==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING/INHIBITOR 09-JAN-13 4IPH . COMPND 2 MOLECULE: REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.D.FELDKAMP,A.O.FRANK,B.VANGAMUDI,S.W.FESIK,W.J.CHAZIN . 123 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7062.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 81 65.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 7 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 33 26.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 7.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -2 A G 0 0 91 0, 0.0 6,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-109.1 0.5 3.5 -9.4 2 -1 A S + 0 0 123 1,-0.1 4,-0.1 2,-0.1 0, 0.0 -0.015 360.0 37.9 -56.5 158.0 -2.3 0.9 -8.8 3 0 A H S > S- 0 0 126 1,-0.1 3,-1.9 2,-0.1 4,-0.1 0.993 77.0-170.6 58.5 62.3 -2.4 -1.1 -5.6 4 1 A M G > S+ 0 0 88 1,-0.3 3,-1.8 2,-0.2 4,-0.2 0.751 74.8 66.4 -58.9 -29.0 -1.2 2.0 -3.7 5 2 A V G > S+ 0 0 28 1,-0.3 3,-1.6 2,-0.2 5,-0.3 0.722 85.5 73.4 -70.9 -18.1 -0.5 0.2 -0.5 6 3 A G G < S+ 0 0 41 -3,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.551 83.2 70.4 -69.6 -8.3 2.3 -1.7 -2.3 7 4 A Q G < S+ 0 0 50 -3,-1.8 2,-0.3 -4,-0.1 -1,-0.3 0.651 93.6 69.9 -77.4 -18.1 4.2 1.5 -2.1 8 5 A L S < S- 0 0 9 -3,-1.6 2,-2.5 -4,-0.2 20,-0.2 -0.747 92.3-108.9-110.9 151.6 4.6 1.1 1.7 9 6 A S > - 0 0 42 18,-2.7 3,-2.6 -2,-0.3 4,-0.3 -0.402 41.0-158.2 -74.5 70.2 6.6 -1.3 3.8 10 7 A R T 3 S+ 0 0 126 -2,-2.5 42,-0.1 -5,-0.3 18,-0.0 -0.293 76.7 23.6 -53.0 123.5 3.6 -3.3 5.1 11 8 A G T 3> S+ 0 0 29 43,-0.1 4,-1.8 40,-0.0 -1,-0.3 0.212 88.7 110.9 104.4 -13.1 4.6 -5.0 8.3 12 9 A A H <> S+ 0 0 8 -3,-2.6 4,-2.3 39,-0.2 5,-0.2 0.852 72.4 55.5 -63.3 -37.8 7.4 -2.6 9.2 13 10 A I H > S+ 0 0 0 -4,-0.3 4,-2.3 1,-0.2 5,-0.2 0.955 109.8 45.6 -63.1 -46.9 5.7 -1.1 12.2 14 11 A A H >>S+ 0 0 16 1,-0.2 4,-3.9 2,-0.2 5,-0.6 0.870 111.7 53.1 -63.1 -38.5 5.1 -4.4 13.9 15 12 A A H X>S+ 0 0 12 -4,-1.8 6,-1.6 2,-0.2 5,-1.4 0.901 109.9 47.5 -63.0 -42.6 8.7 -5.5 13.2 16 13 A I H <5S+ 0 0 4 -4,-2.3 -2,-0.2 4,-0.2 -1,-0.2 0.919 123.7 33.9 -63.6 -42.5 10.1 -2.3 14.8 17 14 A M H <5S+ 0 0 15 -4,-2.3 -2,-0.2 -5,-0.2 -3,-0.2 0.931 126.4 35.0 -83.7 -49.0 7.8 -2.8 17.8 18 15 A Q H <5S+ 0 0 137 -4,-3.9 -3,-0.2 -5,-0.2 -2,-0.1 0.939 136.0 19.3 -69.9 -47.8 7.6 -6.6 18.2 19 16 A K T < - 0 0 48 1,-0.2 2,-0.9 3,-0.2 3,-0.7 0.368 30.0-147.8-127.1 2.7 8.7 22.1 24.8 39 36 A G T 3 S+ 0 0 63 1,-0.2 -1,-0.2 2,-0.0 0, 0.0 -0.518 80.9 0.6 71.5-102.7 8.7 25.3 26.9 40 37 A N T 3 S+ 0 0 173 -2,-0.9 -1,-0.2 2,-0.1 0, 0.0 0.099 113.9 93.1-110.9 20.2 12.1 27.0 26.2 41 38 A S S < S- 0 0 76 -3,-0.7 -3,-0.2 1,-0.1 3,-0.1 -0.733 87.6 -83.1-111.0 158.9 13.5 24.5 23.8 42 39 A P - 0 0 82 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.231 67.1 -80.5 -54.2 152.1 13.5 24.3 20.0 43 40 A P - 0 0 49 0, 0.0 2,-0.4 0, 0.0 23,-0.1 -0.173 42.4-152.6 -57.8 147.6 10.2 22.8 18.6 44 41 A R E -B 36 0A 74 -8,-0.7 -8,-1.9 -3,-0.1 2,-0.4 -0.965 6.0-147.9-116.8 144.0 9.7 19.0 18.6 45 42 A Y E -B 35 0A 26 16,-0.4 16,-2.4 -2,-0.4 2,-0.4 -0.940 4.1-159.8-115.4 130.6 7.5 17.2 16.1 46 43 A R E -BC 34 60A 75 -12,-2.7 -12,-2.2 -2,-0.4 2,-0.4 -0.895 16.3-153.7-102.3 135.6 5.5 14.0 16.8 47 44 A L E -BC 33 59A 0 12,-3.0 12,-1.3 -2,-0.4 2,-0.7 -0.931 16.3-151.9-118.2 135.8 4.4 12.0 13.7 48 45 A L E -B 32 0A 45 -16,-2.6 -17,-2.7 -2,-0.4 -16,-1.6 -0.925 34.8-178.1 -93.8 116.0 1.6 9.7 13.1 49 46 A M E -BC 30 56A 0 7,-2.2 7,-2.0 -2,-0.7 2,-0.4 -0.810 17.2-149.2-121.0 162.7 2.9 7.4 10.4 50 47 A S E -BC 29 55A 0 -21,-2.3 -21,-2.5 -2,-0.3 5,-0.2 -0.971 17.0-169.7-132.3 140.7 1.5 4.5 8.4 51 48 A D - 0 0 0 3,-2.3 -39,-0.2 -2,-0.4 4,-0.1 0.224 63.2 -98.6-107.7 13.0 3.1 1.4 6.8 52 49 A G S S+ 0 0 7 2,-0.4 65,-0.5 63,-0.1 3,-0.1 -0.070 120.0 49.1 96.6 -34.7 -0.1 0.5 5.0 53 50 A L S S+ 0 0 89 1,-0.3 66,-2.3 65,-0.1 2,-0.3 0.827 118.4 17.7 -99.2 -49.4 -1.2 -2.1 7.6 54 51 A N E - d 0 119A 30 64,-0.3 -3,-2.3 67,-0.0 -2,-0.4 -0.863 60.5-143.7-121.9 154.7 -0.8 -0.2 10.8 55 52 A T E -Cd 50 120A 18 64,-1.6 66,-2.4 -2,-0.3 2,-0.3 -0.846 15.2-166.0-105.3 157.7 -0.5 3.4 12.0 56 53 A L E -C 49 0A 13 -7,-2.0 -7,-2.2 -2,-0.3 3,-0.3 -0.976 11.5-164.5-145.1 133.8 1.7 4.4 15.0 57 54 A S E S+ 0 0 49 -2,-0.3 -1,-0.0 -9,-0.2 -7,-0.0 0.405 71.0 80.5-100.9 0.0 1.6 7.7 16.8 58 55 