==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 24-APR-01 1IJ0 . COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.L.AKEY,V.N.MALASHKEVICH,P.S.KIM . 93 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6224.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 81 87.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 81 87.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 135 0, 0.0 4,-2.6 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -36.8 -19.6 8.9 8.2 2 2 A M H > + 0 0 75 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.879 360.0 45.2 -66.1 -37.1 -18.4 9.7 11.6 3 3 A K H > S+ 0 0 126 2,-0.2 4,-3.2 1,-0.2 5,-0.2 0.899 112.1 53.0 -67.5 -44.3 -19.1 6.1 12.7 4 4 A Q H > S+ 0 0 94 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.920 113.1 43.7 -57.6 -47.1 -17.4 4.9 9.6 5 5 A L H X S+ 0 0 2 -4,-2.6 4,-2.3 2,-0.2 5,-0.3 0.945 113.6 48.9 -69.2 -47.0 -14.3 7.0 10.4 6 6 A E H X S+ 0 0 48 -4,-2.9 4,-2.5 1,-0.2 5,-0.2 0.953 112.9 49.4 -58.4 -46.7 -14.2 6.0 14.1 7 7 A D H X S+ 0 0 68 -4,-3.2 4,-2.4 1,-0.2 -1,-0.2 0.899 111.9 47.4 -58.5 -43.3 -14.5 2.3 13.1 8 8 A K H X S+ 0 0 63 -4,-2.1 4,-2.2 -5,-0.2 -1,-0.2 0.899 113.0 46.7 -70.3 -35.3 -11.8 2.4 10.5 9 9 A V H X S+ 0 0 1 -4,-2.3 4,-2.8 2,-0.2 5,-0.2 0.903 111.8 51.8 -73.6 -35.7 -9.3 4.2 12.7 10 10 A E H X S+ 0 0 95 -4,-2.5 4,-2.7 -5,-0.3 -2,-0.2 0.944 110.8 48.6 -59.7 -49.7 -10.1 1.8 15.6 11 11 A E H X S+ 0 0 51 -4,-2.4 4,-2.6 1,-0.2 5,-0.2 0.926 110.9 52.5 -55.7 -44.7 -9.5 -1.1 13.3 12 12 A S H X S+ 0 0 0 -4,-2.2 4,-2.2 1,-0.2 -2,-0.2 0.930 110.9 44.2 -60.3 -49.2 -6.2 0.5 12.2 13 13 A L H X S+ 0 0 32 -4,-2.8 4,-2.6 1,-0.2 -1,-0.2 0.901 112.2 53.4 -65.5 -38.1 -4.9 1.0 15.7 14 14 A S H X S+ 0 0 78 -4,-2.7 4,-1.9 -5,-0.2 -2,-0.2 0.941 113.7 41.6 -61.6 -43.6 -5.9 -2.5 16.7 15 15 A K H X S+ 0 0 55 -4,-2.6 4,-2.2 2,-0.2 -1,-0.2 0.823 113.5 53.4 -72.1 -31.8 -4.0 -4.0 13.7 16 16 A V H X S+ 0 0 1 -4,-2.2 4,-2.0 -5,-0.2 -2,-0.2 0.905 108.7 50.4 -66.7 -43.1 -1.1 -1.7 14.2 17 17 A Y H X S+ 0 0 149 -4,-2.6 4,-1.3 1,-0.2 -2,-0.2 0.922 112.1 47.9 -61.2 -46.5 -0.8 -2.8 17.8 18 18 A H H X S+ 0 0 95 -4,-1.9 4,-1.6 -5,-0.2 -1,-0.2 0.882 110.8 49.1 -64.4 -38.3 -0.9 -6.3 16.7 19 19 A L H X S+ 0 0 7 -4,-2.2 4,-2.8 1,-0.2 -1,-0.2 0.829 105.4 58.6 -72.5 -28.1 1.8 -5.9 14.1 20 20 A E H X S+ 0 0 50 -4,-2.0 4,-2.0 2,-0.2 -1,-0.2 0.861 105.8 50.3 -64.7 -36.5 4.1 -4.1 16.5 21 21 A N H X S+ 0 0 69 -4,-1.3 4,-1.6 2,-0.2 -1,-0.2 0.896 112.0 46.7 -68.8 -38.5 4.0 -7.2 