==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 24-APR-01 1IJ1 . COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.L.AKEY,V.N.MALASHKEVICH,P.S.KIM . 93 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6382.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 82 88.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 81 87.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 134 0, 0.0 4,-2.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -50.1 -17.3 -2.5 -3.3 2 2 A M H > + 0 0 46 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.923 360.0 53.3 -60.9 -44.5 -15.0 0.5 -3.4 3 3 A K H > S+ 0 0 113 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.926 109.4 45.7 -60.5 -45.6 -17.1 2.3 -0.8 4 4 A Q H > S+ 0 0 141 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.883 113.2 52.7 -66.7 -31.9 -16.9 -0.6 1.7 5 5 A L H X S+ 0 0 6 -4,-2.1 4,-2.3 2,-0.2 -2,-0.2 0.912 108.0 49.8 -67.3 -41.2 -13.2 -0.8 0.9 6 6 A E H X S+ 0 0 53 -4,-2.9 4,-2.8 1,-0.2 -1,-0.2 0.892 110.5 52.0 -62.4 -37.9 -12.8 3.0 1.6 7 7 A D H X S+ 0 0 84 -4,-2.2 4,-2.4 2,-0.2 -1,-0.2 0.872 109.4 47.7 -64.4 -40.6 -14.6 2.4 4.9 8 8 A K H X S+ 0 0 80 -4,-2.0 4,-2.2 2,-0.2 -1,-0.2 0.870 111.9 50.7 -71.8 -36.7 -12.4 -0.4 6.0 9 9 A V H X S+ 0 0 4 -4,-2.3 4,-2.5 2,-0.2 5,-0.2 0.955 111.9 46.9 -65.8 -46.5 -9.3 1.7 5.1 10 10 A E H X S+ 0 0 90 -4,-2.8 4,-2.0 1,-0.2 -2,-0.2 0.913 112.5 49.4 -61.3 -41.9 -10.6 4.7 7.1 11 11 A E H X S+ 0 0 140 -4,-2.4 4,-1.8 1,-0.2 -1,-0.2 0.896 112.0 50.3 -63.7 -39.0 -11.4 2.4 10.1 12 12 A T H X S+ 0 0 4 -4,-2.2 4,-1.9 1,-0.2 -2,-0.2 0.916 109.8 48.7 -66.0 -39.8 -7.9 0.9 9.8 13 13 A L H X S+ 0 0 7 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.855 107.7 55.6 -70.7 -32.0 -6.2 4.3 9.7 14 14 A S H X S+ 0 0 79 -4,-2.0 4,-1.9 -5,-0.2 -1,-0.2 0.915 108.3 47.7 -63.5 -43.0 -8.2 5.4 12.8 15 15 A K H X S+ 0 0 52 -4,-1.8 4,-2.9 2,-0.2 -2,-0.2 0.863 110.9 53.5 -63.4 -39.1 -6.9 2.3 14.8 16 16 A V H X S+ 0 0 0 -4,-1.9 4,-2.7 2,-0.2 5,-0.2 0.953 107.8 47.8 -61.9 -50.3 -3.4 3.2 13.6 17 17 A Y H X S+ 0 0 104 -4,-2.4 4,-1.8 1,-0.2 -1,-0.2 0.909 112.6 50.5 -59.5 -39.8 -3.5 6.7 14.8 18 18 A H H X S+ 0 0 102 -4,-1.9 4,-2.0 1,-0.2 3,-0.4 0.965 109.4 49.7 -62.4 -50.0 -4.8 5.5 18.1 19 19 A L H X S+ 0 0 7 -4,-2.9 4,-2.9 1,-0.2 -2,-0.2 0.880 106.1 56.8 -56.3 -37.8 -2.1 3.0 18.4 20 20 A E H X S+ 0 0 61 -4,-2.7 4,-2.3 1,-0.2 -1,-0.2 0.905 106.6 50.1 -61.3 -39.6 0.6 5.6 17.6 21 21 A N H X S+ 0 0 109 -4,-1.8 4,-1.9 -3,-0.4 -1,-0.2 0.911 110.2 49.3 -65.9 -38.8 -0.7 7.6 20.5 22 22 A E H X S+ 0 0 24 -4,-2.0 4,-2.3 1,-0.2 -2,-0.2 0.937 110.5 51.3 -64.4 -44.5 -0.6 4.6 22.8 23 23 A V H X S+ 0 0 5 -4,-2.9 4,-2.8 1,-0.2 -2,-0.2 0.914 109.1 50.2 -58.6 -42.5 3.0 3.9 21.7 24 24 A A H X S+ 0 0 39 -4,-2.3 4,-1.6 1,-0.2 -1,-0.2 0.877 111.6 48.8 -64.0 -39.1 4.0 7.6 22.4 25 25 A R H X S+ 0 0 120 -4,-1.9 4,-0.9 2,-0.2 -1,-0.2 0.827 112.1 48.2 -70.4 -33.2 2.5 7.3 25.9 26 26 A L H >X S+ 0 0 1 -4,-2.3 4,-1.9 2,-0.2 3,-1.2 0.953 107.4 55.4 -70.5 -47.5 4.3 4.0 26.6 27 27 A K H 3X S+ 0 0 86 -4,-2.8 4,-1.0 1,-0.3 -2,-0.2 0.870 107.3 50.1 -51.8 -41.3 7.6 5.4 25.4 28 28 A K H 3< S+ 0 0 183 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.763 111.4 49.7 -70.0 -22.8 7.2 8.2 27.9 29 29 A L H << S+ 0 0 104 -3,-1.2 -2,-0.2 -4,-0.9 -1,-0.2 0.704 119.6 35.6 -86.8 -21.8 6.5 5.7 30.6 30 30 A V H < 0 0 52 -4,-1.9 -3,-0.2 -3,-0.2 -2,-0.2 0.913 360.0 360.0 -96.8 -73.1 9.5 3.5 29.8 31 31 A G < 0 0 105 -4,-1.0 -3,-0.2 -5,-0.1 -4,-0.1 0.057 360.0 360.0-156.5 360.0 12.6 5.3 28.6 32 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 33 1 B R > 0 0 145 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -41.0 -6.4 -4.6 -8.6 34 2 B M H > + 0 0 35 2,-0.2 4,-3.5 1,-0.2 5,-0.2 0.948 360.0 40.1 -58.2 -56.7 -9.6 -4.8 -6.5 35 3 B K H > S+ 0 0 135 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.905 117.4 52.2 -61.4 -36.9 -9.0 -8.2 -5.0 36 4 B Q H > S+ 0 0 135 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.874 111.9 46.0 -64.4 -36.7 -5.4 -7.3 -4.6 37 5 B L H X S+ 0 0 3 -4,-2.8 4,-2.4 2,-0.2 -2,-0.2 0.926 113.3 48.4 -69.7 -48.3 -6.4 -4.1 -2.8 38 6 B E H X S+ 0 0 63 -4,-3.5 4,-2.5 1,-0.2 -2,-0.2 0.887 110.6 52.4 -60.5 -39.5 -8.9 -5.9 -0.7 39 7 B D H X S+ 0 0 104 -4,-2.8 4,-2.3 -5,-0.2 -1,-0.2 0.917 110.0 47.5 -63.0 -44.3 -6.2 -8.5 0.1 40 8 B K H X S+ 0 0 65 -4,-1.9 4,-2.8 2,-0.2 -1,-0.2 0.888 112.1 50.3 -63.7 -40.3 -3.7 -5.9 1.2 41 9 B V H X S+ 0 0 4 -4,-2.4 4,-2.9 2,-0.2 -2,-0.2 0.933 111.4 47.5 -65.7 -44.6 -6.4 -4.1 3.3 42 10 B E H X S+ 0 0 78 -4,-2.5 4,-2.0 2,-0.2 -2,-0.2 0.913 113.3 49.0 -59.3 -46.8 -7.4 -7.4 5.1 43 11 B E H X S+ 0 0 96 -4,-2.3 4,-2.1 2,-0.2 -2,-0.2 0.946 112.0 48.2 -56.1 -54.8 -3.7 -8.2 5.7 44 12 B T H X S+ 0 0 3 -4,-2.8 4,-2.7 1,-0.2 -2,-0.2 0.933 109.2 52.9 -54.7 -49.2 -3.0 -4.8 7.1 45 13 B L H X S+ 0 0 22 -4,-2.9 4,-2.6 1,-0.3 -1,-0.2 0.881 108.9 49.8 -57.5 -38.8 -6.1 -4.8 9.4 46 14 B S H X S+ 0 0 70 -4,-2.0 4,-1.8 2,-0.2 -1,-0.3 