==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 24-APR-01 1IJ3 . COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.L.AKEY,V.N.MALASHKEVICH,P.S.KIM . 94 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6530.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 80 85.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 76 80.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 214 0, 0.0 4,-1.0 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 150.5 -16.0 12.0 11.2 2 2 A M H > + 0 0 29 1,-0.2 4,-2.4 2,-0.2 3,-0.3 0.860 360.0 63.5 -67.5 -37.5 -13.3 9.8 12.6 3 3 A K H > S+ 0 0 127 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.880 96.8 58.1 -53.3 -43.1 -15.4 6.8 11.5 4 4 A Q H > S+ 0 0 76 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.912 110.1 42.2 -53.9 -49.1 -14.9 7.9 7.9 5 5 A L H X S+ 0 0 5 -4,-1.0 4,-2.4 -3,-0.3 -1,-0.2 0.855 109.3 57.8 -70.1 -36.0 -11.1 7.7 8.3 6 6 A E H X S+ 0 0 26 -4,-2.4 4,-2.2 1,-0.2 -2,-0.2 0.917 107.0 48.8 -62.9 -39.6 -11.3 4.5 10.2 7 7 A D H X S+ 0 0 92 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.896 111.1 49.6 -66.4 -40.4 -13.1 2.8 7.3 8 8 A K H X S+ 0 0 88 -4,-1.6 4,-2.2 2,-0.2 -1,-0.2 0.886 111.9 48.5 -65.5 -39.9 -10.6 4.1 4.8 9 9 A V H X S+ 0 0 2 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.894 108.5 53.3 -68.8 -37.0 -7.7 2.9 6.9 10 10 A E H X S+ 0 0 104 -4,-2.2 4,-2.0 1,-0.2 -2,-0.2 0.935 111.0 47.5 -62.0 -43.5 -9.3 -0.6 7.3 11 11 A E H X S+ 0 0 108 -4,-2.2 4,-2.7 1,-0.2 -2,-0.2 0.922 110.1 52.7 -62.0 -42.7 -9.6 -0.7 3.5 12 12 A L H X S+ 0 0 8 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.843 107.5 51.4 -63.6 -34.6 -5.9 0.4 3.1 13 13 A L H X S+ 0 0 52 -4,-2.1 4,-2.1 2,-0.2 -1,-0.2 0.910 112.0 46.5 -70.1 -39.3 -4.7 -2.4 5.5 14 14 A S H X S+ 0 0 75 -4,-2.0 4,-2.4 1,-0.2 -2,-0.2 0.933 112.2 50.0 -67.6 -41.6 -6.6 -5.0 3.5 15 15 A K H X S+ 0 0 18 -4,-2.7 4,-2.4 1,-0.2 -1,-0.2 0.895 111.0 50.4 -60.8 -39.0 -5.3 -3.6 0.2 16 16 A S H X S+ 0 0 11 -4,-2.0 4,-2.4 2,-0.2 -1,-0.2 0.898 108.6 50.8 -66.7 -43.3 -1.7 -3.7 1.6 17 17 A Y H X S+ 0 0 157 -4,-2.1 4,-1.7 1,-0.2 -1,-0.2 0.930 112.9 46.6 -59.2 -49.9 -2.1 -7.3 2.7 18 18 A H H X S+ 0 0 93 -4,-2.4 4,-2.0 1,-0.2 -2,-0.2 0.887 111.5 50.9 -59.6 -43.0 -3.3 -8.3 -0.8 19 19 A L H X S+ 0 0 8 -4,-2.4 4,-2.7 1,-0.2 -1,-0.2 0.896 106.5 55.2 -63.2 -41.1 -0.5 -6.4 -2.6 20 20 A E H X S+ 0 0 60 -4,-2.4 4,-1.7 1,-0.2 -1,-0.2 0.902 109.2 46.9 -58.6 -43.8 2.1 -8.0 -0.4 21 21 A N H X S+ 0 0 62 -4,-1.7 4,-2.1 2,-0.2 -1,-0.2 0.858 111.2 51.7 -67.5 -35.8 0.9 -11.4 -1.4 22 22 A E H X S+ 0 0 32 -4,-2.0 4,-2.4 2,-0.2 -2,-0.2 0.915 108.7 50.6 -65.9 -41.6 0.8 -10.4 -5.1 23 23 A V H X S+ 0 0 4 -4,-2.7 4,-2.0 1,-0.2 -2,-0.2 0.870 111.0 50.0 -64.0 -36.5 4.3 -9.2 -4.9 24 24 A A H < S+ 0 0 35 -4,-1.7 4,-0.5 2,-0.2 -1,-0.2 0.860 110.1 49.1 -68.6 -40.8 5.3 -12.5 -3.3 25 25 A R H X S+ 0 0 155 -4,-2.1 4,-3.0 1,-0.2 3,-0.4 0.890 113.0 48.8 -66.7 -39.7 3.6 -14.5 -6.1 26 26 A L H <>S+ 0 0 13 -4,-2.4 5,-3.1 1,-0.2 6,-0.3 0.875 110.2 48.2 -69.4 -39.4 5.3 -12.4 -8.7 27 27 A K T <5S+ 0 0 104 -4,-2.0 3,-0.3 4,-0.3 -1,-0.2 0.548 117.7 45.2 -78.1 -5.7 8.8 -12.7 -7.2 28 28 A K T 45S+ 0 0 155 -4,-0.5 2,-1.7 -3,-0.4 -2,-0.2 0.848 105.3 56.6 -96.2 -52.1 8.2 -16.5 -7.0 29 29 A L T <5S- 0 0 100 -4,-3.0 -1,-0.2 1,-0.1 -2,-0.1 -0.241 135.2 -84.8 -78.6 44.7 6.7 -17.1 -10.4 30 30 A V T 5S+ 0 0 113 -2,-1.7 -3,-0.2 -3,-0.3 -1,-0.1 0.457 93.1 131.8 66.7 10.2 9.9 -15.5 -11.8 31 31 A G < 0 0 3 -5,-3.1 -4,-0.3 -6,-0.3 64,-0.2 0.509 360.0 360.0 -67.2 0.1 8.7 -11.9 -11.5 32 32 A E 0 0 116 -6,-0.3 62,-0.3 -5,-0.2 63,-0.1 0.593 360.0 360.0 2.8 360.0 12.2 -11.4 -9.9 33 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 34 1 B R > 0 0 160 0, 0.0 4,-2.0 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -35.6 -4.1 16.4 13.7 35 2 B M H > + 0 0 58 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.965 360.0 46.6 -69.5 -49.5 -7.3 15.5 12.0 36 3 B K H > S+ 0 0 139 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.885 111.5 54.9 -56.7 -40.2 -6.5 17.4 8.8 37 4 B Q H > S+ 0 0 97 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.902 107.3 48.6 -60.3 -42.2 -3.1 15.8 9.0 38 5 B L H X S+ 0 0 4 -4,-2.0 4,-2.7 1,-0.2 5,-0.2 0.915 109.4 52.2 -64.9 -43.4 -4.6 12.3 9.1 39 6 B E H X S+ 0 0 76 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.904 109.8 50.0 -58.3 -42.2 -6.8 13.0 6.2 40 7 B D H X S+ 0 0 67 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.883 112.1 47.0 -64.2 -41.5 -3.8 14.2 4.2 41 8 B K H X S+ 0 0 77 -4,-2.1 4,-2.6 2,-0.2 -2,-0.2 0.898 111.1 50.5 -69.2 -40.0 -1.8 11.1 5.0 42 9 B V H X S+ 0 0 2 -4,-2.7 4,-2.4 1,-0.2 -2,-0.2 0.883 109.8 51.8 -66.0 -35.6 -4.7 8.7 4.2 43 10 B E H X S+ 0 0 107 -4,-2.0 4,-1.8 -5,-0.2 -1,-0.2 0.909 110.6 47.5 -67.2 -38.1 -5.1 10.5 0.8 44 11 B E H X S+ 0 0 90 -4,-1.8 4,-2.4 2,-0.2 -2,-0.2 0.909 112.1 51.1 -66.8 -41.0 -1.4 10.1 0.1 45 12 B L H X S+ 0 0 6 -4,-2.6 4,-2.3 1,-0.2 -2,-0.2 0.885 107.8 51.1 -65.4 -40.2 -1.7 6.4 1.1 46 13 B L H X S+ 0 0 34 -4,-2.4 4,-2.0 2,-0.2 -1,-0.2 0.907 111.6 48.2 -64.1 -38.6 -4.7 5.8 -1.2 47 14 B S H X S+ 0 0 59 -4,-1.8 4,-2.0 1,-0.2 -2,-0.2 0.919 112.3 48.7 -68.2 -41.9 -2.8 7.3 -4.1 48 15 B K H X S+ 0 0 53 -4,-2.4 4,-2.3 1,-0.2 -1,-0.2 0.859 109.4 53.1 -63.1 -38.7 0.3 5.2 -3.4 49 16 B S H X S+ 0 0 8 -4,-2.3 4,-2.6 2,-0.2 -1,-0.2 0.909 108.1 49.8 -65.3 -42.3 -1.9 2.1 -3.2 50 17 B Y H X S+ 0 0 126 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.925 110.9 50.3 -60.8 -44.8 -3.4 2.8 -6.6 51 18 B H H X S+ 0 0 88 -4,-2.0 4,-2.5 2,-0.2 -2,-0.2 0.913 112.4 46.4 -56.5 -51.7 0.1 3.3 -8.1 52 19 B L H X S+ 0 0 4 -4,-2.3 4,-2.5 2,-0.2 5,-0.2 0.915 111.1 51.2 -62.5 -43.0 1.4 0.1 -6.7 53 20 B E H X S+ 0 0 62 -4,-2.6 4,-1.7 1,-0.2 -1,-0.2 0.914 112.0 47.8 -62.7 -39.0 -1.6 -1.9 -7.8 54 21 B N H X S+ 0 0 111 -4,-2.3 4,-1.7 2,-0.2 -1,-0.2 0.898 110.7 50.4 -68.6 -40.0 -1.3 -0.6 -11.3 55 22 B E H X S+ 0 0 47 -4,-2.5 4,-2.4 1,-0.2 -1,-0.2 0.893 109.9 51.0 -65.0 -39.0 2.5 -1.3 -11.4 56 23 B V H X S+ 0 0 2 -4,-2.5 4,-0.9 1,-0.2 -1,-0.2 0.862 108.3 52.2 -67.2 -32.8 1.8 -4.9 -10.2 57 24 B A H < S+ 0 0 51 -4,-1.7 4,-0.3 -5,-0.2 -1,-0.2 0.825 108.9 50.3 -71.7 -30.0 -0.8 -5.3 -13.0 58 25 B R H >X S+ 0 0 103 -4,-1.7 4,-2.1 1,-0.2 3,-2.0 0.933 106.8 55.3 -70.2 -46.2 1.7 -4.1 -15.5 59 26 B L H 3X S+ 0 0 3 -4,-2.4 4,-0.9 1,-0.3 -1,-0.2 0.714 98.4 61.1 -58.4 -24.9 4.2 -6.6 -14.2 60 27 B K H 3< S+ 0 0 102 -4,-0.9 -1,-0.3 2,-0.2 -2,-0.2 0.647 108.3 46.2 -76.8 -12.6 1.7 -9.5 -14.7 61 28 B K H X4 S+ 0 0 155 -3,-2.0 3,-1.8 -4,-0.3 -2,-0.2 0.914 114.1 44.8 -88.8 -56.3 1.9 -8.5 -18.4 62 29 B L H 3< S+ 0 0 97 -4,-2.1 -2,-0.2 1,-0.3 -3,-0.2 0.501 111.2 53.1 -67.1 -7.0 5.7 -8.2 -18.6 63 30 B V T 3< 0 0 55 -4,-0.9 -1,-0.3 -5,-0.2 -3,-0.1 0.429 360.0 360.0-103.0 -5.0 6.3 -11.5 -16.7 64 31 B G < 0 0 95 -3,-1.8 -3,-0.1 -5,-0.1 -4,-0.0 -0.600 360.0 360.0-149.5 360.0 4.0 -13.2 -19.2 65 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 66 1 C R > 0 0 165 0, 0.0 4,-1.7 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -39.7 -8.6 6.8 19.5 67 2 C M H > + 0 0 63 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.895 360.0 52.8 -69.1 -39.8 -7.1 9.4 17.3 68 3 C K H > S+ 0 0 118 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.888 104.8 57.1 -59.1 -40.7 -3.7 8.1 18.5 69 4 C Q H > S+ 0 0 106 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.925 109.8 42.4 -56.4 -49.9 -5.0 4.7 17.4 70 5 C L H X S+ 0 0 7 -4,-1.7 4,-2.4 2,-0.2 -1,-0.2 0.878 110.5 56.6 -65.9 -41.4 -5.6 5.8 13.9 71 6 C E H X S+ 0 0 34 -4,-2.4 4,-2.2 1,-0.2 -2,-0.2 0.919 107.9 48.6 -58.5 -44.1 -2.3 7.8 13.7 72 7 C D H X S+ 0 0 64 -4,-2.5 4,-1.8 1,-0.2 -1,-0.2 0.862 110.3 50.2 -64.4 -36.4 -0.4 4.6 14.6 73 8 C K H X S+ 0 0 90 -4,-1.5 4,-1.7 2,-0.2 -1,-0.2 0.883 111.7 49.2 -69.5 -36.5 -2.2 2.5 12.0 74 9 C V H X S+ 0 0 1 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.886 108.6 52.2 -69.5 -39.2 -1.4 5.2 9.4 75 10 C E H X S+ 0 0 112 -4,-2.2 4,-1.8 1,-0.2 -1,-0.2 0.903 110.6 48.4 -65.6 -37.2 2.3 5.4 10.3 76 11 C E H X S+ 0 0 92 -4,-1.8 4,-2.3 1,-0.2 -1,-0.2 0.858 110.0 52.0 -70.3 -32.5 2.5 1.6 9.9 77 12 C L H X S+ 0 0 6 -4,-1.7 4,-2.2 2,-0.2 -2,-0.2 0.846 107.1 53.0 -70.0 -35.9 0.7 1.8 6.5 78 13 C L H X S+ 0 0 53 -4,-2.2 4,-1.7 2,-0.2 -2,-0.2 0.918 111.2 47.0 -64.7 -41.3 3.3 4.5 5.4 79 14 C S H X S+ 0 0 70 -4,-1.8 4,-2.0 2,-0.2 -2,-0.2 0.917 113.3 46.8 -65.4 -47.2 6.1 2.1 6.4 80 15 C K H X S+ 0 0 86 -4,-2.3 4,-2.5 1,-0.2 -1,-0.2 0.867 110.8 54.1 -62.1 -36.5 4.5 -0.9 4.6 81 16 C S H X S+ 0 0 13 -4,-2.2 4,-2.0 2,-0.2 -1,-0.2 0.865 107.6 49.5 -65.5 -38.7 3.9 1.3 1.5 82 17 C Y H X S+ 0 0 139 -4,-1.7 4,-1.8 2,-0.2 -2,-0.2 0.926 111.7 48.8 -66.3 -46.1 7.5 2.3 1.3 83 18 C H H X S+ 0 0 97 -4,-2.0 4,-2.2 1,-0.2 -2,-0.2 0.929 111.7 48.2 -61.2 -47.2 8.7 -1.3 1.6 84 19 C L H X S+ 0 0 5 -4,-2.5 4,-2.8 1,-0.2 -1,-0.2 0.873 107.8 54.9 -63.6 -36.4 6.3 -2.5 -1.1 85 20 C E H X S+ 0 0 70 -4,-2.0 4,-2.5 1,-0.2 -1,-0.2 0.895 109.6 48.1 -65.3 -36.0 7.3 0.3 -3.5 86 21 C N H X S+ 0 0 43 -4,-1.8 4,-2.2 2,-0.2 -2,-0.2 0.906 111.1 49.9 -70.5 -38.5 10.9 -0.8 -3.1 87 22 C E H X S+ 0 0 33 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.924 112.7 47.3 -62.7 -43.9 9.9 -4.5 -3.7 88 23 C V H X S+ 0 0 4 -4,-2.8 4,-2.5 2,-0.2 -2,-0.2 0.929 108.8 54.8 -63.7 -44.3 8.0 -3.5 -6.8 89 24 C A H X S+ 0 0 53 -4,-2.5 4,-2.1 1,-0.2 -1,-0.2 0.924 111.5 44.5 -55.2 -47.3 10.9 -1.3 -8.1 90 25 C R H X S+ 0 0 129 -4,-2.2 4,-2.4 2,-0.2 5,-0.2 0.938 110.7 53.1 -62.4 -49.0 13.3 -4.3 -7.9 91 26 C L H X S+ 0 0 6 -4,-2.5 4,-0.9 1,-0.2 -1,-0.2 0.903 111.0 50.0 -49.5 -45.8 10.8 -6.7 -9.5 92 27 C K H X S+ 0 0 55 -4,-2.5 4,-2.1 1,-0.2 3,-0.5 0.899 108.8 48.7 -63.3 -48.1 10.5 -4.2 -12.4 93 28 C K H < S+ 0 0 179 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.886 110.7 51.5 -64.4 -37.2 14.2 -3.8 -12.9 94 29 C L H < S+ 0 0 114 -4,-2.4 -1,-0.2 -62,-0.3 -2,-0.2 0.689 113.8 44.1 -73.4 -19.2 14.8 -7.5 -13.0 95 30 C V H < 0 0 41 -4,-0.9 -2,-0.2 -3,-0.5 -1,-0.2 0.742 360.0 360.0 -95.2 -27.7 12.0 -8.1 -15.5 96 31 C G < 0 0 99 -4,-2.1 -1,-0.2 -5,-0.1 -2,-0.2 -0.003 360.0 360.0 -99.3 360.0 12.9 -5.2 -17.8