==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DE NOVO PROTEIN 19-APR-01 1IHQ . COMPND 2 MOLECULE: CHIMERIC PEPTIDE GLYTM1BZIP: TROPOMYOSIN ALPHA . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS, SACCHAROMYCES . AUTHOR N.J.GREENFIELD,Y.J.YUANG,T.PALM,G.V.SWAPNA,D.MONLEON, . 76 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6396.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 78.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 54 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 46 0, 0.0 46,-0.5 0, 0.0 42,-0.1 0.000 360.0 360.0 360.0 131.5 15.1 -2.9 -14.6 2 2 A A + 0 0 70 44,-0.1 44,-1.9 1,-0.1 45,-0.5 0.250 360.0 116.2 56.9 168.3 15.3 -5.9 -16.9 3 3 A G - 0 0 47 43,-0.1 3,-0.1 42,-0.1 -1,-0.1 -0.828 42.1-154.9 144.3-100.8 13.8 -9.2 -16.0 4 4 A S + 0 0 101 -2,-0.3 2,-0.2 1,-0.2 -1,-0.1 0.943 51.8 107.4 85.8 73.6 10.9 -10.6 -18.1 5 5 A S S S- 0 0 90 0, 0.0 -1,-0.2 0, 0.0 5,-0.1 -0.539 93.6 -18.2 179.1 108.2 9.0 -12.9 -15.9 6 6 A S S >> S+ 0 0 85 -2,-0.2 4,-3.3 1,-0.1 3,-0.8 0.650 79.5 150.8 63.1 14.5 5.5 -12.4 -14.4 7 7 A L H 3> S+ 0 0 39 1,-0.3 4,-2.2 2,-0.2 -1,-0.1 0.790 73.7 51.5 -45.7 -30.1 6.2 -8.8 -15.1 8 8 A E H 3> S+ 0 0 160 2,-0.2 4,-1.8 3,-0.2 -1,-0.3 0.880 110.1 46.0 -75.3 -40.8 2.4 -8.7 -15.4 9 9 A A H <> S+ 0 0 45 -3,-0.8 4,-1.7 2,-0.2 -2,-0.2 0.922 121.1 38.4 -67.0 -45.8 1.9 -10.3 -12.1 10 10 A V H X S+ 0 0 20 -4,-3.3 4,-2.8 2,-0.2 5,-0.2 0.875 114.2 55.5 -71.5 -39.2 4.4 -8.1 -10.4 11 11 A R H X S+ 0 0 128 -4,-2.2 4,-2.1 -5,-0.5 -2,-0.2 0.827 111.9 44.2 -61.8 -32.9 3.2 -5.1 -12.5 12 12 A R H X S+ 0 0 164 -4,-1.8 4,-2.5 2,-0.2 -1,-0.2 0.810 112.9 50.6 -80.3 -33.0 -0.3 -5.7 -11.2 13 13 A K H X S+ 0 0 104 -4,-1.7 4,-2.3 2,-0.2 -2,-0.2 0.830 115.4 43.5 -72.5 -33.6 1.0 -6.2 -7.6 14 14 A I H X S+ 0 0 26 -4,-2.8 4,-2.4 2,-0.2 -2,-0.2 0.923 117.6 43.8 -76.0 -47.8 2.9 -3.0 -7.9 15 15 A R H X S+ 0 0 121 -4,-2.1 4,-2.1 -5,-0.2 -2,-0.2 0.890 119.9 43.8 -63.7 -41.2 0.1 -1.1 -9.5 16 16 A S H X S+ 0 0 44 -4,-2.5 4,-2.6 2,-0.2 5,-0.2 