==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-APR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 29-DEC-12 4IL7 . COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS; . AUTHOR A.K.SENDAMARAI,C.M.LAWRENCE . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4703.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 70.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 49 57.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 138 A E 0 0 114 0, 0.0 84,-2.8 0, 0.0 2,-0.6 0.000 360.0 360.0 360.0 131.0 7.9 10.6 5.3 2 139 A N E -A 84 0A 106 82,-0.2 2,-0.5 80,-0.0 82,-0.2 -0.931 360.0-156.8-111.8 113.3 8.1 14.3 4.2 3 140 A Y E -A 83 0A 141 80,-2.9 80,-2.5 -2,-0.6 2,-0.3 -0.800 18.5-131.0 -96.3 119.9 6.3 15.2 0.9 4 141 A L E +A 82 0A 109 -2,-0.5 78,-0.3 78,-0.2 3,-0.1 -0.533 32.9 167.0 -72.2 132.5 7.7 18.4 -0.7 5 142 A I E - 0 0 25 76,-2.6 2,-0.3 1,-0.3 77,-0.2 0.783 62.4 -8.9-110.5 -45.9 5.0 20.9 -1.7 6 143 A Y E -A 81 0A 40 75,-2.2 75,-3.0 11,-0.0 2,-0.4 -0.979 46.6-175.4-156.6 139.9 7.0 24.1 -2.5 7 144 A S E +A 80 0A 75 -2,-0.3 2,-0.3 73,-0.2 73,-0.2 -0.964 38.1 107.2-133.5 129.3 10.5 25.6 -2.3 8 145 A G E -A 79 0A 6 71,-2.6 71,-3.1 -2,-0.4 2,-0.3 -0.888 49.9 -98.0-172.6-156.2 11.2 29.2 -3.2 9 146 A F E +A 78 0A 158 -2,-0.3 2,-0.4 69,-0.3 3,-0.2 -0.949 60.2 43.8-150.9 147.0 12.0 32.7 -2.3 10 147 A G E S-A 77 0A 18 67,-2.0 67,-2.2 -2,-0.3 65,-0.1 -0.904 90.4 -57.4 125.7-138.5 10.4 36.1 -1.7 11 148 A T E S+ 0 0 58 -2,-0.4 62,-2.4 65,-0.2 2,-0.3 0.321 106.2 26.1-131.8 3.8 7.3 37.2 0.2 12 149 A S E S-A 72 0A 63 -3,-0.2 -1,-0.2 60,-0.2 60,-0.2 -0.973 78.6 -95.0-157.6 175.4 4.4 35.3 -1.5 13 150 A L - 0 0 22 58,-0.6 58,-0.1 -2,-0.3 -3,-0.0 -0.756 16.7-143.6 -99.2 141.6 3.5 32.2 -3.5 14 151 A P S S+ 0 0 96 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.618 81.7 0.5 -78.4 -15.9 3.4 32.0 -7.3 15 152 A Q S S- 0 0 129 53,-0.0 2,-0.3 0, 0.0 -2,-0.0 -0.889 81.9 -88.3-150.8 176.8 0.4 29.5 -7.3 16 153 A T - 0 0 69 -2,-0.3 2,-0.3 54,-0.0 53,-0.2 -0.660 40.7-151.0 -87.6 155.5 -2.0 27.7 -5.0 17 154 A Y E -B 68 0A 21 51,-1.4 51,-2.8 -2,-0.3 2,-0.5 -0.968 6.9-136.4-131.2 150.1 -1.0 24.2 -3.7 18 155 A T E -B 67 0A 78 -2,-0.3 49,-0.2 49,-0.2 48,-0.1 -0.895 16.4-135.0-107.6 128.5 -3.0 21.1 -2.7 19 