==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 05-OCT-06 2IMU . COMPND 2 MOLECULE: STRUCTURAL POLYPROTEIN (PP) P1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.GALLOUX,S.LIBERSOU,N.MORELLET,S.BOUAZIZ,M.OULDALI,B.DA . 46 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4548.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 63.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 52.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A F 0 0 239 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 175.8 24.1 9.8 5.4 2 2 A G > + 0 0 31 1,-0.0 4,-3.1 0, 0.0 5,-0.3 -0.700 360.0 48.2 132.6 -83.4 24.4 7.7 2.2 3 3 A F H > S+ 0 0 176 -2,-0.4 4,-3.3 1,-0.2 5,-0.3 0.978 115.2 46.2 -56.8 -56.6 23.2 4.1 2.8 4 4 A K H > S+ 0 0 155 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.815 113.5 52.9 -57.9 -25.5 20.0 5.1 4.5 5 5 A D H > S+ 0 0 54 2,-0.2 4,-2.2 1,-0.1 -1,-0.2 0.933 110.5 44.2 -77.0 -42.9 19.6 7.6 1.6 6 6 A I H X S+ 0 0 104 -4,-3.1 4,-3.1 2,-0.2 5,-0.3 0.946 111.8 54.2 -65.6 -43.1 20.0 5.0 -1.1 7 7 A I H X S+ 0 0 97 -4,-3.3 4,-3.4 -5,-0.3 5,-0.2 0.932 106.4 52.7 -56.5 -42.0 17.7 2.7 0.9 8 8 A R H X S+ 0 0 135 -4,-1.7 4,-1.5 -5,-0.3 -1,-0.2 0.952 109.6 48.4 -59.7 -45.3 15.1 5.5 0.9 9 9 A A H X S+ 0 0 57 -4,-2.2 4,-2.8 1,-0.2 3,-0.5 0.951 113.1 47.3 -60.4 -45.4 15.4 5.8 -2.9 10 10 A I H X S+ 0 0 92 -4,-3.1 4,-3.1 1,-0.3 -2,-0.2 0.934 109.3 53.7 -62.6 -41.5 15.1 2.0 -3.2 11 11 A R H < S+ 0 0 150 -4,-3.4 -1,-0.3 -5,-0.3 -2,-0.2 0.796 115.2 42.0 -63.8 -23.7 12.1 2.1 -0.9 12 12 A R H < S+ 0 0 174 -4,-1.5 -2,-0.2 -3,-0.5 -1,-0.2 0.774 117.9 43.6 -93.6 -29.0 10.6 4.7 -3.3 13 13 A I H < S+ 0 0 113 -4,-2.8 4,-0.4 -5,-0.2 -2,-0.2 0.826 116.2 47.8 -84.4 -30.4 11.6 3.0 -6.5 14 14 A A S X S+ 0 0 19 -4,-3.1 4,-3.8 -5,-0.3 5,-0.3 0.421 78.7 106.7 -88.6 4.5 10.5 -0.4 -5.3 15 15 A V H > S+ 0 0 51 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.934 88.1 38.8 -47.9 -49.3 7.2 0.9 -4.0 16 16 A P H > S+ 0 0 77 0, 0.0 4,-1.5 0, 0.0 -1,-0.2 0.896 116.0 51.8 -70.2 -38.3 5.4 -0.8 -7.0 17 17 A V H > S+ 0 0 77 -4,-0.4 4,-2.9 2,-0.2 5,-0.4 0.951 110.0 49.6 -63.8 -44.5 7.7 -3.9 -6.8 18 18 A V H X S+ 0 0 44 -4,-3.8 4,-3.3 1,-0.2 7,-0.2 0.961 109.3 50.7 -59.6 -50.3 7.0 -4.3 -3.1 19 19 A S H < S+ 0 0 54 -4,-2.1 -1,-0.2 -5,-0.3 -2,-0.2 0.818 119.1 38.8 -59.5 -27.5 3.2 -4.1 -3.6 20 20 A T H < S+ 0 0 115 -4,-1.5 -1,-0.2 -3,-0.2 -2,-0.2 0.755 122.1 40.5 -95.0 -25.7 