==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 11-MAY-01 1IMU . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HI0257; . SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; . AUTHOR L.PARSONS,E.EISENSTEIN,J.ORBAN,STRUCTURE 2 FUNCTION PROJECT . 107 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7860.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 61.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 2.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 15.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 8.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 29.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 167 0, 0.0 2,-0.5 0, 0.0 33,-0.1 0.000 360.0 360.0 360.0 118.7 6.0 -5.1 -8.3 2 2 A T - 0 0 89 35,-0.1 2,-0.8 32,-0.0 19,-0.0 -0.941 360.0-121.6-115.7 131.0 2.3 -4.8 -9.1 3 3 A L - 0 0 4 -2,-0.5 35,-0.2 33,-0.1 2,-0.1 -0.563 35.4-157.1 -71.7 105.6 -0.4 -4.2 -6.4 4 4 A N E -a 38 0A 60 33,-3.2 35,-0.5 -2,-0.8 2,-0.3 -0.415 1.6-145.4 -83.1 160.4 -2.7 -7.1 -6.8 5 5 A I E +a 39 0A 40 33,-0.2 35,-0.2 1,-0.1 7,-0.1 -0.852 23.0 175.9-124.7 161.1 -6.4 -7.2 -5.6 6 6 A T - 0 0 79 33,-1.6 34,-0.2 -2,-0.3 -1,-0.1 0.608 13.8-179.0-126.3 -53.6 -8.7 -9.8 -4.2 7 7 A S - 0 0 12 32,-0.6 35,-0.2 1,-0.1 5,-0.1 0.916 20.5-149.7 42.9 96.2 -12.0 -8.0 -3.4 8 8 A K S S- 0 0 157 33,-0.7 34,-0.1 3,-0.1 -1,-0.1 0.855 84.8 -2.6 -59.5 -37.4 -14.3 -10.7 -1.9 9 9 A Q S S+ 0 0 78 32,-0.5 33,-0.1 1,-0.3 32,-0.0 0.541 118.2 60.1-118.1 -93.4 -17.4 -8.9 -3.3 10 10 A M S S- 0 0 35 1,-0.1 -1,-0.3 33,-0.0 31,-0.1 -0.205 82.0-132.5 -46.8 112.7 -17.1 -5.6 -5.3 11 11 A D - 0 0 135 1,-0.1 2,-0.3 -3,-0.1 -4,-0.1 0.020 27.0 -90.6 -60.2 175.7 -14.9 -6.4 -8.3 12 12 A I + 0 0 56 -5,-0.1 -1,-0.1 -6,-0.1 3,-0.0 -0.685 46.7 173.6 -94.8 147.4 -12.0 -4.2 -9.3 13 13 A T > - 0 0 77 -2,-0.3 4,-2.5 1,-0.0 5,-0.4 -0.884 50.3 -80.8-142.6 172.0 -12.4 -1.3 -11.7 14 14 A P H > S+ 0 0 96 0, 0.0 4,-3.0 0, 0.0 5,-0.4 0.871 125.8 51.9 -41.6 -49.3 -10.3 1.6 -13.2 15 15 A A H > S+ 0 0 53 2,-0.2 4,-3.4 3,-0.2 5,-0.1 0.983 119.7 30.3 -53.2 -73.6 -11.0 