156 A I - 0 0 0 47,-3.2 46,-3.1 -2,-0.5 47,-0.2 -0.722 17.4-154.8 -81.7 125.6 -2.0 19.2 0.4 20 157 A P + 0 0 59 0, 0.0 2,-0.3 0, 0.0 44,-0.1 0.652 60.0 11.4 -83.7 -17.6 -2.1 15.5 -0.7 21 158 A A S S- 0 0 33 42,-0.1 2,-0.3 43,-0.1 45,-0.2 -0.902 83.6 -79.3-148.4 169.4 -2.7 13.7 2.6 22 159 A N S S+ 0 0 113 -2,-0.3 2,-0.3 41,-0.2 41,-0.2 -0.626 81.5 80.7 -68.9 138.5 -3.6 13.8 6.2 23 160 A G E S-C 62 0A 20 39,-2.4 39,-2.7 -2,-0.3 2,-0.5 -0.983 82.3 -38.4 163.0-150.3 -0.7 15.0 8.3 24 161 A Y E -CD 61 84A 108 60,-2.2 60,-2.8 -2,-0.3 2,-0.5 -0.952 43.1-143.0-114.3 120.5 1.2 18.1 9.4 25 162 A L E -CD 60 83A 0 35,-3.0 35,-2.5 -2,-0.5 2,-0.5 -0.673 18.9-159.1 -76.1 125.3 1.9 20.9 7.1 26 163 A I E -CD 59 82A 0 56,-3.2 56,-2.3 -2,-0.5 2,-0.6 -0.951 11.7-174.1-112.6 125.5 5.3 22.4 7.7 27 164 A I E -CD 58 81A 0 31,-2.5 31,-2.0 -2,-0.5 2,-0.6 -0.970 6.0-169.3-117.2 110.9 6.2 25.9 6.6 28 165 A S E -CD 57 80A 20 52,-3.2 52,-2.1 -2,-0.6 2,-0.6 -0.920 3.4-174.2-105.0 112.6 9.8 26.7 7.2 29 166 A I E -CD 56 79A 0 27,-2.1 27,-3.1 -2,-0.6 2,-0.4 -0.934 6.7-176.9-110.7 118.0 10.6 30.4 6.7 30 167 A T E + D 0 78A 71 48,-2.3 48,-2.7 -2,-0.6 2,-0.3 -0.938 17.2 132.7-121.8 138.9 14.2 31.3 6.9 31 168 A N - 0 0 42 -2,-0.4 46,-0.1 2,-0.4 -2,-0.0 -0.897 68.3 -76.8-162.6-171.7 15.8 34.7 6.7 32 169 A T S S+ 0 0 156 -2,-0.3 2,-0.2 2,-0.0 45,-0.1 0.402 107.8 52.7 -85.9 5.6 18.5 36.7 8.6 33 170 A S S S- 0 0 82 2,-0.1 -2,-0.4 0, 0.0 2,-0.3 -0.558 73.3-128.7-125.9-172.9 16.1 37.6 11.5 34 171 A T + 0 0 124 -2,-0.2 2,-0.2 -4,-0.1 22,-0.1 -0.946 55.5 39.9-135.2 157.5 13.8 35.9 13.9 35 172 A G S S+ 0 0 22 -2,-0.3 20,-2.6 20,-0.2 2,-0.1 -0.647 93.0 7.3 109.4-161.5 10.1 36.3 15.0 36 173 A N E +E 54 0A 109 18,-0.2 18,-0.3 -2,-0.2 3,-0.1 -0.348 55.4 165.7 -61.8 141.2 6.8 37.0 13.3 37 174 A I E - 0 0 6 16,-2.8 37,-2.5 1,-0.3 38,-0.5 0.503 48.0 -68.6-137.8 -11.1 7.1 37.0 9.5 38 175 A G E -EF 53 73A 11 15,-1.4 15,-2.7 35,-0.3 2,-0.3 -0.997 51.0 -64.1 158.2-148.2 3.6 36.9 8.0 39 176 A Q E -EF 52 72A 105 33,-2.1 33,-2.4 -2,-0.3 2,-0.3 -0.969 21.0-160.3-144.8 148.9 0.5 34.9 7.3 40 177 A I E -EF 51 71A 0 11,-2.0 11,-2.8 -2,-0.3 2,-0.4 -0.990 10.7-152.0-132.1 145.8 -0.8 31.9 5.5 41 178 A T E -EF 50 70A 24 29,-2.7 28,-2.0 -2,-0.3 29,-1.3 -0.961 12.5-174.6-118.7 