3.5 -6.7 -6.3 21 21 A L H < S+ 0 0 113 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.2 0.802 105.4 69.0 -91.7 -30.2 6.1 -9.0 -4.7 22 22 A F < - 0 0 115 -4,-3.3 3,-0.3 -5,-0.4 -1,-0.1 -0.789 66.7-162.2 -93.3 110.0 4.7 -8.8 -1.2 23 23 A P S S+ 0 0 104 0, 0.0 3,-0.2 0, 0.0 -1,-0.2 0.770 90.2 50.0 -60.6 -28.8 1.4 -10.6 -1.1 24 24 A P S > S+ 0 0 69 0, 0.0 2,-2.0 0, 0.0 4,-0.9 0.814 96.7 70.4 -82.0 -29.5 0.4 -8.9 2.2 25 25 A A T 4 S+ 0 0 46 -3,-0.3 -3,-0.2 -7,-0.2 -4,-0.1 -0.352 106.8 32.9 -83.7 62.7 1.2 -5.4 1.0 26 26 A A T > S+ 0 0 44 -2,-2.0 4,-1.3 -3,-0.2 -1,-0.1 0.084 109.0 51.4-171.4 -61.6 -1.7 -5.2 -1.4 27 27 A P H > S+ 0 0 67 0, 0.0 4,-1.7 0, 0.0 5,-0.2 0.813 105.7 60.8 -66.8 -28.4 -4.9 -7.1 -0.4 28 28 A L H X S+ 0 0 108 -4,-0.9 4,-1.5 1,-0.2 3,-0.3 0.959 100.0 53.5 -65.4 -44.1 -4.8 -5.3 3.0 29 29 A A H > S+ 0 0 62 -5,-0.3 4,-3.4 1,-0.2 5,-0.4 0.911 102.9 61.3 -55.3 -36.2 -5.2 -2.0 1.3 30 30 A H H X>S+ 0 0 109 -4,-1.3 4,-3.6 1,-0.3 5,-1.7 0.954 101.0 50.4 -54.7 -50.5 -8.2 -3.5 -0.4 31 31 A A H <>S+ 0 0 61 -4,-1.7 5,-0.7 -3,-0.3 -1,-0.3 0.836 117.0 41.8 -60.0 -29.1 -9.8 -4.0 3.0 32 32 A I H <5S+ 0 0 117 -4,-1.5 -2,-0.2 -3,-0.3 -1,-0.2 0.809 120.4 40.9 -88.7 -30.5 -9.1 -0.4 3.8 33 33 A G H <5S+ 0 0 57 -4,-3.4 4,-0.2 -5,-0.2 -2,-0.2 0.862 139.5 10.3 -85.0 -36.2 -10.1 1.0 0.3 34 34 A E T X5S+ 0 0 107 -4,-3.6 4,-3.2 -5,-0.4 5,-0.2 0.705 117.3 69.5-112.8 -31.1 -13.1 -1.2 -0.2 35 35 A G H > S+ 0 0 64 -4,-0.2 4,-4.0 1,-0.2 -1,-0.2 0.943 109.0 55.1 -64.1 -44.1 -17.2 0.9 1.7 38 38 A Y H < S+ 0 0 191 -4,-3.2 4,-0.3 1,-0.2 -1,-0.2 0.899 115.9 38.1 -56.5 -39.1 -18.5 -2.6 2.3 39 39 A L H < S+ 0 0 146 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.818 120.5 45.9 -82.9 -30.3 -19.2 -1.7 5.9 40 40 A L H < S- 0 0 159 -4,-2.8 -2,-0.2 -5,-0.3 -3,-0.2 0.875 129.1 -78.3 -79.7 -37.3 -20.4 1.8 5.1 41 41 A G >< - 0 0 14 -4,-4.0 3,-0.7 -5,-0.3 -2,-0.1 -0.069 23.9-134.1 138.5 117.1 -22.7 0.7 2.2 42 42 A D T 3 S+ 0 0 109 -4,-0.3 -4,-0.1 1,-0.2 3,-0.1 0.177 87.2 94.4 -81.6 24.0 -21.7 -0.1 -1.4 43 43 A E T 3 S- 0 0 128 1,-0.3 -1,-0.2 -6,-0.2 -6,-0.0 0.328 79.2-147.9 -95.3 10.0 -24.6 2.0 -2.7 44 44 A A < - 0 0 83 -3,-0.7 2,-0.5 1,-0.1 -1,-0.3 -0.279 48.7 -43.9 57.9-142.5 -22.2 5.0 -3.1 45 45 A Q 0 0 192 -3,-0.1 -1,-0.1 0, 0.0 -3,-0.0 -0.920 360.0 360.0-126.9 110.2 -24.1 8.3 -2.5 46 46 A A 0 0 168 -2,-0.5 -3,-0.0 0, 0.0 -2,-0.0 -0.867 360.0 360.0-153.8 360.0 -27.6 8.8 -4.0