3.7 -10.1 16 16 A I H > S+ 0 0 13 2,-0.2 4,-3.0 1,-0.2 5,-0.4 0.966 123.2 49.7 -49.1 -65.3 -10.0 1.2 -7.4 17 17 A R H X S+ 0 0 149 -4,-2.5 4,-3.3 1,-0.3 5,-0.3 0.902 116.9 40.8 -39.1 -61.2 -7.3 -0.4 -9.6 18 18 A E H X S+ 0 0 113 -4,-3.0 4,-3.4 -5,-0.4 -1,-0.3 0.878 118.0 50.9 -58.2 -38.6 -5.8 2.9 -10.6 19 19 A H H X S+ 0 0 27 -4,-3.4 4,-3.5 -5,-0.4 5,-0.2 0.999 114.5 39.2 -61.6 -68.5 -6.3 4.0 -6.9 20 20 A L H X S+ 0 0 0 -4,-3.0 4,-2.9 1,-0.2 -2,-0.2 0.913 120.2 48.3 -46.3 -51.3 -4.6 1.0 -5.3 21 21 A E H X S+ 0 0 89 -4,-3.3 4,-3.4 -5,-0.4 5,-0.3 0.959 112.0 47.9 -55.6 -54.4 -2.0 1.1 -8.0 22 22 A E H X S+ 0 0 120 -4,-3.4 4,-2.2 -5,-0.3 -1,-0.2 0.903 111.6 51.8 -53.5 -43.0 -1.4 4.8 -7.7 23 23 A R H X S+ 0 0 37 -4,-3.5 4,-2.6 2,-0.2 -1,-0.2 0.930 111.0 47.0 -60.2 -45.9 -1.2 4.3 -3.9 24 24 A L H X S+ 0 0 16 -4,-2.9 4,-1.1 2,-0.2 -2,-0.2 0.960 112.2 48.9 -60.0 -51.6 1.4 1.5 -4.4 25 25 A A H X S+ 0 0 73 -4,-3.4 4,-0.5 1,-0.3 -1,-0.2 0.843 112.3 51.1 -56.5 -32.6 3.4 3.7 -6.9 26 26 A K H >< S+ 0 0 130 -4,-2.2 3,-0.8 -5,-0.3 4,-0.3 0.884 108.6 49.3 -71.9 -39.2 3.1 6.4 -4.2 27 27 A L H >< S+ 0 0 4 -4,-2.6 3,-0.7 1,-0.2 -1,-0.2 0.589 93.6 80.2 -75.7 -9.3 4.4 4.1 -1.6 28 28 A G H 3< S+ 0 0 40 -4,-1.1 4,-0.4 1,-0.2 -1,-0.2 0.868 84.4 58.5 -64.4 -35.9 7.2 3.2 -3.9 29 29 A K T << S+ 0 0 167 -3,-0.8 -1,-0.2 -4,-0.5 -2,-0.2 0.742 90.6 98.5 -64.0 -24.1 9.1 6.4 -3.0 30 30 A W S < S- 0 0 43 -3,-0.7 2,-3.5 -4,-0.3 -3,-0.0 -0.300 99.5 -93.3 -67.7 150.4 9.0 5.1 0.6 31 31 A Q S S+ 0 0 127 2,-0.1 2,-0.3 -2,-0.0 -1,-0.2 -0.305 97.5 83.8 -61.5 67.2 12.0 3.4 2.1 32 32 A T - 0 0 12 -2,-3.5 2,-0.4 -4,-0.4 24,-0.1 -0.988 67.5-137.9-165.9 162.2 10.6 -0.0 1.1 33 33 A Q - 0 0 111 -2,-0.3 2,-0.6 22,-0.1 -5,-0.1 -0.878 33.3-128.1-132.1 94.5 10.3 -2.6 -1.7 34 34 A L - 0 0 12 -2,-0.4 2,-1.5 1,-0.1 22,-0.2 -0.220 18.7-151.5 -48.5 96.8 6.8 -4.0 -1.8 35 35 A I S S- 0 0 98 20,-2.8 -1,-0.1 -2,-0.6 21,-0.1 -0.570 75.0 -30.1 -74.5 90.4 7.5 -7.7 -1.7 36 36 A S S S- 0 0 82 -2,-1.5 2,-0.3 1,-0.1 -1,-0.3 0.936 83.7-145.2 59.5 94.0 4.4 -8.9 -3.6 37 37 A P + 0 0 2 0, 0.0 -33,-3.2 