 1IFY . COMPND 2 MOLECULE: UV EXCISION REPAIR PROTEIN RAD23 HOMOLOG A; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.D.MUELLER,J.FEIGON . 49 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3682.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 67.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 26 53.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 156 A T 0 0 188 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 136.1 -10.3 14.8 -6.3 2 157 A L - 0 0 178 1,-0.0 2,-0.4 2,-0.0 3,-0.1 -0.203 360.0-136.6 -70.1 165.3 -9.3 14.0 -2.8 3 158 A V - 0 0 66 1,-0.1 -1,-0.0 3,-0.0 5,-0.0 -0.919 6.9-159.2-131.8 107.5 -9.5 10.5 -1.3 4 159 A T - 0 0 161 -2,-0.4 -1,-0.1 1,-0.1 -2,-0.0 0.876 64.6 -86.4 -48.6 -42.6 -10.8 10.0 2.2 5 160 A G S > S+ 0 0 21 -3,-0.1 4,-2.0 3,-0.0 5,-0.4 0.170 97.0 115.0 155.0 -20.8 -9.1 6.7 2.3 6 161 A S H >> S+ 0 0 92 1,-0.3 4,-1.7 2,-0.2 3,-0.6 0.900 85.5 41.2 -36.2 -79.0 -11.5 4.2 0.7 7 162 A E H 3> S+ 0 0 115 1,-0.2 4,-1.7 2,-0.2 -1,-0.3 0.819 111.0 64.1 -41.4 -36.8 -9.4 3.3 -2.3 8 163 A Y H >> S+ 0 0 48 -3,-0.4 4,-2.0 1,-0.3 3,-1.1 0.967 105.7 38.8 -53.0 -62.1 -6.5 3.3 0.1 9 164 A E H X S+ 0 0 35 -4,-2.0 4,-2.0 -5,-0.5 3,-0.9 0.999 92.8 51.5 -62.2 -69.1 -3.0 -7.7 0.5 17 172 A S H 3< S+ 0 0 117 -4,-2.4 2,-0.7 1,-0.3 -1,-0.2 0.799 99.8 72.7 -37.6 -30.3 -4.3 -11.0 -0.9 18 173 A M T 3< S- 0 0 90 -4,-1.3 -1,-0.3 2,-0.2 -2,-0.1 -0.075 131.7 -91.2 -79.0 35.5 -1.0 -10.8 -2.7 19 174 A G T <4 S+ 0 0 65 -3,-0.9 2,-0.2 -2,-0.7 -2,-0.2 0.925 93.7 123.1 55.3 48.2 0.8 -11.6 0.6 20 175 A Y < - 0 0 58 -4,-2.0 5,-0.2 -8,-0.2 -2,-0.2 -0.707 58.0-135.8-144.1 89.3 1.2 -8.0 1.5 21 176 A E >> - 0 0 75 -2,-0.2 4,-1.8 1,-0.1 3,-0.7 0.075 32.0-104.2 -39.4 151.0 -0.2 -6.8 4.9 22 177 A R H 3> S+ 0 0 101 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.778 120.8 54.1 -50.3 -33.5 -2.1 -3.5 4.8 23 178 A E H 3> S+ 0 0 104 2,-0.2 4,-2.0 3,-0.2 -1,-0.2 0.851 105.4 49.0 -75.3 -36.7 0.8 -1.9 6.4 24 179 A R H <> S+ 0 0 135 -3,-0.7 4,-0.6 2,-0.2 -2,-0.2 0.870 119.8 38.6 -70.0 -36.9 3.5 -2.9 3.9 25 180 A V H X S+ 0 0 0 -4,-1.8 4,-1.3 -5,-0.2 -2,-0.2 0.858 116.3 49.6 -82.4 -38.1 1.4 -1.8 1.0 26 181 A V H X S+ 0 0 25 -4,-2.1 4,-2.1 -5,-0.3 6,-0.2 0.913 114.6 45.4 -68.0 -39.3 0.0 1.3 2.6 27 182 A A H X S+ 0 0 34 -4,-2.0 4,-1.2 1,-0.3 -1,-0.2 0.834 110.8 54.4 -69.5 -28.3 3.5 2.3 3.6 28 183 A A H < S+ 0 0 0 -4,-0.6 -2,-0.3 2,-0.2 -1,-0.3 0.800 104.6 54.3 -72.5 -25.7 4.3 1.3 0.1 29 184 A L H X>S+ 0 0 1 -4,-1.3 5,-1.9 2,-0.3 4,-1.8 0.880 103.9 52.7 -73.3 -37.4 1.6 3.7 -0.9 30 185 A R H <5S+ 0 0 193 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.840 119.1 37.3 -63.9 -28.8 3.4 6.4 1.1 31 186 A A T <5S+ 0 0 24 -4,-1.2 -2,-0.3 -6,-0.2 -1,-0.3 0.470 118.5 50.1 -98.4 -6.0 6.3 5.3 -1.1 32 187 A S T 45S- 0 0 0 -3,-0.3 3,-0.5 -4,-0.3 -2,-0.2 0.473 113.8-110.5-107.1 -8.9 4.1 4.8 -4.2 33 188 A Y T <5S- 0 0 183 -4,-1.8 -3,-0.2 1,-0.2 -4,-0.1 0.598 78.1 -52.9 86.3 13.2 2.4 8.2 -4.0 34 189 A N S S+ 0 0 45 0, 0.0 4,-1.8 0, 0.0 5,-0.3 0.914 88.7 46.5 -91.0 -60.7 -1.7 0.4 -5.3 37 192 A H H >> S+ 0 0 147 1,-0.3 4,-2.4 2,-0.2 3,-0.6 0.915 120.3 42.3 -49.2 -47.3 -0.2 -1.4 -8.3 38 193 A R H 3> S+ 0 0 111 1,-0.2 4,-1.5 2,-0.2 -1,-0.3 0.838 106.5 66.2 -67.7 -31.0 3.0 0.6 -7.8 39 194 A A H 3> S+ 0 0 0 1,-0.2 4,-1.4 2,-0.2 -2,-0.2 0.834 109.4 35.7 -56.6 -37.0 2.4 -0.0 -4.1 40 195 A V H