18.7 22 22 A E H X S+ 0 0 30 -4,-1.6 4,-2.3 2,-0.2 -2,-0.2 0.880 113.2 48.7 -69.3 -41.3 4.8 -9.4 15.7 23 23 A V H X S+ 0 0 5 -4,-2.8 4,-2.3 1,-0.2 -2,-0.2 0.855 107.2 55.9 -67.3 -34.9 7.7 -7.1 14.6 24 24 A A H X S+ 0 0 56 -4,-2.0 4,-1.8 -5,-0.2 -1,-0.2 0.928 109.8 46.4 -66.3 -37.9 9.0 -7.0 18.1 25 25 A R H X S+ 0 0 172 -4,-1.6 4,-2.5 2,-0.2 -2,-0.2 0.931 111.2 49.8 -68.5 -46.2 9.3 -10.8 18.1 26 26 A L H X S+ 0 0 7 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.896 108.6 55.5 -57.3 -38.9 10.9 -11.0 14.6 27 27 A K H X S+ 0 0 83 -4,-2.3 4,-0.5 1,-0.2 -1,-0.2 0.929 108.9 45.8 -63.5 -42.2 13.4 -8.4 15.8 28 28 A K H < S+ 0 0 177 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.947 112.7 49.9 -63.5 -47.1 14.4 -10.5 18.7 29 29 A L H < S+ 0 0 110 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.812 117.5 43.1 -60.4 -30.1 14.6 -13.7 16.7 30 30 A V H < 0 0 46 -4,-2.1 -3,-0.1 -5,-0.2 -2,-0.1 0.947 360.0 360.0 -82.7 -95.1 16.8 -12.0 14.1 31 31 A G < 0 0 100 -4,-0.5 -4,-0.1 -5,-0.1 -3,-0.1 0.552 360.0 360.0-126.7 360.0 19.6 -9.6 15.0 32 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 33 1 B R > 0 0 180 0, 0.0 4,-1.5 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -47.4 -11.9 18.3 6.9 34 2 B M H > + 0 0 49 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.922 360.0 51.7 -67.0 -39.6 -13.8 15.1 7.3 35 3 B K H > S+ 0 0 104 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.875 107.7 49.5 -64.7 -38.1 -13.0 14.0 3.8 36 4 B Q H > S+ 0 0 124 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.842 110.0 53.5 -72.9 -25.4 -9.3 14.6 4.2 37 5 B L H X S+ 0 0 2 -4,-1.5 4,-3.0 2,-0.2 -2,-0.2 0.937 107.4 50.0 -67.7 -47.1 -9.5 12.5 7.5 38 6 B E H X S+ 0 0 5 -4,-2.4 4,-3.2 1,-0.2 5,-0.3 0.899 108.3 55.0 -55.4 -42.4 -11.2 9.6 5.6 39 7 B D H X S+ 0 0 81 -4,-1.9 4,-2.3 1,-0.2 -1,-0.2 0.944 111.5 41.7 -57.5 -49.8 -8.5 9.8 3.1 40 8 B K H X S+ 0 0 60 -4,-1.9 4,-2.3 2,-0.2 -2,-0.2 0.873 115.1 52.2 -66.2 -38.0 -5.8 9.4 5.7 41 9 B V H X S+ 0 0 3 -4,-3.0 4,-2.4 2,-0.2 -2,-0.2 0.943 112.4 43.7 -62.5 -50.9 -7.8 6.7 7.5 42 10 B E H X S+ 0 0 97 -4,-3.2 4,-2.1 1,-0.2 -2,-0.2 0.883 114.4 51.3 -65.4 -37.3 -8.2 4.6 4.4 43 11 B E H X S+ 0 0 81 -4,-2.3 4,-1.9 -5,-0.3 -1,-0.2 0.899 110.2 48.2 -65.1 -41.5 -4.6 5.2 3.4 44 12 B S H X S+ 0 0 0 -4,-2.3 4,-2.0 1,-0.2 -2,-0.2 0.930 111.7 50.4 -64.7 -42.8 -3.4 4.0 6.9 45 13 B L H X S+ 0 0 3 -4,-2.4 4,-2.0 1,-0.2 -2,-0.2 0.862 109.2 51.3 -64.6 -37.7 -5.7 1.0 6.7 46 14 B S H X S+ 0 0 73 -4,-2.1 