==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-AUG-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/INHIBITOR 21-DEC-12 4IJH . COMPND 2 MOLECULE: REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.D.FELDKAMP,J.D.PATRONE,J.P.KENNEDY,A.O.FRANK,B.VANGAMUDI,N . 123 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7062.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 82 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 26.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -2 A G 0 0 84 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-175.5 18.0 -4.2 -10.2 2 -1 A S + 0 0 125 1,-0.2 4,-0.1 2,-0.1 0, 0.0 -0.164 360.0 37.6 -68.3 161.3 20.5 -1.4 -9.7 3 0 A H > - 0 0 128 1,-0.1 3,-2.0 2,-0.1 4,-0.2 0.965 68.5-176.6 61.1 57.0 20.5 0.8 -6.6 4 1 A M G > S+ 0 0 63 1,-0.3 3,-2.0 2,-0.2 4,-0.2 0.801 75.3 65.0 -61.6 -28.0 19.6 -2.1 -4.3 5 2 A V G > S+ 0 0 33 1,-0.3 3,-1.6 2,-0.2 -1,-0.3 0.788 88.3 70.9 -67.1 -21.4 19.4 0.1 -1.2 6 3 A G G < S+ 0 0 40 -3,-2.0 -1,-0.3 1,-0.3 -2,-0.2 0.600 84.3 71.2 -64.9 -12.0 16.5 1.8 -2.9 7 4 A Q G < S+ 0 0 44 -3,-2.0 2,-0.3 -4,-0.2 -1,-0.3 0.681 91.1 71.1 -72.4 -22.0 14.5 -1.4 -2.3 8 5 A L S < S- 0 0 9 -3,-1.6 2,-2.2 -4,-0.2 20,-0.2 -0.728 87.7-114.3-109.5 151.1 14.4 -0.7 1.5 9 6 A S > - 0 0 43 18,-3.0 3,-2.5 -2,-0.3 4,-0.3 -0.486 38.9-156.1 -80.4 72.4 12.5 1.8 3.6 10 7 A R T 3 S+ 0 0 123 -2,-2.2 42,-0.1 -5,-0.3 18,-0.0 -0.248 77.5 21.8 -51.3 125.5 15.5 3.8 4.8 11 8 A G T 3> S+ 0 0 30 43,-0.1 4,-2.0 40,-0.0 -1,-0.3 0.279 89.2 110.8 97.6 -7.5 14.6 5.5 8.1 12 9 A A H <> S+ 0 0 8 -3,-2.5 4,-2.6 1,-0.2 5,-0.2 0.869 73.7 55.5 -69.6 -36.0 11.7 3.2 9.0 13 10 A I H > S+ 0 0 0 -4,-0.3 4,-2.4 1,-0.2 5,-0.2 0.954 110.3 45.2 -62.9 -45.6 13.5 1.6 11.9 14 11 A A H >>S+ 0 0 20 1,-0.2 4,-2.8 2,-0.2 5,-0.6 0.895 112.6 52.6 -62.3 -37.8 14.2 5.0 13.5 15 12 A A H X>S+ 0 0 18 -4,-2.0 5,-1.4 1,-0.2 6,-1.3 0.918 111.2 46.3 -64.2 -41.5 10.5 5.9 12.8 16 13 A I H <5S+ 0 0 5 -4,-2.6 4,-0.2 4,-0.2 -2,-0.2 0.929 120.6 37.8 -65.4 -45.3 9.2 2.8 14.4 17 14 A M H <5S+ 0 0 30 -4,-2.4 -2,-0.2 -5,-0.2 -1,-0.2 0.812 128.8 28.1 -81.3 -29.4 11.5 3.1 17.5 18 15 A Q H <5S+ 0 0 134 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.1 0.851 132.7 27.3-100.3 -46.4 11.4 6.9 18.0 19 16 A K T < - 0 0 5 37,-2.6 3,-2.2 -2,-0.4 4,-0.4 -0.424 32.6-111.7 -56.6 147.1 4.0 -13.3 15.7 63 60 A T G > S+ 0 0 58 1,-0.3 3,-1.9 2,-0.2 -1,-0.1 0.852 117.1 65.8 -52.2 -35.4 3.4 -17.0 16.3 64 61 A Q G 3 S+ 0 0 114 1,-0.3 -1,-0.3 2,-0.1 36,-0.1 0.709 99.4 52.7 -64.1 -19.2 0.9 -17.0 13.5 65 62 A L G X> S+ 0 0 20 -3,-2.2 3,-2.0 34,-0.2 4,-0.7 0.443 75.7 103.8 -95.6 0.7 3.8 -16.3 11.1 66 63 A N H X> S+ 0 0 11 -3,-1.9 4,-2.3 -4,-0.4 3,-1.0 0.845 70.4 65.1 -51.8 -37.3 6.0 -19.2 12.2 67 64 A P H 3>>S+ 0 0 53 0, 0.0 4,-2.7 0, 0.0 5,-1.0 0.802 90.6 65.8 -62.0 -21.1 5.2 -21.3 9.2 68 65 A L H <>5S+ 0 0 45 -3,-2.0 6,-2.3 3,-0.2 4,-0.7 0.897 110.8 35.9 -64.5 -35.7 7.0 -18.7 7.0 69 66 A V H <<5S+ 0 0 34 -3,-1.0 4,-0.4 -4,-0.7 -1,-0.2 0.899 121.3 46.1 -79.5 -40.9 10.2 -19.6 8.6 70 67 A E H <5S+ 0 0 98 -4,-2.3 -2,-0.2 1,-0.1 -1,-0.1 0.824 134.4 5.1 -73.7 -29.1 9.5 -23.3 9.0 71 68 A E H <5S+ 0 0 128 -4,-2.7 -3,-0.2 -5,-0.2 -2,-0.1 0.610 122.7 53.1-132.6 -22.6 8.2 -24.0 5.5 72 69 A E S < - 0 0 39 -2,-0.6 3,-2.1 -3,-0.1 -45,-0.3 -0.927 55.6 -36.6-160.4 174.4 15.3 -16.5 5.7 76 73 A S T 3 S+ 0 0 44 -2,-0.3 -45,-0.2 1,-0.2 36,-0.2 -0.170 119.9 17.8 -51.7 131.6 18.4 -14.4 5.6 77 74 A N T 3 S+ 0 0 44 -47,-3.4 -1,-0.2 1,-0.3 36,-0.2 0.056 87.5 131.7 93.0 -15.4 18.5 -11.9 2.7 78 75 A C < - 0 0 1 -3,-2.1 -48,-2.7 -5,-0.1 2,-0.5 -0.304 50.6-137.4 -70.2 151.8 14.9 -11.9 1.8 79 76 A V E +AF 29 106A 2 27,-2.3 26,-2.2 -50,-0.2 27,-1.9 -0.944 29.2 177.0-110.3 125.6 13.2 -8.6 1.3 80 77 A C E -AF 28 104A 0 -52,-2.8 -52,-2.6 -2,-0.5 2,-0.5 -0.954 29.7-130.5-137.2 152.0 9.7 -8.2 2.8 81 78 A Q E -AF 27 103A 49 22,-2.5 22,-2.5 -2,-0.3 2,-0.8 -0.861 22.3-139.0 -98.6 130.0 7.0 -5.7 3.3 82 79 A I E + F 0 102A 1 -56,-2.9 20,-0.2 -2,-0.5 3,-0.2 -0.802 24.2 175.4 -90.4 108.2 5.6 -5.3 6.8 83 80 A H E + 0 0 59 18,-1.6 2,-0.3 -2,-0.8 19,-0.2 0.753 68.8 10.7 -85.6 -27.7 1.8 -5.0 6.5 84 81 A R E + F 0 101A 111 17,-1.8 16,-2.6 2,-0.0 17,-2.0 -0.939 69.6 153.0-153.0 133.4 1.0 -5.0 10.2 85 82 A F E - F 0 99A 6 -2,-0.3 2,-0.3 -63,-0.3 14,-0.2 -0.973 18.5-159.7-150.4 160.3 3.1 -4.8 13.3 86 83 A I E - F 0 98A 75 12,-1.9 12,-2.7 -2,-0.3 2,-0.5 -0.918 17.3-130.0-132.2 165.4 3.0 -3.6 16.9 87 84 A V E - F 0 97A 46 -2,-0.3 2,-0.4 10,-0.2 10,-0.2 -0.973 22.4-172.8-115.6 129.7 5.5 -2.7 19.5 88 85 A N E - F 0 96A 79 8,-2.6 8,-2.6 -2,-0.5 2,-0.4 -0.916 12.9-143.4-117.1 151.2 5.4 -4.2 22.9 89 86 A T E - F 0 95A 76 -2,-0.4 6,-0.2 6,-0.2 2,-0.1 -0.942 11.8-146.3-117.5 132.9 7.6 -3.2 25.9 90 87 A L > - 0 0 103 4,-2.7 3,-2.1 -2,-0.4 6,-0.0 -0.366 34.8 -94.0 -92.5 172.3 8.9 -5.7 28.4 91 88 A K T 3 S+ 0 0 217 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.817 123.2 56.9 -59.4 -32.3 9.5 -5.2 32.1 92 89 A D T 3 S- 0 0 103 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.517 119.7-107.6 -79.1 -4.6 13.1 -4.2 31.6 93 90 A G S < S+ 0 0 48 -3,-2.1 2,-0.1 1,-0.4 -2,-0.1 0.302 75.0 133.9 99.0 -8.8 12.1 -1.4 29.3 94 91 A R - 0 0 158 -5,-0.1 -4,-2.7 1,-0.0 -1,-0.4 -0.481 47.7-134.5 -73.6 149.7 13.3 -3.0 26.0 95 92 A R E - F 0 89A 131 -6,-0.2 2,-0.4 -2,-0.1 -6,-0.2 -0.767 13.0-161.5-109.6 147.5 11.0 -2.9 23.1 96 93 A V E - F 0 88A 26 -8,-2.6 -8,-2.6 -2,-0.3 2,-0.7 -0.998 12.5-144.3-130.0 128.8 10.1 -5.7 20.7 97 94 A V E -eF 59 87A 0 -39,-2.9 -37,-2.5 -2,-0.4 2,-0.6 -0.850 18.4-155.1 -95.9 110.8 8.6 -5.1 17.3 98 95 A I E -eF 60 86A 25 -12,-2.7 -12,-1.9 -2,-0.7 2,-0.6 -0.824 6.1-143.9 -94.5 118.5 6.2 -7.9 16.6 99 96 A L E +eF 61 85A 1 -39,-2.9 -37,-2.6 -2,-0.6 -14,-0.2 -0.718 24.8 171.1 -82.3 117.4 5.6 -8.6 12.9 100 97 A M E + 0 0 35 -16,-2.6 2,-0.4 -2,-0.6 -15,-0.2 0.788 68.0 14.7 -99.3 -36.8 1.9 -9.6 12.5 101 98 A E E S+ F 0 84A 93 -17,-2.0 -17,-1.8 2,-0.0 -18,-1.6 -0.989 70.6 164.1-140.7 132.3 1.6 -9.6 8.7 102 99 A L E - F 0 82A 22 -2,-0.4 2,-0.4 -20,-0.2 -20,-0.2 -0.994 22.5-149.3-149.3 154.3 4.3 -9.6 6.2 103 100 A E E - F 0 81A 90 -22,-2.5 -22,-2.5 -2,-0.3 2,-0.8 -0.979 