0.875 108.3 53.2 -68.1 -35.9 -4.9 -8.2 10.8 47 15 B K H X S+ 0 0 55 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.932 110.3 49.4 -61.3 -43.4 -1.4 -6.6 11.3 48 16 B V H X S+ 0 0 0 -4,-2.7 4,-2.0 2,-0.2 -2,-0.2 0.926 107.2 51.8 -63.0 -46.7 -3.2 -3.8 13.2 49 17 B Y H X S+ 0 0 112 -4,-2.6 4,-1.7 1,-0.2 -1,-0.2 0.903 110.0 52.4 -56.8 -38.0 -5.3 -6.2 15.5 50 18 B H H X S+ 0 0 103 -4,-1.8 4,-2.3 1,-0.2 -1,-0.2 0.933 107.5 49.4 -62.8 -48.3 -2.1 -7.9 16.4 51 19 B L H X S+ 0 0 4 -4,-2.2 4,-2.5 1,-0.2 -1,-0.2 0.825 106.4 57.8 -62.2 -31.4 -0.4 -4.7 17.3 52 20 B E H X S+ 0 0 53 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.917 107.3 47.1 -65.7 -40.3 -3.4 -3.8 19.5 53 21 B N H X S+ 0 0 111 -4,-1.7 4,-2.5 2,-0.2 -2,-0.2 0.909 111.3 51.4 -66.0 -40.0 -2.9 -7.0 21.4 54 22 B E H X S+ 0 0 27 -4,-2.3 4,-2.7 1,-0.2 -2,-0.2 0.920 110.6 48.3 -61.4 -42.0 0.8 -6.3 21.8 55 23 B V H X S+ 0 0 5 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.852 110.3 51.9 -67.7 -34.5 0.1 -2.8 23.1 56 24 B A H X S+ 0 0 57 -4,-1.9 4,-1.9 2,-0.2 -1,-0.2 0.898 110.3 49.1 -66.2 -41.1 -2.4 -4.3 25.5 57 25 B R H X S+ 0 0 109 -4,-2.5 4,-2.0 1,-0.2 -2,-0.2 0.930 111.4 49.5 -63.7 -45.5 0.2 -6.8 26.7 58 26 B L H X S+ 0 0 2 -4,-2.7 4,-2.6 2,-0.2 5,-0.3 0.901 107.1 53.6 -62.4 -43.4 2.7 -3.9 27.1 59 27 B K H X S+ 0 0 68 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.939 110.1 48.7 -57.7 -43.0 0.3 -1.8 29.1 60 28 B K H < S+ 0 0 163 -4,-1.9 -1,-0.2 2,-0.2 -2,-0.2 0.869 109.6 52.3 -64.0 -39.2 -0.2 -4.7 31.5 61 29 B L H < S+ 0 0 70 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.965 116.4 37.8 -62.3 -52.7 3.5 -5.3 31.9 62 30 B V H < 0 0 49 -4,-2.6 -2,-0.2 1,-0.2 -1,-0.2 0.767 360.0 360.0 -71.9 -21.6 4.2 -1.7 32.8 63 31 B G < 0 0 96 -4,-2.2 -1,-0.2 -5,-0.3 -2,-0.1 -0.248 360.0 360.0 84.4 360.0 0.9 -1.6 34.8 64 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 65 1 C R > 0 0 228 0, 0.0 4,-1.8 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -29.7 -10.6 7.0 -6.9 66 2 C M H > + 0 0 53 1,-0.2 4,-2.1 2,-0.2 5,-0.1 0.838 360.0 49.0 -65.9 -35.1 -8.9 3.6 -7.1 67 3 C K H > S+ 0 0 118 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.859 110.5 50.7 -73.1 -35.8 -5.4 5.1 -7.3 68 4 C Q H > S+ 0 0 125 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.855 111.2 49.9 -68.8 -36.2 -6.0 7.4 -4.4 69 5 C L H X S+ 0 0 10 -4,-1.8 4,-2.8 2,-0.2 -2,-0.2 0.916 110.0 49.8 -67.6 -45.9 -7.2 4.3 -2.4 70 6 C E H X S+ 0 0 28 -4,-2.1 4,-1.8 2,-0.2 -2,-0.2 