==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 24-APR-01 1IJ2 . COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.L.AKEY,V.N.MALASHKEVICH,P.S.KIM . 93 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6236.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 81 87.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 80 86.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 134 0, 0.0 4,-2.2 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -21.4 6.2 28.0 14.8 2 2 A M H > + 0 0 46 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.949 360.0 42.0 -70.9 -43.3 5.3 27.8 18.5 3 3 A K H > S+ 0 0 163 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.910 112.4 55.5 -66.2 -41.6 2.0 26.0 17.8 4 4 A Q H > S+ 0 0 88 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.938 111.1 45.7 -52.5 -52.0 3.7 23.9 15.2 5 5 A L H X S+ 0 0 3 -4,-2.2 4,-2.5 1,-0.2 -2,-0.2 0.913 110.7 50.6 -59.9 -49.6 6.2 22.7 17.8 6 6 A E H X S+ 0 0 60 -4,-2.4 4,-2.0 1,-0.2 -1,-0.2 0.875 110.4 51.0 -61.6 -34.6 3.7 22.1 20.5 7 7 A D H X S+ 0 0 66 -4,-2.6 4,-2.3 2,-0.2 -1,-0.2 0.865 109.0 49.9 -74.0 -31.7 1.6 19.9 18.1 8 8 A K H X S+ 0 0 55 -4,-1.8 4,-2.8 -5,-0.2 -2,-0.2 0.917 111.0 50.0 -69.3 -38.1 4.6 17.9 17.1 9 9 A V H X S+ 0 0 9 -4,-2.5 4,-1.8 1,-0.2 -2,-0.2 0.875 109.8 51.8 -65.1 -37.6 5.5 17.3 20.8 10 10 A E H X S+ 0 0 119 -4,-2.0 4,-1.7 -5,-0.2 -1,-0.2 0.943 110.6 47.2 -61.6 -45.1 1.9 16.3 21.3 11 11 A E H X S+ 0 0 92 -4,-2.3 4,-2.7 1,-0.2 -2,-0.2 0.928 111.2 51.5 -64.2 -42.9 2.1 13.8 18.5 12 12 A L H X S+ 0 0 0 -4,-2.8 4,-2.3 1,-0.2 -1,-0.2 0.815 106.9 54.6 -61.3 -36.4 5.5 12.4 19.8 13 13 A L H X S+ 0 0 59 -4,-1.8 4,-1.6 2,-0.2 -1,-0.2 0.879 111.4 42.3 -65.8 -39.9 3.9 12.0 23.1 14 14 A S H X S+ 0 0 79 -4,-1.7 4,-2.5 -3,-0.2 -2,-0.2 0.909 114.5 53.4 -73.2 -36.9 1.0 9.8 21.8 15 15 A K H X S+ 0 0 63 -4,-2.7 4,-2.7 1,-0.2 -2,-0.2 0.879 109.8 46.1 -63.1 -45.9 3.5 8.0 19.5 16 16 A T H X S+ 0 0 0 -4,-2.3 4,-2.5 2,-0.2 -1,-0.2 0.878 112.4 50.1 -69.3 -33.2 5.8 7.0 22.3 17 17 A Y H X S+ 0 0 142 -4,-1.6 4,-2.4 2,-0.2 -2,-0.2 0.943 112.2 49.2 -67.4 -40.4 2.9 5.9 24.5 18 18 A H H X S+ 0 0 76 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.940 112.6 46.9 -61.9 -46.7 1.7 3.8 21.5 19 19 A L H X S+ 0 0 2 -4,-2.7 4,-3.0 1,-0.2 5,-0.3 0.911 109.0 55.2 -65.9 -34.7 5.2 2.3 21.0 20 20 A E H X S+ 0 0 58 -4,-2.5 4,-2.7 1,-0.2 -1,-0.2 0.932 109.3 46.8 -62.5 -44.0 5.4 1.6 24.7 21 21 A N H X S+ 0 0 75 -4,-2.4 4,-2.3 2,-0.2 -1,-0.2 0.905 112.4 50.1 -63.2 -43.4 