4,-1.6 1,-0.2 -1,-0.2 0.883 111.1 47.2 -66.0 -41.0 -4.3 0.0 3.2 47 15 B K H X S+ 0 0 52 -4,-1.9 4,-2.0 1,-0.2 -1,-0.2 0.835 109.1 55.3 -70.2 -32.1 -0.8 0.3 4.4 48 16 B V H X S+ 0 0 0 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.911 106.7 50.4 -66.7 -41.7 -1.6 -1.8 7.4 49 17 B Y H X S+ 0 0 84 -4,-2.0 4,-1.6 1,-0.2 -1,-0.2 0.859 110.0 50.3 -62.8 -38.3 -3.0 -4.6 5.2 50 18 B H H X S+ 0 0 92 -4,-1.6 4,-2.2 2,-0.2 -1,-0.2 0.896 109.3 51.2 -63.7 -42.3 0.1 -4.6 3.2 51 19 B L H X S+ 0 0 4 -4,-2.0 4,-3.2 2,-0.2 5,-0.2 0.856 104.5 57.4 -64.4 -35.7 2.3 -4.8 6.3 52 20 B E H X S+ 0 0 60 -4,-2.1 4,-2.9 1,-0.2 5,-0.2 0.958 108.3 46.8 -58.9 -47.7 0.3 -7.7 7.5 53 21 B N H X S+ 0 0 96 -4,-1.6 4,-1.9 1,-0.2 -2,-0.2 0.891 113.2 48.4 -58.8 -43.5 1.2 -9.4 4.2 54 22 B E H X S+ 0 0 22 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.899 113.8 47.5 -64.4 -42.7 4.9 -8.4 4.7 55 23 B V H X S+ 0 0 5 -4,-3.2 4,-2.9 2,-0.2 5,-0.2 0.883 108.4 52.7 -68.5 -40.5 4.9 -9.7 8.3 56 24 B A H X S+ 0 0 62 -4,-2.9 4,-1.8 -5,-0.2 -1,-0.2 0.930 112.3 48.1 -60.9 -43.0 3.2 -13.0 7.5 57 25 B R H X S+ 0 0 143 -4,-1.9 4,-2.7 -5,-0.2 -2,-0.2 0.917 112.9 47.0 -63.3 -43.6 6.0 -13.5 4.9 58 26 B L H X S+ 0 0 6 -4,-2.2 4,-3.0 2,-0.2 5,-0.5 0.904 108.7 53.7 -63.9 -44.1 8.7 -12.6 7.3 59 27 B K H X S+ 0 0 89 -4,-2.9 4,-2.1 1,-0.2 -1,-0.2 0.891 113.5 44.4 -58.3 -37.5 7.4 -14.8 10.1 60 28 B K H < S+ 0 0 187 -4,-1.8 -2,-0.2 -5,-0.2 -1,-0.2 0.935 114.8 47.7 -73.1 -43.4 7.5 -17.7 7.6 61 29 B L H < S+ 0 0 112 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.893 121.7 34.5 -62.7 -42.1 10.9 -16.9 6.2 62 30 B V H < 0 0 50 -4,-3.0 -1,-0.2 -5,-0.1 -2,-0.2 0.891 360.0 360.0 -79.3 -40.6 12.5 -16.4 9.6 63 31 B G < 0 0 83 -4,-2.1 -3,-0.2 -5,-0.5 -4,-0.1 0.862 360.0 360.0 75.2 360.0 10.5 -19.1 11.3 64 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 65 1 C R > 0 0 224 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -36.2 -14.5 14.9 18.4 66 2 C M H > + 0 0 34 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.920 360.0 50.6 -61.6 -42.6 -13.0 15.8 15.0 67 3 C K H > S+ 0 0 120 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.857 108.1 51.3 -67.1 -34.2 -9.7 16.7 16.7 68 4 C Q H > S+ 0 0 117 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.927 110.2 50.1 -68.6 -39.5 -9.6 13.4 18.6 69 5 C L H X S+ 0 0 9 -4,-2.4 4,-2.3 1,-0.2 -2,-0.2 0.867 110.0 50.6 -64.4 -33.6 -10.2 11.5 15.4 70 6 C E H X S+ 0 0 31 -4,-2.0 4,-2.3 2,-0.2 -1,-0.2 0.861 109.1 50.7 -71.0 -35.5 -7.4 13.5 13.8 71 7 C D H X S+ 0 0 64 -4,-2.0 4,-2.4 2,-0.2 5,-0.2 0.934 112.0 48.1 -64.1 -47.0 -5.0 12.8 16.6 72 8 C K H X S+ 0 0 72 -4,-2.5 4,-2.7 2,-0.2 -2,-0.2 0.888 111.2 49.5 -59.7 -45.1 -5.9 9.1 16.3 73 9 C V H X S+ 0 0 0 -4,-2.3 4,-2.6 2,-0.2 -1,-0.2 0.930 111.8 48.7 -62.3 -44.6 -5.3 9.0 12.6 74 10 C E H X S+ 0 0 110 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.890 112.4 47.5 -61.2 -42.7 -2.0 10.8 12.9 75 11 C E H X S+ 0 0 94 -4,-2.4 4,-2.2 2,-0.2 5,-0.2 0.903 111.1 53.5 -63.9 -39.9 -0.9 8.3 15.6 76 12 C S H X S+ 0 0 0 -4,-2.7 4,-2.3 -5,-0.2 -2,-0.2 0.946 112.5 42.9 -59.9 -43.9 -2.1 5.6 13.3 77 13 C L H X S+ 0 0 17 -4,-2.6 4,-2.8 2,-0.2 5,-0.3 0.880 110.3 55.8 -69.2 -39.6 0.0 6.9 10.4 78 14 C S H X S+ 0 0 82 -4,-2.6 4,-2.2 2,-0.2 -1,-0.2 0.921 111.5 44.1 -57.8 -45.9 3.1 7.5 12.6 79 15 C K H X S+ 0 0 67 -4,-2.2 4,-2.7 2,-0.2 5,-0.2 0.949 112.0 52.5 -66.7 -47.0 3.0 3.9 13.7 80 16 C V H X S+ 0 0 0 -4,-2.3 4,-2.6 -5,-0.2 -2,-0.2 0.924 110.8 46.7 -52.1 -52.9 2.4 2.6 10.3 81 17 C Y H X S+ 0 0 97 -4,-2.8 4,-2.3 1,-0.2 -1,-0.2 0.914 112.5 51.2 -56.6 -46.3 5.4 4.5 8.8 82 18 C H H X S+ 0 0 94 -4,-2.2 4,-2.1 -5,-0.3 -1,-0.2 0.889 109.8 48.5 -60.6 -41.1 7.5 3.3 11.7 83 19 C L H X S+ 0 0 5 -4,-2.7 4,-2.9 2,-0.2 5,-0.3 0.877 107.3 56.4 -68.5 -35.8 6.5 -0.3 11.1 84 20 C E H X S+ 0 0 59 -4,-2.6 4,-2.7 -5,-0.2 -2,-0.2 0.951 108.8 46.7 -59.4 -45.4 7.3 0.1 7.4 85 21 C N H X S+ 0 0 108 -4,-2.3 4,-2.2 2,-0.2 -2,-0.2 0.911 112.9 49.4 -63.1 -40.4 10.8 1.2 8.3 86 22 C E H X S+ 0 0 42 -4,-2.1 4,-2.3 2,-0.2 -2,-0.2 0.924 113.7 45.7 -64.0 -42.3 11.2 -1.8 10.8 87 23 C V H X S+ 0 0 5 -4,-2.9 4,-2.6 1,-0.2 -2,-0.2 0.912 110.7 53.9 -67.1 -42.5 10.0 -4.3 8.1 88 24 C A H X S+ 0 0 58 -4,-2.7 4,-1.5 -5,-0.3 -1,-0.2 0.896 110.2 46.5 -60.4 -39.2 12.2 -2.7 5.6 89 25 C R H X S+ 0 0 164 -4,-2.2 4,-2.6 2,-0.2 5,-0.3 0.923 111.0 51.9 -70.5 -39.7 15.2 -3.2 7.9 90 26 C L H X S+ 0 0 7 -4,-2.3 4,-3.3 1,-0.2 -2,-0.2 0.911 108.4 51.8 -58.5 -42.9 14.3 -6.7 8.7 91 27 C K H X S+ 0 0 83 -4,-2.6 4,-1.5 2,-0.2 -1,-0.2 0.827 109.5 49.3 -64.4 -33.7 14.0 -7.6 5.0 92 28 C K H < S+ 0 0 151 -4,-1.5 -1,-0.2 -5,-0.2 -2,-0.2 0.933 118.1 38.6 -73.8 -43.1 17.4 -6.2 4.2 93 29 C L H < S+ 0 0 78 -4,-2.6 -2,-0.2 -5,-0.1 -1,-0.2 0.860 114.1 55.1 -77.1 -30.2 19.1 -8.1 7.1 94 30 C V H < 0 0 47 -4,-3.3 -3,-0.2 -5,-0.3 -2,-0.2 0.999 360.0 360.0 -65.0 -68.0 17.0 -11.3 6.6 95 31 C G < 0 0 96 -4,-1.5 -1,-0.1 -5,-0.2 -2,-0.1 -0.560 360.0 360.0 137.6 360.0 18.0 -11.7 2.9