0, 0.0 2,-0.3 -0.734 21.9 174.7 -96.5 140.7 1.7 -6.3 -2.8 38 38 A H E -aB 4 53A 72 15,-1.9 15,-1.5 -2,-0.3 2,-0.3 -0.839 19.2-151.3-134.0 172.0 -2.1 -7.1 -2.4 39 39 A F E -aB 5 52A 6 -35,-0.5 -33,-1.6 -2,-0.3 2,-1.4 -0.816 3.5-159.2-152.3 106.4 -5.2 -5.3 -1.4 40 40 A V E - B 0 51A 33 11,-2.5 11,-1.7 -2,-0.3 2,-0.3 -0.693 25.2-176.3 -88.8 89.2 -8.2 -7.0 0.2 41 41 A L E + B 0 50A 0 -2,-1.4 -33,-0.7 9,-0.2 -32,-0.5 -0.690 7.0 165.3 -90.3 139.7 -11.0 -4.5 -0.7 42 42 A N E - B 0 49A 18 7,-1.5 7,-0.6 -2,-0.3 2,-0.3 -0.985 20.5-150.5-151.3 160.1 -14.5 -4.9 0.6 43 43 A K E - B 0 48A 96 -2,-0.3 5,-0.3 5,-0.3 3,-0.1 -0.817 11.6-174.9-125.7 167.5 -17.8 -3.1 1.0 44 44 A V E > - B 0 47A 39 3,-3.3 3,-2.6 -2,-0.3 23,-0.0 -0.989 41.0-103.7-160.8 157.6 -20.7 -3.3 3.4 45 45 A P T 3 S+ 0 0 131 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.875 123.0 48.4 -50.0 -43.1 -24.2 -1.8 4.1 46 46 A N T 3 S- 0 0 143 1,-0.1 2,-0.3 -3,-0.1 22,-0.1 0.355 133.4 -69.9 -81.1 5.6 -22.8 0.4 6.9 47 47 A G E < S-B 44 0A 2 -3,-2.6 -3,-3.3 21,-0.1 2,-0.4 -1.000 71.8 -40.1 148.2-146.2 -20.0 1.5 4.6 48 48 A F E -BC 43 67A 41 19,-3.5 19,-2.4 -2,-0.3 2,-0.6 -0.991 39.2-157.2-128.2 128.6 -16.9 0.2 3.0 49 49 A S E -BC 42 66A 26 -7,-0.6 -7,-1.5 -2,-0.4 2,-0.3 -0.918 17.6-179.9-109.6 120.3 -14.4 -2.2 4.6 50 50 A V E -BC 41 65A 2 15,-3.3 15,-3.2 -2,-0.6 2,-0.3 -0.884 9.6-176.6-119.4 150.7 -10.9 -2.2 3.2 51 51 A E E -BC 40 64A 75 -11,-1.7 -11,-2.5 -2,-0.3 2,-0.3 -0.940 7.9-159.8-150.5 122.8 -7.8 -4.1 4.1 52 52 A A E -BC 39 63A 0 11,-0.9 11,-2.5 -2,-0.3 2,-0.3 -0.742 7.2-176.8-103.9 151.8 -4.3 -3.9 2.6 53 53 A S E +BC 38 62A 30 -15,-1.5 -15,-1.9 -2,-0.3 9,-0.3 -0.790 14.9 155.1-152.1 103.2 -1.5 -6.4 2.7 54 54 A I E - C 0 61A 7 7,-1.7 7,-2.4 -2,-0.3 2,-0.4 -0.681 32.1-121.3-120.2 174.8 2.0 -5.8 1.3 55 55 A G - 0 0 6 5,-0.3 -20,-2.8 -2,-0.2 5,-0.2 -0.922 22.3-179.7-123.4 148.9 5.5 -7.1 2.0 56 56 A T > - 0 0 5 -2,-0.4 3,-1.3 -22,-0.2 -22,-0.1 -0.996 39.0-124.2-145.7 139.1 8.7 -5.5 3.0 57 57 A P T 3 S+ 0 0 70 0, 0.0 3,-0.1 0, 0.0 -25,-0.1 0.703 120.1 46.4 -52.6 -17.6 12.2 -6.8 3.7 58 58 A L T 3 S- 0 0 95 1,-0.3 2,-0.2 27,-0.0 -26,-0.0 0.669 135.2 -34.9 -98.2 -22.1 11.7 -5.1 7.1 59 59 A G < - 0 0 22 -3,-1.3 -1,-0.3 2,-0.0 29,-0.1 -0.562 66.0 -89.9 161.7 132.3 8.2 -6.5 7.7 60 60 A N - 0 0 122 -5,-0.2 2,-0.3 -2,-0.2 -5,-0.3 -0.230 43.5-129.9 -54.6 137.5 5.0 -7.4 5.9 61 61 A L E +C 54 0A 0 -7,-2.4 -7,-1.7 2,-0.0 2,-0.3 -0.729 33.6 165.3 -93.8 141.2 2.6 -4.5 5.6 62 62 A L E +C 53 0A 88 -2,-0.3 2,-0.3 -9,-0.3 -9,-0.3 -0.992 3.1 158.6-152.8 151.1 -1.1 -5.0 6.6 63 63 A A E -C 52 0A 5 -11,-2.5 -11,-0.9 -2,-0.3 2,-0.3 -0.982 12.0-171.6-166.3 163.6 -4.1 -2.7 7.3 64 64 A S E +C 51 0A 76 -13,-0.3 2,-0.3 -2,-0.3 -13,-0.3 -0.899 9.4 168.2-166.8 134.5 -7.8 -2.6 7.5 65 65 A A E -C 50 0A 18 -15,-3.2 -15,-3.3 -2,-0.3 2,-0.4 -0.979 19.0-147.2-148.5 159.1 -10.5 0.0 8.0 66 66 A T E +C 49 0A 92 -2,-0.3 2,-0.3 -17,-0.3 -17,-0.2 -0.996 32.7 134.8-132.4 130.8 -14.3 0.5 7.7 67 67 A S E -C 48 0A 40 -19,-2.4 -19,-3.5 -2,-0.4 -23,-0.1 -0.981 60.5-113.4-167.4 159.6 -16.1 3.7 6.6 68 68 A D S S+ 0 0 113 -21,-0.3 2,-0.6 -2,-0.3 -21,-0.1 0.410 100.3 80.8 -78.9 3.4 -18.9 5.1 4.5 69 69 A D > - 0 0 96 1,-0.2 4,-3.9 -21,-0.2 5,-0.3 -0.857 65.2-164.4-117.0 96.6 -16.2 6.8 2.4 70 70 A M H > S+ 0 0 40 -2,-0.6 4,-2.7 1,-0.3 5,-0.2 0.903 91.7 35.4 -38.6 -70.1 -14.6 4.5 -0.1 71 71 A Y H > S+ 0 0 95 1,-0.2 4,-2.3 2,-0.2 -1,-0.3 0.768 118.2 54.6 -64.1 -22.9 -11.5 6.6 -0.9 72 72 A K H > S+ 0 0 102 -3,-0.2 4,-2.8 2,-0.2 -2,-0.2 0.897 107.2 49.3 -75.7 -38.9 -11.4 7.7 2.7 73 73 A A H X S+ 0 0 0 -4,-3.9 4,-3.3 2,-0.3 -2,-0.2 0.951 116.6 41.9 -61.8 -44.8 -11.4 4.1 3.9 74 74 A I H X S+ 0 0 1 -4,-2.7 4,-3.2 -5,-0.3 5,-0.3 0.907 111.1 57.6 -64.2 -39.1 -8.6 3.6 1.4 75 75 A N H X S+ 0 0 72 -4,-2.3 4,-0.9 -5,-0.2 -2,-0.3 0.873 110.3 43.6 -56.1 -39.9 -7.4 7.0 2.7 76 76 A E H >X S+ 0 0 76 -4,-2.8 4,-2.4 2,-0.2 3,-0.6 0.960 111.2 52.1 -71.4 -54.2 -7.3 5.3 6.1 77 77 A V H 3X S+ 0 0 0 -4,-3.3 4,-3.4 1,-0.3 5,-0.3 0.927 108.6 51.0 -47.3 -53.4 -5.7 2.1 5.0 78 78 A E H 3X S+ 0 0 24 -4,-3.2 4,-3.1 1,-0.3 -1,-0.3 0.857 108.0 54.6 -54.7 -34.2 -2.9 4.0 3.2 79 79 A E H