2.2 -0.3 24.6 22 22 A E H X S+ 0 0 40 -4,-2.5 4,-1.8 2,-0.2 -2,-0.2 0.900 113.8 44.7 -62.0 -41.4 3.3 -2.3 21.5 23 23 A V H X S+ 0 0 5 -4,-3.0 4,-2.5 2,-0.2 -2,-0.2 0.928 110.7 53.3 -70.6 -46.1 6.6 -3.2 23.1 24 24 A A H X S+ 0 0 35 -4,-2.7 4,-1.4 -5,-0.3 -2,-0.2 0.920 111.7 47.2 -53.4 -43.6 5.0 -4.2 26.5 25 25 A R H X S+ 0 0 107 -4,-2.3 4,-2.1 1,-0.2 -1,-0.2 0.880 109.6 52.4 -65.9 -41.3 2.7 -6.5 24.6 26 26 A L H X S+ 0 0 2 -4,-1.8 4,-1.5 1,-0.2 -1,-0.2 0.904 107.4 52.6 -60.4 -42.2 5.5 -8.0 22.6 27 27 A K H < S+ 0 0 91 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.836 107.2 52.8 -62.1 -32.9 7.4 -8.7 25.8 28 28 A K H < S+ 0 0 164 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.920 111.5 45.7 -67.3 -46.2 4.3 -10.5 27.2 29 29 A L H < 0 0 59 -4,-2.1 -2,-0.2 -5,-0.1 -1,-0.2 0.710 360.0 360.0 -67.4 -26.3 4.2 -12.7 24.0 30 30 A V < 0 0 86 -4,-1.5 -3,-0.2 -5,-0.2 -4,-0.1 -0.326 360.0 360.0 167.3 360.0 7.9 -13.4 24.1 31 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 32 1 B R > 0 0 149 0, 0.0 4,-1.9 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -20.8 16.2 28.2 20.9 33 2 B M H > + 0 0 70 2,-0.2 4,-2.3 1,-0.2 5,-0.1 0.902 360.0 45.7 -71.5 -42.2 13.2 27.6 18.7 34 3 B K H > S+ 0 0 148 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.887 110.8 54.8 -69.3 -36.2 15.2 26.2 15.7 35 4 B Q H > S+ 0 0 136 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.923 110.6 45.1 -62.0 -41.5 17.1 24.0 18.1 36 5 B L H X S+ 0 0 14 -4,-1.9 4,-2.8 1,-0.2 5,-0.3 0.906 110.3 54.0 -67.8 -40.7 13.9 22.5 19.5 37 6 B E H X S+ 0 0 20 -4,-2.3 4,-2.5 1,-0.2 -1,-0.2 0.921 109.5 49.5 -56.8 -43.0 12.5 22.1 16.0 38 7 B D H X S+ 0 0 109 -4,-2.5 4,-2.4 1,-0.2 -2,-0.2 0.925 112.5 46.4 -62.6 -44.7 15.7 20.1 15.2 39 8 B K H X S+ 0 0 75 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.892 111.6 50.8 -68.2 -38.1 15.4 17.9 18.2 40 9 B V H X S+ 0 0 0 -4,-2.8 4,-2.2 1,-0.2 -1,-0.2 0.939 110.1 50.9 -66.2 -41.3 11.7 17.2 17.6 41 10 B E H X S+ 0 0 81 -4,-2.5 4,-2.3 -5,-0.3 -2,-0.2 0.924 111.0 48.1 -63.0 -40.3 12.4 16.3 14.0 42 11 B E H X S+ 0 0 78 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.938 111.1 49.1 -69.5 -37.6 15.1 13.9 15.1 43 12 B L H X S+ 0 0 0 -4,-2.6 4,-2.5 1,-0.2 -1,-0.2 0.852 109.7 53.6 -67.3 -30.2 12.9 12.2 17.8 44 13 B L H X S+ 0 0 8 -4,-2.2 4,-2.3 2,-0.2 -1,-0.2 0.913 109.1 48.7 -66.7 -44.2 10.1 11.9 15.2 45 14 B S H X S+ 0 0 74 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.889 111.7 49.4 -61.2 -41.4 12.5 10.1 12.8 46 