0.970 114.7 46.5 -67.7 -56.2 -2.4 -2.6 -7.2 17 17 A L H X S+ 0 0 23 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.863 111.9 55.1 -53.6 -38.2 -0.3 -2.1 -4.0 18 18 A Q H X S+ 0 0 75 -4,-2.4 4,-2.3 2,-0.2 5,-0.3 0.943 107.8 46.5 -60.4 -50.9 0.3 1.4 -5.2 19 19 A E H X S+ 0 0 71 -4,-2.1 4,-1.7 1,-0.2 -2,-0.2 0.877 114.3 48.7 -58.9 -39.8 -3.3 2.2 -5.5 20 20 A Q H X S+ 0 0 68 -4,-2.6 4,-3.2 2,-0.2 5,-0.3 0.821 107.3 56.5 -69.3 -32.5 -3.9 0.7 -2.1 21 21 A N H X S+ 0 0 7 -4,-2.2 4,-1.9 -5,-0.2 -2,-0.2 0.929 114.3 37.3 -64.0 -47.2 -1.0 2.7 -0.8 22 22 A Y H X S+ 0 0 141 -4,-2.3 4,-2.0 2,-0.2 -1,-0.2 0.736 117.4 53.8 -75.8 -24.3 -2.6 5.9 -1.9 23 23 A H H X S+ 0 0 114 -4,-1.7 4,-1.5 -5,-0.3 -2,-0.2 0.902 117.1 35.0 -75.3 -44.0 -6.0 4.6 -1.0 24 24 A L H X S+ 0 0 29 -4,-3.2 4,-3.0 2,-0.2 5,-0.4 0.770 117.8 55.6 -79.3 -28.3 -5.0 3.7 2.6 25 25 A E H X S+ 0 0 80 -4,-1.9 4,-1.9 -5,-0.3 -2,-0.2 0.926 116.2 34.7 -68.9 -46.9 -2.7 6.8 2.7 26 26 A N H X S+ 0 0 79 -4,-2.0 4,-2.2 2,-0.2 -2,-0.2 0.805 121.9 50.6 -76.4 -31.4 -5.4 9.2 1.8 27 27 A E H X S+ 0 0 106 -4,-1.5 4,-1.6 2,-0.2 -2,-0.2 0.979 115.4 38.5 -69.1 -59.3 -7.9 7.1 3.8 28 28 A V H X S+ 0 0 11 -4,-3.0 4,-3.3 2,-0.2 5,-0.3 0.946 117.2 52.6 -56.1 -52.4 -6.0 6.8 7.0 29 29 A A H X S+ 0 0 49 -4,-1.9 4,-2.0 -5,-0.4 5,-0.2 0.952 112.9 42.1 -46.8 -64.3 -4.8 10.4 6.7 30 30 A R H X S+ 0 0 175 -4,-2.2 4,-1.4 1,-0.2 -1,-0.3 0.748 114.5 57.7 -55.9 -24.1 -8.3 11.7 6.2 31 31 A L H >X S+ 0 0 19 -4,-1.6 4,-4.9 -3,-0.2 3,-0.6 0.983 103.1 47.1 -70.0 -60.9 -9.2 9.3 9.0 32 32 A K H 3X S+ 0 0 84 -4,-3.3 4,-1.7 1,-0.3 -2,-0.2 0.822 118.0 46.3 -49.7 -33.1 -6.8 10.6 11.6 33 33 A K H 3< S+ 0 0 167 -4,-2.0 -1,-0.3 -5,-0.3 -2,-0.2 0.789 117.9 42.5 -79.4 -30.4 -8.1 14.0 10.6 34 34 A L H << S+ 0 0 108 -4,-1.4 -2,-0.2 -3,-0.6 -3,-0.2 0.931 117.0 45.1 -79.5 -51.1 -11.7 12.7 10.7 35 35 A V H < + 0 0 18 -4,-4.9 -3,-0.2 1,-0.1 -2,-0.2 0.967 67.5 156.3 -55.9 -58.2 -11.3 10.7 13.9 36 36 A G < + 0 0 52 -4,-1.7 -1,-0.1 -5,-0.4 -3,-0.1 0.774 29.8 161.5 31.4 