0.864 111.7 48.0 -62.3 -37.7 -4.1 2.3 -3.3 71 7 C D H X S+ 0 0 67 -4,-1.9 4,-2.9 2,-0.2 -1,-0.2 0.933 111.3 50.9 -67.8 -45.0 -1.8 5.1 -2.3 72 8 C K H X S+ 0 0 77 -4,-2.1 4,-2.1 1,-0.2 -2,-0.2 0.913 110.3 50.1 -55.9 -47.0 -3.7 5.5 1.0 73 9 C V H X S+ 0 0 3 -4,-2.8 4,-2.1 2,-0.2 -1,-0.2 0.856 110.6 49.7 -63.0 -35.5 -3.4 1.8 1.6 74 10 C E H X S+ 0 0 84 -4,-1.8 4,-2.3 2,-0.2 -2,-0.2 0.956 110.5 49.3 -66.4 -49.4 0.4 2.0 0.9 75 11 C E H X S+ 0 0 115 -4,-2.9 4,-1.7 1,-0.2 -2,-0.2 0.858 110.3 51.6 -57.5 -36.3 0.8 4.9 3.3 76 12 C T H X S+ 0 0 4 -4,-2.1 4,-2.6 1,-0.2 -1,-0.2 0.916 107.3 53.0 -68.2 -42.6 -1.1 3.0 5.9 77 13 C L H X S+ 0 0 42 -4,-2.1 4,-2.8 1,-0.2 -2,-0.2 0.883 107.2 52.0 -57.8 -41.7 1.2 0.0 5.4 78 14 C S H X S+ 0 0 81 -4,-2.3 4,-1.7 2,-0.2 -1,-0.2 0.876 110.4 48.4 -63.3 -37.3 4.2 2.3 6.0 79 15 C K H X S+ 0 0 61 -4,-1.7 4,-2.1 2,-0.2 -2,-0.2 0.905 112.2 49.0 -69.7 -41.4 2.7 3.6 9.2 80 16 C V H X S+ 0 0 2 -4,-2.6 4,-2.4 2,-0.2 -2,-0.2 0.924 108.1 53.4 -62.3 -45.5 2.0 0.0 10.4 81 17 C Y H X S+ 0 0 145 -4,-2.8 4,-1.7 1,-0.2 -1,-0.2 0.916 110.4 48.0 -56.9 -40.6 5.5 -1.1 9.5 82 18 C H H X S+ 0 0 101 -4,-1.7 4,-2.2 1,-0.2 -1,-0.2 0.893 108.6 54.4 -67.6 -38.9 6.8 1.8 11.7 83 19 C L H X S+ 0 0 4 -4,-2.1 4,-2.5 2,-0.2 5,-0.2 0.891 104.9 54.1 -59.6 -39.7 4.4 0.8 14.5 84 20 C E H X S+ 0 0 64 -4,-2.4 4,-2.8 1,-0.2 -1,-0.2 0.929 107.9 49.5 -62.3 -44.2 5.8 -2.8 14.5 85 21 C N H X S+ 0 0 69 -4,-1.7 4,-2.2 1,-0.2 -1,-0.2 0.908 111.8 48.8 -62.2 -39.6 9.3 -1.5 14.9 86 22 C E H X S+ 0 0 35 -4,-2.2 4,-2.3 2,-0.2 -2,-0.2 0.914 113.4 46.1 -65.0 -43.7 8.2 0.8 17.8 87 23 C V H X S+ 0 0 5 -4,-2.5 4,-2.9 2,-0.2 5,-0.2 0.907 110.5 53.9 -66.6 -40.1 6.4 -2.1 19.5 88 24 C A H X S+ 0 0 55 -4,-2.8 4,-1.4 -5,-0.2 -2,-0.2 0.908 109.4 47.5 -62.1 -41.4 9.3 -4.4 18.9 89 25 C R H X S+ 0 0 178 -4,-2.2 4,-2.3 2,-0.2 -1,-0.2 0.907 112.3 51.1 -67.2 -38.2 11.7 -1.9 20.6 90 26 C L H X S+ 0 0 4 -4,-2.3 4,-2.9 1,-0.2 5,-0.5 0.935 106.4 52.5 -63.8 -44.9 9.2 -1.6 23.5 91 27 C K H X S+ 0 0 75 -4,-2.9 4,-1.7 1,-0.2 -1,-0.2 0.847 110.7 49.5 -60.1 -31.1 8.9 -5.3 24.0 92 28 C K H < S+ 0 0 176 -4,-1.4 -1,-0.2 -5,-0.2 -2,-0.2 0.909 112.5 48.1 -72.6 -42.1 12.7 -5.4 24.2 93 29 C L H < S+ 0 0 92 -4,-2.3 -2,-0.2 1,-0.2 -3,-0.2 0.905 123.0 29.6 -65.5 -45.7 12.8 -2.5 26.8 94 30 C V H < 0 0 46 -4,-2.9 -3,-0.2 1,-0.2 -2,-0.2 0.764 360.0 360.0 -87.9 -27.4 10.1 -3.9 29.1 95 31 C G < 0 0 58 -4,-1.7 -1,-0.2 -5,-0.5 -2,-0.1 -0.290 360.0 360.0 82.7 360.0 10.7 -7.6 28.5