15 B K H X S+ 0 0 86 -4,-2.4 4,-2.8 2,-0.2 -2,-0.2 0.925 111.5 48.6 -64.6 -43.4 13.6 7.8 15.6 47 16 B T H X S+ 0 0 0 -4,-2.5 4,-2.1 2,-0.2 -2,-0.2 0.886 109.6 51.5 -65.1 -37.7 10.0 7.0 16.6 48 17 B Y H X S+ 0 0 96 -4,-2.3 4,-1.9 2,-0.2 -1,-0.2 0.924 111.6 49.0 -63.2 -43.9 9.1 6.3 12.9 49 18 B H H X S+ 0 0 116 -4,-2.2 4,-2.0 1,-0.2 -2,-0.2 0.948 111.9 47.4 -62.3 -46.8 12.1 3.9 12.8 50 19 B L H X S+ 0 0 13 -4,-2.8 4,-2.5 1,-0.2 -1,-0.2 0.839 107.2 57.1 -63.7 -34.5 11.1 2.1 16.1 51 20 B E H X S+ 0 0 69 -4,-2.1 4,-2.7 2,-0.2 -1,-0.2 0.952 108.7 47.3 -60.8 -45.8 7.5 1.8 14.9 52 21 B N H X S+ 0 0 112 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.901 111.0 50.9 -63.0 -38.4 8.8 -0.1 11.8 53 22 B E H X S+ 0 0 24 -4,-2.0 4,-2.3 1,-0.2 -1,-0.2 0.920 111.9 46.6 -66.2 -41.9 11.0 -2.3 13.9 54 23 B V H X S+ 0 0 4 -4,-2.5 4,-3.0 2,-0.2 5,-0.2 0.903 110.1 53.9 -66.8 -38.9 8.2 -3.2 16.2 55 24 B A H X S+ 0 0 45 -4,-2.7 4,-1.9 1,-0.2 -2,-0.2 0.965 110.0 47.5 -59.9 -49.8 5.9 -3.9 13.2 56 25 B R H X S+ 0 0 126 -4,-2.4 4,-1.5 1,-0.2 -1,-0.2 0.901 113.3 48.8 -56.3 -44.0 8.5 -6.3 11.8 57 26 B L H >X S+ 0 0 6 -4,-2.3 4,-2.4 1,-0.2 3,-0.5 0.955 108.3 51.6 -64.2 -49.9 8.8 -8.0 15.2 58 27 B K H 3X S+ 0 0 83 -4,-3.0 4,-1.8 1,-0.3 -1,-0.2 0.828 108.2 53.9 -54.7 -35.8 5.0 -8.4 15.8 59 28 B K H 3< S+ 0 0 154 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.863 111.5 45.0 -64.8 -40.4 4.8 -10.1 12.4 60 29 B L H << S+ 0 0 90 -4,-1.5 -2,-0.2 -3,-0.5 -1,-0.2 0.841 121.0 38.1 -73.8 -37.2 7.5 -12.5 13.4 61 30 B V H < S- 0 0 48 -4,-2.4 -2,-0.2 -5,-0.1 -3,-0.2 0.981 98.9-152.4 -77.6 -70.3 6.1 -13.3 16.8 62 31 B G < 0 0 31 -4,-1.8 -3,-0.1 -5,-0.1 -2,-0.1 -0.258 360.0 360.0 112.8 161.2 2.3 -13.3 16.1 63 32 B E 0 0 200 -2,-0.1 -4,-0.1 -4,-0.1 -5,-0.0 0.409 360.0 360.0 4.6 360.0 -1.0 -12.7 17.9 64 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 65 1 C R > 0 0 159 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -46.0 6.3 28.0 27.3 66 2 C M H > + 0 0 27 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.874 360.0 51.8 -66.1 -35.4 9.6 27.4 25.5 67 3 C K H > S+ 0 0 103 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.860 107.6 52.3 -68.7 -35.8 11.0 25.9 28.7 68 4 C Q H > S+ 0 0 123 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.932 109.7 47.9 -66.3 -42.5 8.0 23.6 29.1 69 5 C L H X S+ 0 0 9 -4,-2.2 4,-2.4 1,-0.2 -1,-0.2 0.887 111.2 51.8 -63.1 -40.0 8.5 22.3 25.5 70 6 C E H X S+ 0 0 44 -4,-1.9 4,-2.2 1,-0.2 -1,-0.2 0.927 108.4 51.3 -64.2 -42.5 