130.3 -4.3 31.0 4.4 42 179 A L E -EF 49 68A 0 7,-2.3 7,-2.5 -2,-0.4 2,-0.4 -0.935 6.2-161.2-118.5 147.5 -5.6 27.5 4.0 43 180 A T E +EF 48 67A 37 24,-2.2 24,-3.1 -2,-0.3 2,-0.4 -0.992 10.7 174.9-130.0 137.5 -9.0 26.3 2.8 44 181 A I E > -E 47 0A 43 3,-2.5 3,-2.7 -2,-0.4 22,-0.1 -0.972 66.0 -49.1-139.1 119.1 -10.6 22.9 3.3 45 182 A G T 3 S- 0 0 82 -2,-0.4 20,-0.0 1,-0.3 0, 0.0 -0.319 125.5 -15.7 57.6-122.5 -14.1 22.4 2.0 46 183 A S T 3 S+ 0 0 128 -3,-0.1 2,-0.4 -2,-0.1 -1,-0.3 0.304 119.0 95.6 -97.4 10.5 -16.2 25.3 3.2 47 184 A T E < -E 44 0A 73 -3,-2.7 -3,-2.5 2,-0.0 2,-0.4 -0.862 51.0-167.3-109.0 132.4 -13.7 26.4 5.8 48 185 A T E -E 43 0A 94 -2,-0.4 2,-0.3 -5,-0.2 -5,-0.2 -0.895 9.3-170.3-112.1 138.0 -11.0 29.1 5.5 49 186 A M E -E 42 0A 57 -7,-2.5 -7,-2.3 -2,-0.4 2,-0.4 -0.996 9.3-159.3-127.9 141.6 -8.2 29.5 8.1 50 187 A T E -E 41 0A 84 -2,-0.3 2,-0.4 -9,-0.2 -9,-0.2 -0.989 14.5-170.9-122.2 129.0 -5.6 32.2 8.6 51 188 A F E -E 40 0A 62 -11,-2.8 -11,-2.0 -2,-0.4 2,-0.2 -0.959 22.9-122.3-124.9 139.6 -2.4 31.5 10.5 52 189 A N E -E 39 0A 95 -2,-0.4 2,-0.4 -13,-0.2 -13,-0.2 -0.490 28.6-149.3 -66.9 138.5 0.4 33.6 11.8 53 190 A L E -E 38 0A 0 -15,-2.7 -16,-2.8 -2,-0.2 -15,-1.4 -0.943 13.6-174.6-113.6 141.7 3.9 32.6 10.6 54 191 A Q E -E 36 0A 98 -2,-0.4 -25,-0.4 -18,-0.3 -18,-0.2 -0.848 40.4 -83.9-116.9 166.6 7.1 33.0 12.5 55 192 A T S S+ 0 0 28 -20,-2.6 2,-0.2 -2,-0.3 -25,-0.2 -0.328 100.0 26.1 -65.2 156.4 10.6 32.3 11.3 56 193 A G E S-C 29 0A 29 -27,-3.1 -27,-2.1 2,-0.1 2,-0.4 -0.625 116.5 -6.7 83.6-152.5 11.7 28.7 11.6 57 194 A E E -C 28 0A 129 -2,-0.2 2,-0.5 -29,-0.2 -29,-0.2 -0.647 52.6-173.0 -89.7 130.5 9.1 25.8 11.5 58 195 A N E -C 27 0A 19 -31,-2.0 -31,-2.5 -2,-0.4 2,-0.5 -0.986 12.2-163.0-117.8 122.3 5.4 26.5 11.6 59 196 A K E +C 26 0A 118 -2,-0.5 -33,-0.2 -33,-0.2 -35,-0.0 -0.956 11.5 175.6-121.5 125.7 3.4 23.2 12.0 60 197 A I E -C 25 0A 14 -35,-2.5 -35,-3.0 -2,-0.5 2,-0.2 -0.986 29.9-125.8-133.4 118.5 -0.3 22.9 11.2 61 198 A P E +C 24 0A 94 0, 0.0 2,-0.3 0, 0.0 -37,-0.2 -0.489 40.1 176.7 -60.0 133.5 -2.5 19.8 11.2 62 199 A V E -C 23 0A 14 -39,-2.7 -39,-2.4 -2,-0.2 2,-0.3 -0.970 25.4-134.9-140.7 153.0 -4.2 19.4 7.9 63 200 A I > - 0 0 95 -2,-0.3 3,-2.0 -41,-0.2 -41,-0.2 -0.740 47.2 -76.3-105.5 156.1 -6.5 16.9 6.1 64 201 A A T 3 S+ 0 0 45 -2,-0.3 -42,-0.1 1,-0.2 -1,-0.1 -0.216 115.7 25.2 -49.0 132.5 -6.1 15.7 2.6 65 202 A G T 3 S+ 0 0 38 -46,-3.1 -1,-0.2 1,-0.3 -20,-0.2 0.323 79.6 148.4 90.0 -2.7 -7.1 18.1 -0.1 66 203 A T < - 0 0 2 -3,-2.0 -47,-3.2 -47,-0.2 2,-0.4 -0.340 40.0-137.9 -56.6 138.3 -6.6 21.3 2.0 67 204 A Q E -BF 18 43A 53 -24,-3.1 -24,-2.2 -49,-0.2 2,-0.8 -0.859 8.5-143.0-103.6 139.4 -5.5 24.1 -0.3 68 205 A I E +BF 17 42A 0 -51,-2.8 -51,-1.4 -2,-0.4 -26,-0.2 -0.879 30.1 170.1 -91.0 103.9 -2.8 26.7 0.4 69 206 A T E + 0 0 55 -28,-2.0 2,-0.3 -2,-0.8 -27,-0.2 0.753 54.9 1.7 -93.1 -26.4 -4.4 29.7 -1.1 70 207 A N E - F 0 41A 70 -29,-1.3 -29,-2.7 -58,-0.0 2,-0.3 -0.981 46.6-175.2-156.1 149.2 -2.2 32.6 -0.0 71 208 A M E - F 0 40A 0 -2,-0.3 -58,-0.6 -31,-0.2 2,-0.4 -0.972 8.9-174.8-142.3 139.5 0.9 33.4 1.9 72 209 A T E -AF 12 39A 73 -33,-2.4 -33,-2.1 -2,-0.3 2,-0.3 -0.974 5.2-168.3-135.0 119.6 2.2 37.0 2.6 73 210 A L E - F 0 38A 10 -62,-2.4 -35,-0.3 -2,-0.4 3,-0.1 -0.790 23.2-139.6-105.4 153.2 5.5 37.7 4.3 74 211 A T E S+ 0 0 116 -37,-2.5 2,-0.3 -2,-0.3 -36,-0.1 0.581 88.4 19.7 -87.8 -15.1 6.8 41.0 5.7 75 212 A S E S- 0 0 55 -38,-0.5 -1,-0.2 -65,-0.1 -65,-0.1 -0.989 97.9 -82.3-152.3 150.5 10.3 40.6 4.4 76 213 A S E + 0 0 86 -2,-0.3 2,-0.3 -3,-0.1 -65,-0.2 -0.291 58.9 161.0 -60.8 135.5 11.9 38.4 1.8 77 214 A S E -A 10 0A 6 -67,-2.2 -67,-2.0 -46,-0.1 2,-0.4 -0.928 46.3 -95.9-143.6 164.5 12.7 35.0 2.9 78 215 A A E -AD 9 30A 28 -48,-2.7 -48,-2.3 -2,-0.3 2,-0.5 -0.771 43.1-155.3 -82.5 137.0 13.4 31.4 1.9 79 216 A I E +AD 8 29A 2 -71,-3.1 -71,-2.6 -2,-0.4 2,-0.4 -0.964 17.4 176.1-124.7 121.1 10.2 29.5 1.9 80 217 A L E -AD 7 28A 60 -52,-2.1 -52,-3.2 -2,-0.5 2,-0.4 -0.992 4.1-178.7-125.4 124.9 10.0 25.7 2.3 81 218 A I E +AD 6 27A 0 -75,-3.0 -76,-2.6 -2,-0.4 -75,-2.2 -0.996 16.1 144.6-126.8 125.9 6.6 24.0 2.5 82 219 A Y E -AD 4 26A 33 -56,-2.3 -56,-3.2 -2,-0.4 2,-0.4 -0.939 38.0-122.1-149.4 168.9 6.3 20.2 2.9 83 220 A E E -AD 3 25A 0 -80,-2.5 -80,-2.9 -2,-0.3 2,-0.6 -0.983 9.7-142.8-123.3 130.3 3.9 17.7 4.7 84 221 A E E AD 2 24A 63 -60,-2.8 -60,-2.2 -2,-0.4 -82,-0.2 -0.800 360.0 360.0 -83.6 119.6 4.8 15.1 7.3 85 222 A V 0 0 82 -84,-2.8 -62,-0.2 -2,-0.6 -2,-0.0 -0.715 360.0 360.0-124.2 360.0 2.6 12.1 6.5