A S E + 0 0 21 -12,-0.1 39,-2.2 -9,-0.1 2,-0.4 0.018 54.6 124.9-106.1 30.2 4.9 7.6 18.7 59 56 A F E -Ce 47 97A 1 -12,-1.3 -12,-3.0 -3,-0.3 2,-0.4 -0.734 40.9-163.5 -81.5 135.4 7.4 8.7 16.1 60 57 A M E -Ce 46 98A 30 37,-2.9 39,-2.6 -2,-0.4 2,-0.3 -0.984 14.5-131.9-120.5 129.7 9.5 11.7 17.1 61 58 A L E - e 0 99A 0 -16,-2.4 -16,-0.4 -2,-0.4 2,-0.2 -0.630 25.2-116.8 -78.3 133.0 11.5 13.7 14.6 62 59 A A > - 0 0 9 37,-2.3 3,-2.5 -2,-0.3 4,-0.2 -0.503 27.4-120.7 -62.9 140.2 15.2 14.4 15.5 63 60 A T G > S+ 0 0 61 1,-0.3 3,-1.7 2,-0.2 -1,-0.1 0.770 110.6 68.9 -61.7 -25.6 15.5 18.2 15.8 64 61 A Q G 3 S+ 0 0 116 1,-0.3 -1,-0.3 2,-0.1 36,-0.1 0.710 98.6 53.0 -63.9 -18.1 18.1 18.2 13.1 65 62 A L G X> S+ 0 0 24 -3,-2.5 3,-1.6 34,-0.2 4,-0.6 0.437 76.8 105.0 -96.6 -0.9 15.3 17.3 10.7 66 63 A N H X> + 0 0 11 -3,-1.7 4,-2.4 1,-0.3 3,-1.4 0.836 68.6 65.0 -45.8 -41.0 13.1 20.2 11.8 67 64 A P H 3> S+ 0 0 60 0, 0.0 4,-2.6 0, 0.0 6,-0.3 0.809 92.4 62.6 -60.9 -26.6 13.7 22.2 8.6 68 65 A L H <4>S+ 0 0 49 -3,-1.6 6,-2.9 2,-0.2 5,-1.4 0.819 111.0 39.3 -61.4 -32.3 12.0 19.5 6.5 69 66 A V H X<5S+ 0 0 23 -3,-1.4 3,-1.4 -4,-0.6 -1,-0.2 0.910 115.6 49.8 -83.6 -47.0 8.8 20.3 8.4 70 67 A E H 3<5S+ 0 0 100 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.1 0.827 114.8 44.4 -65.4 -30.4 9.2 24.0 8.6 71 68 A E T 3<5S- 0 0 133 -4,-2.6 -1,-0.3 -5,-0.2 -2,-0.2 0.307 114.9-119.2 -97.5 9.3 9.9 24.3 4.9 72 69 A E T < 5S+ 0 0 147 -3,-1.4 -3,-0.2 2,-0.2 -4,-0.1 0.568 80.7 118.5 73.7 15.2 7.0 21.9 4.1 73 70 A Q S - 0 0 35 -2,-0.8 3,-2.1 -3,-0.1 -45,-0.3 -0.944 62.5 -51.3-150.3 169.4 4.0 17.1 5.6 76 73 A S T 3 S+ 0 0 53 -2,-0.3 -45,-0.2 1,-0.2 36,-0.1 -0.124 120.1 16.7 -49.7 135.0 0.8 15.0 5.8 77 74 A N T 3 S+ 0 0 41 -47,-4.0 -1,-0.2 1,-0.3 36,-0.2 0.086 89.8 130.1 89.5 -18.4 0.4 12.4 3.0 78 75 A C < - 0 0 0 -3,-2.1 -48,-2.9 -49,-0.1 2,-0.5 -0.323 54.6-132.5 -68.1 152.2 4.1 12.5 1.9 79 76 A V E -AF 29 106A 4 27,-2.3 26,-2.3 -50,-0.2 27,-2.1 -0.934 29.7-179.7-110.3 127.3 5.8 9.1 1.5 80 77 A C E -AF 28 104A 0 -52,-3.1 -52,-2.8 -2,-0.5 2,-0.5 -0.893 26.2-136.5-127.6 154.3 9.3 8.7 3.1 81 78 A Q E -AF 27 103A 43 22,-3.0 22,-2.3 -2,-0.3 2,-0.5 -0.952 22.9-138.7-110.3 124.7 12.0 6.1 3.5 82 79 A I E + F 0 102A 1 -56,-2.8 20,-0.2 -2,-0.5 3,-0.1 -0.722 24.5 174.6 -84.2 125.4 13.5 5.9 7.0 83 80 A H E + 0 0 63 18,-2.4 2,-0.3 -2,-0.5 19,-0.2 0.728 67.8 15.1-104.9 -28.3 17.3 5.5 6.8 84 81 A R E S+ F 0 101A 111 17,-1.7 16,-2.6 2,-0.0 17,-1.7 -0.951 70.0 152.2-148.0 128.6 18.3 5.7 10.5 85 82 A F E - F 0 99A 5 -63,-0.3 2,-0.3 -2,-0.3 14,-0.2 -0.973 23.4-151.4-148.3 161.6 16.1 5.4 13.6 86 83 A I E - F 0 98A 84 12,-1.7 12,-2.9 -2,-0.3 2,-0.5 -0.980 13.6-135.8-133.6 149.5 16.3 4.4 17.2 87 84 A V E - F 0 97A 51 -2,-0.3 2,-0.4 10,-0.2 10,-0.2 -0.884 21.7-169.7-102.3 132.6 13.7 2.9 19.6 88 85 A N E - F 0 96A 87 8,-3.1 8,-2.9 -2,-0.5 2,-0.5 -0.988 11.0-147.0-124.0 140.0 13.6 4.3 23.1 89 86 A T E - F 0 95A 66 -2,-0.4 6,-0.2 6,-0.2 5,-0.1 -0.886 14.5-144.2-107.8 127.5 11.7 3.0 26.1 90 87 A L > - 0 0 68 4,-3.0 3,-2.0 -2,-0.5 -1,-0.0 -0.335 31.2 -99.3 -83.3 170.0 10.2 5.3 28.7 91 88 A K T 3 S+ 0 0 214 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.822 123.5 54.0 -57.1 -36.7 9.9 4.7 32.5 92 89 A D T 3 S- 0 0 105 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.426 122.2-105.3 -84.1 1.6 6.3 3.8 32.1 93 90 A G S < S+ 0 0 48 -3,-2.0 -2,-0.1 1,-0.3 -1,-0.1 0.241 76.3 133.4 97.4 -12.2 7.1 1.2 29.4 94 91 A R - 0 0 163 -5,-0.1 -4,-3.0 1,-0.0 2,-0.4 -0.329 46.3-138.4 -67.5 155.7 5.9 3.1 26.4 95 92 A R E - F 0 89A 118 -6,-0.2 2,-0.4 -3,-0.1 -6,-0.2 -0.939 13.9-164.6-122.2 143.2 8.2 3.1 23.4 96 93 A V E - F 0 88A 27 -8,-2.9 -8,-3.1 -2,-0.4 2,-0.6 -0.949 12.6-143.2-124.5 144.6 9.1 5.9 21.0 97 94 A V E -eF 59 87A 1 -39,-2.2 -37,-2.9 -2,-0.4 2,-0.7 -0.934 13.8-154.6-108.9 119.7 10.7 5.8 17.7 98 95 A I E -eF 60 86A 26 -12,-2.9 -12,-1.7 -2,-0.6 2,-0.6 -0.843 8.5-143.9 -98.9 117.1 13.1 8.6 16.9 99 96 A L E +eF 61 85A 0 -39,-2.6 -37,-2.3 -2,-0.7 -14,-0.2 -0.710 27.0 167.4 -79.6 117.1 13.6 9.3 13.2 100 97 A M E + 0 0 39 -16,-2.6 2,-0.4 -2,-0.6 -15,-0.2 0.839 66.4 13.3-100.5 -44.3 17.3 10.4 12.6 101 98 A E E S+ F 0 84A 100 -17,-1.7 -18,-2.4 2,-0.0 -17,-1.7 -0.999 71.3 158.5-133.9 133.4 17.7 10.2 8.9 102 99 A L E - F 0 82A 21 -2,-0.4 2,-0.4 -20,-0.2 -20,-0.2 -0.984 25.6-145.8-148.9 161.6 14.9 10.0 6.3 103 100 A E E - F 0 81A 90 -22,-2.3 -22,-3.0 -2,-0.3 2,-0.7 -0.997 19.7-129.8-126.3 134.8 14.3 10.8 2.7 104 101 A V E - F 0 80A 48 -2,-0.4 -24,-0.3 -24,-0.2 3,-0.1 -0.737 24.4-178.9 -84.0 116.3 11.0 12.0 1.2 105 102 A L E S+ 0 0 67 -26,-2.3 2,-0.4 -2,-0.7 -25,-0.2 0.838 70.4 14.7 -82.2 -37.6 10.3 9.7 -1.7 106 103 A K E S- F 0 79A 80 -27,-2.1 -27,-2.3 -29,-0.0 -1,-0.3 -0.996 81.5-119.1-142.4 135.0 7.1 11.4 -2.9 107 104 A S > - 0 0 46 -2,-0.4 4,-1.4 -29,-0.2 5,-0.3 -0.268 26.4-113.2 -70.4 158.0 5.6 14.7 -1.9 108 105 A A H > S+ 0 0 11 -35,-0.3 4,-2.6 1,-0.2 3,-0.1 0.838 121.1 51.8 -53.8 -37.4 2.3 15.2 -0.2 109 106 A E H 4 S+ 0 0 153 1,-0.2 -1,-0.2 2,-0.2 -32,-0.0 0.856 108.5 49.7 -71.8 -35.2 1.1 16.9 -3.4 110 107 A A H 4 S+ 0 0 62 -3,-0.2 -1,-0.2 1,-0.1 -2,-0.2 0.660 121.8 33.6 -77.4 -18.0 2.2 13.9 -5.6 111 108 A V H < S+ 0 0 21 -4,-1.4 -2,-0.2 -3,-0.1 -3,-0.2 0.826 79.9 178.1-101.9 -54.2 0.5 11.4 -3.3 112 109 A G < + 0 0 42 -4,-2.6 2,-0.3 -5,-0.3 -3,-0.1 0.210 51.4 50.8 81.8 -16.1 -2.5 13.4 -2.3 113 110 A V S S- 0 0 70 -36,-0.2 2,-0.4 -5,-0.0 -1,-0.0 -0.961 89.9 -89.0-147.8 162.7 -4.4 10.9 -0.1 114 111 A K - 0 0 108 -2,-0.3 2,-0.4 1,-0.1 -83,-0.1 -0.638 51.1-124.6 -72.4 130.8 -4.0 8.5 2.8 115 112 A I - 0 0 0 -2,-0.4 -63,-0.1 -111,-0.1 -86,-0.1 -0.673 60.2 -32.1 -84.7 129.0 -2.9 5.2 1.3 116 113 A G S S- 0 0 34 -2,-0.4 -63,-0.1 1,-0.2 -2,-0.0 -0.175 88.1 -69.5 67.0-157.6 -5.0 2.1 2.2 117 114 A N - 0 0 147 -65,-0.5 -1,-0.2 2,-0.0 -2,-0.0 -0.517 56.2-177.4-133.6 69.7 -6.8 1.7 5.5 118 115 A P - 0 0 14 0, 0.0 -64,-0.3 0, 0.0 -65,-0.1 -0.283 14.5-142.3 -67.8 153.6 -4.2 1.1 8.2 119 116 A V E -d 54 0A 84 -66,-2.3 -64,-1.6 -64,-0.0 -2,-0.0 -0.874 29.8 -86.8-119.1 150.2 -5.4 0.5 11.8 120 117 A P E -d 55 0A 92 0, 0.0 2,-0.4 0, 0.0 -64,-0.2 -0.283 39.9-127.5 -59.1 132.9 -3.8 1.7 15.0 121 118 A Y - 0 0 40 -66,-2.4 2,-0.8 1,-0.0 -64,-0.2 -0.682 18.3-139.8 -78.2 132.8 -1.0 -0.5 16.3 122 119 A N 0 0 141 -2,-0.4 -66,-0.0 1,-0.2 -1,-0.0 -0.869 360.0 360.0-102.6 106.9 -1.6 -1.5 19.9 123 120 A E 0 0 189 -2,-0.8 -1,-0.2 -28,-0.1 -2,-0.0 0.660 360.0 360.0 89.2 360.0 1.6 -1.4 22.0