39.4 -9.5 13.5 15.7 37 37 A E 0 0 84 -5,-0.1 37,-0.1 39,-0.0 -1,-0.1 0.117 360.0 360.0 -71.2-168.5 -10.8 11.8 18.8 38 38 A R 0 0 258 36,-0.1 36,-0.0 -3,-0.1 38,-0.0 -0.009 360.0 360.0 45.2 360.0 -9.4 12.2 22.3 39 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 40 1 B G 0 0 129 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -69.6 11.5 -2.0 -27.2 41 2 B A + 0 0 118 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.463 360.0 45.8-100.3 58.4 7.8 -2.4 -26.6 42 3 B G + 0 0 51 -2,-0.7 0, 0.0 1,-0.1 0, 0.0 -0.967 59.2 85.0-174.9-179.3 8.2 -4.3 -23.3 43 4 B S - 0 0 79 -2,-0.3 -1,-0.1 1,-0.1 -40,-0.0 0.479 32.3-164.7 79.3 136.2 9.9 -4.5 -19.9 44 5 B S - 0 0 35 -42,-0.1 5,-0.2 0, 0.0 -1,-0.1 -0.111 56.1 -85.8-145.0 37.2 8.8 -2.6 -16.8 45 6 B S > - 0 0 48 3,-0.1 4,-1.7 4,-0.1 -42,-0.1 0.898 38.3-160.7 54.3 104.3 11.8 -2.8 -14.6 46 7 B L H > S+ 0 0 41 -44,-1.9 4,-1.4 2,-0.2 -43,-0.1 0.873 93.1 42.4 -79.5 -40.9 11.7 -6.1 -12.6 47 8 B E H > S+ 0 0 142 -45,-0.5 4,-2.2 -46,-0.5 5,-0.2 0.881 117.8 46.6 -71.9 -40.3 14.1 -4.9 -10.0 48 9 B A H > S+ 0 0 38 2,-0.2 4,-1.4 1,-0.2 -2,-0.2 0.931 119.4 39.5 -66.7 -47.4 12.4 -1.5 -9.8 49 10 B V H X S+ 0 0 16 -4,-1.7 4,-2.6 -5,-0.2 -2,-0.2 0.753 112.4 60.2 -72.5 -25.1 9.0 -3.0 -9.6 50 11 B R H X S+ 0 0 161 -4,-1.4 4,-2.0 2,-0.2 -2,-0.2 0.900 110.2 38.9 -68.2 -42.8 10.4 -5.7 -7.4 51 12 B R H X S+ 0 0 160 -4,-2.2 4,-2.0 2,-0.2 -2,-0.2 0.739 118.1 50.7 -78.1 -24.9 11.5 -3.2 -4.8 52 13 B K H X S+ 0 0 105 -4,-1.4 4,-2.8 2,-0.2 -2,-0.2 0.838 111.7 46.8 -79.5 -36.2 8.3 -1.2 -5.4 53 14 B I H X S+ 0 0 23 -4,-2.6 4,-2.3 2,-0.2 -2,-0.2 0.922 118.0 41.5 -70.4 -46.1 6.1 -4.3 -5.0 54 15 B R H X S+ 0 0 135 -4,-2.0 4,-2.2 2,-0.2 -2,-0.2 0.923 119.9 44.1 -66.5 -46.4 7.9 -5.4 -1.8 55 16 B S H X S+ 0 0 61 -4,-2.0 4,-2.2 2,-0.2 5,-0.2 0.956 115.5 46.7 -62.7 -53.1 8.1 -1.9 -0.4 56 17 B L H X S+ 0 0 24 -4,-2.8 4,-2.8 1,-0.2 -1,-0.2 0.887 109.4 57.1 -55.8 -41.4 4.5 -1.1 -1.3 57 18 B Q H X S+ 0 0 93 -4,-2.3 4,-2.1 1,-0.2 5,-0.2 0.930 106.4 47.8 -55.1 -50.2 3.5 -4.5 0.1 58 19 B E H X S+ 0 0 125 -4,-2.2 4,-1.6 1,-0.2 -1,-0.2 0.889 114.5 46.7 -58.3 -41.9 5.1 -3.5 3.5 59 20 B Q H X S+ 0 0 63 -4,-2.2 4,-3.7 2,-0.2 5,-0.4 0.825 106.6 59.3 -69.3 -32.9 3.3 -0.2 3.3 60 21 B N H X S+ 0 0 3 -4,-2.8 4,-1.7 1,-0.2 -2,-0.2 0.913 113.5 36.7 -61.3 -44.5 0.1 -1.9 2.4 61 22 B Y H X S+ 0 0 148 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.730 117.9 53.1 -79.2 -24.3 0.2 -3.9 5.6 62 23 B H H X S+ 0 0 125 -4,-1.6 4,-1.4 -5,-0.2 -2,-0.2 0.883 116.9 36.4 -76.6 -41.4 1.6 -1.0 7.5 63 24 B L H X S+ 0 0 16 -4,-3.7 4,-2.9 2,-0.2 5,-0.3 0.792 117.0 54.7 -79.7 -30.7 -1.2 1.3 6.3 64 25 B E H X S+ 0 0 81 -4,-1.7 4,-2.0 -5,-0.4 -2,-0.2 0.901 116.3 36.2 -68.3 -42.9 -3.7 -1.5 6.5 65 26 B N H X S+ 0 0 92 -4,-1.8 4,-2.7 2,-0.2 -2,-0.2 0.780 117.7 54.3 -79.3 -29.3 -2.9 -2.2 10.1 66 27 B E H X S+ 0 0 72 -4,-1.4 4,-1.3 2,-0.2 -2,-0.2 0.923 114.7 38.2 -69.3 -46.6 -2.4 1.5 10.8 67 28 B V H X S+ 0 0 16 -4,-2.9 4,-2.5 2,-0.2 5,-0.2 0.918 119.1 48.9 -69.9 -45.4 -5.8 2.4 9.5 68 29 B A H X S+ 0 0 48 -4,-2.0 4,-2.4 -5,-0.3 -2,-0.2 0.962 117.2 40.2 -57.8 -55.7 -7.4 -0.7 11.0 69 30 B R H X S+ 0 0 156 -4,-2.7 4,-2.7 1,-0.2 -1,-0.2 0.767 110.5 63.0 -64.3 -26.3 -5.8 -0.1 14.4 70 31 B L H X S+ 0 0 15 -4,-1.3 4,-2.3 2,-0.2 -1,-0.2 0.941 107.3 40.5 -63.3 -49.5 -6.5 3.6 13.9 71 32 B K H X S+ 0 0 98 -4,-2.5 4,-1.4 2,-0.2 -2,-0.2 0.952 115.7 50.3 -63.5 -51.6 -10.2 3.0 13.9 72 33 B K H < S+ 0 0 189 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.887 113.8 46.6 -53.2 -42.1 -10.0 0.5 16.7 73 34 B L H < S+ 0 0 112 -4,-2.7 -1,-0.3 -5,-0.2 -2,-0.2 0.864 125.0 33.2 -68.2 -37.1 -8.0 3.0 18.6 74 35 B V H < + 0 0 18 -4,-2.3 -2,-0.2 -5,-0.2 -3,-0.2 0.950 64.8 145.2 -80.0 -81.9 -10.5 5.7 17.7 75 36 B G < + 0 0 65 -4,-1.4 -3,-0.1 -5,-0.1 -4,-0.1 0.848 37.2 171.3 41.9 43.7 -13.9 4.1 17.5 76 37 B E 0 0 112 -5,-0.1 -2,-0.0 1,-0.0 -41,-0.0 0.194 360.0 360.0 -66.0-166.9 -15.3 7.3 18.9 77 38 B R 0 0 275 -3,-0.0 -1,-0.0 0, 0.0 0, 0.0 -0.194 360.0 360.0 45.2 360.0 -19.0 8.2 19.1