12.2 21.8 26.2 71 7 C D H X S+ 0 0 51 -4,-2.4 4,-1.8 1,-0.2 -2,-0.2 0.922 111.3 47.3 -58.9 -45.0 11.3 19.9 29.3 72 8 C K H X S+ 0 0 52 -4,-2.3 4,-2.5 1,-0.2 -1,-0.2 0.866 109.5 52.5 -65.6 -39.6 9.0 17.6 27.4 73 9 C V H X S+ 0 0 8 -4,-2.4 4,-2.2 2,-0.2 -1,-0.2 0.887 107.8 52.8 -65.5 -34.8 11.5 17.0 24.7 74 10 C E H X S+ 0 0 112 -4,-2.2 4,-1.5 1,-0.2 -2,-0.2 0.929 111.0 47.6 -65.5 -36.9 14.0 16.0 27.3 75 11 C E H X S+ 0 0 92 -4,-1.8 4,-2.2 1,-0.2 -2,-0.2 0.881 111.9 48.5 -69.4 -42.8 11.5 13.6 28.7 76 12 C L H X S+ 0 0 0 -4,-2.5 4,-2.8 1,-0.2 -1,-0.2 0.839 105.6 59.1 -69.0 -32.5 10.8 12.2 25.3 77 13 C L H X S+ 0 0 58 -4,-2.2 4,-1.9 2,-0.2 -1,-0.2 0.900 109.2 44.2 -62.4 -39.9 14.5 11.8 24.5 78 14 C S H X S+ 0 0 76 -4,-1.5 4,-2.1 2,-0.2 -2,-0.2 0.930 113.1 50.8 -72.1 -41.6 14.9 9.5 27.5 79 15 C K H X S+ 0 0 38 -4,-2.2 4,-2.7 1,-0.2 -2,-0.2 0.894 110.7 49.1 -62.3 -43.4 11.7 7.6 26.7 80 16 C T H X S+ 0 0 3 -4,-2.8 4,-2.4 2,-0.2 -1,-0.2 0.917 110.2 49.7 -65.1 -41.1 12.8 7.0 23.1 81 17 C Y H X S+ 0 0 139 -4,-1.9 4,-2.1 -5,-0.2 -1,-0.2 0.906 110.7 52.1 -64.3 -37.0 16.3 5.8 24.1 82 18 C H H X S+ 0 0 93 -4,-2.1 4,-2.2 2,-0.2 -2,-0.2 0.945 111.0 46.8 -61.8 -48.1 14.6 3.4 26.6 83 19 C L H X S+ 0 0 5 -4,-2.7 4,-2.9 1,-0.2 5,-0.2 0.867 108.3 55.2 -62.0 -36.9 12.4 2.1 23.8 84 20 C E H X S+ 0 0 98 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.921 108.6 48.7 -62.0 -44.3 15.3 1.7 21.5 85 21 C N H X S+ 0 0 61 -4,-2.1 4,-2.0 2,-0.2 -2,-0.2 0.899 113.1 47.4 -61.3 -42.2 17.0 -0.4 24.2 86 22 C E H X S+ 0 0 17 -4,-2.2 4,-2.3 2,-0.2 -2,-0.2 0.918 112.6 48.4 -66.4 -42.1 13.9 -2.6 24.6 87 23 C V H X S+ 0 0 4 -4,-2.9 4,-2.7 1,-0.2 -2,-0.2 0.932 110.1 51.8 -65.7 -40.7 13.5 -3.1 20.9 88 24 C A H X S+ 0 0 34 -4,-2.4 4,-1.8 -5,-0.2 -1,-0.2 0.898 109.2 50.5 -61.6 -40.8 17.1 -4.0 20.4 89 25 C R H X S+ 0 0 120 -4,-2.0 4,-1.5 1,-0.2 -1,-0.2 0.943 111.7 47.6 -63.0 -46.0 16.8 -6.6 23.2 90 26 C L H X S+ 0 0 11 -4,-2.3 4,-2.5 1,-0.2 5,-0.4 0.892 107.5 56.7 -61.4 -40.1 13.6 -8.1 21.5 91 27 C K H X S+ 0 0 55 -4,-2.7 4,-2.5 1,-0.2 -1,-0.2 0.915 110.0 45.2 -60.0 -39.4 15.4 -8.2 18.1 92 28 C K H < S+ 0 0 139 -4,-1.8 -1,-0.2 2,-0.2 -2,-0.2 0.725 113.5 48.4 -76.5 -23.0 18.1 -10.3 19.6 93 29 C L H < S+ 0 0 123 -4,-1.5 -2,-0.2 -3,-0.2 -1,-0.2 0.822 123.7 31.6 -84.6 -30.9 15.8 -12.6 21.5 94 30 C V H < 0 0 49 -4,-2.5 -2,-0.2 -5,-0.2 -3,-0.2 0.909 360.0 360.0 -88.0 -52.5 13.6 -13.2 18.4 95 31 C G < 0 0 90 -4,-2.5 -3,-0.1 -5,-0.4 -4,-0.1 0.831 360.0 360.0 67.3 360.0 16.1 -12.9 15.5