18.6-133.0-121.4 130.4 4.8 -10.3 2.5 104 101 A V E + F 0 80A 60 -2,-0.4 -24,-0.3 -24,-0.2 3,-0.2 -0.764 25.2 177.4 -83.5 114.5 8.0 -11.6 1.0 105 102 A L E S+ 0 0 71 -26,-2.2 2,-0.4 -2,-0.8 -25,-0.2 0.823 73.1 17.6 -82.6 -38.5 8.7 -9.4 -2.0 106 103 A K E S- F 0 79A 76 -27,-1.9 -27,-2.3 -29,-0.0 -1,-0.3 -0.988 82.5-125.4-138.3 128.4 11.9 -11.0 -3.0 107 104 A S >> - 0 0 49 -2,-0.4 4,-0.8 -29,-0.2 3,-0.6 -0.218 29.4-109.2 -65.0 159.5 13.2 -14.4 -1.9 108 105 A A H >> S+ 0 0 7 -35,-0.4 4,-2.4 1,-0.2 3,-0.9 0.894 121.3 53.7 -52.5 -41.2 16.6 -14.8 -0.3 109 106 A E H 34 S+ 0 0 123 1,-0.3 -1,-0.2 2,-0.2 -32,-0.0 0.784 106.2 52.0 -71.8 -26.2 17.8 -16.5 -3.4 110 107 A A H <4 S+ 0 0 65 -3,-0.6 -1,-0.3 1,-0.1 -2,-0.2 0.556 120.9 32.5 -83.1 -13.7 16.7 -13.6 -5.6 111 108 A V H << S+ 0 0 15 -3,-0.9 -2,-0.2 -4,-0.8 -3,-0.2 0.765 77.6 178.1-106.4 -60.8 18.5 -11.0 -3.5 112 109 A G < + 0 0 44 -4,-2.4 2,-0.3 -5,-0.2 -3,-0.1 0.266 52.0 57.7 87.6 -11.5 21.5 -13.0 -2.3 113 110 A V S S- 0 0 77 -36,-0.2 2,-0.6 -5,-0.1 -1,-0.0 -0.974 88.9 -94.6-149.1 155.1 23.3 -10.3 -0.3 114 111 A K - 0 0 113 -2,-0.3 2,-0.2 2,-0.1 -83,-0.1 -0.687 51.6-127.1 -69.4 117.6 23.0 -7.9 2.6 115 112 A I - 0 0 2 -2,-0.6 -63,-0.2 -111,-0.1 -86,-0.1 -0.491 61.6 -23.2 -74.2 135.6 21.9 -4.7 0.9 116 113 A G S S- 0 0 49 -2,-0.2 -63,-0.1 1,-0.2 -2,-0.1 -0.227 92.2 -68.8 64.8-154.9 23.9 -1.6 1.7 117 114 A N - 0 0 137 -65,-0.7 -1,-0.2 2,-0.0 -2,-0.1 -0.541 58.4-177.1-137.3 62.6 25.9 -1.1 4.8 118 115 A P - 0 0 9 0, 0.0 -64,-0.3 0, 0.0 -65,-0.1 -0.344 9.5-152.8 -70.1 148.1 23.5 -0.8 7.6 119 116 A V E -d 54 0A 81 -66,-2.4 -64,-1.8 1,-0.1 -66,-0.0 -0.847 31.8 -81.7-118.9 156.1 24.6 -0.2 11.2 120 117 A P E -d 55 0A 83 0, 0.0 2,-0.4 0, 0.0 -64,-0.2 -0.277 39.1-126.0 -60.5 137.6 23.0 -1.1 14.5 121 118 A Y - 0 0 33 -66,-2.6 2,-0.9 2,-0.1 -64,-0.2 -0.663 22.9-134.3 -78.0 132.9 20.3 1.1 15.8 122 119 A N 0 0 142 -2,-0.4 -1,-0.0 1,-0.1 -66,-0.0 -0.801 360.0 360.0-100.8 102.0 21.1 2.2 19.3 123 120 A E 0 0 205 -2,-0.9 -1,-0.1 -28,-0.0 -28,-0.1 0.308 360.0 360.0 46.6 360.0 18.1 1.8 21.6