==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 08-MAR-02 1IUY . COMPND 2 MOLECULE: CULLIN-3 HOMOLOGUE; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8298.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 54.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 8.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 35.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 255 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.1 -35.0 -49.8 -48.1 2 2 A A - 0 0 85 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.985 360.0-179.2-141.5 127.9 -34.8 -49.8 -44.3 3 3 A A + 0 0 96 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 0.947 22.2 166.3 -86.2 -67.3 -35.0 -46.9 -41.9 4 4 A K - 0 0 186 2,-0.0 2,-0.1 0, 0.0 -2,-0.0 0.399 29.5-117.3 61.7 153.4 -34.5 -48.3 -38.4 5 5 A Q - 0 0 192 1,-0.1 2,-0.2 2,-0.0 0, 0.0 -0.376 24.0-163.6-110.7-169.5 -33.9 -46.2 -35.4 6 6 A G - 0 0 70 -2,-0.1 2,-0.4 2,-0.0 -1,-0.1 -0.628 34.6 -74.5-150.2-151.1 -31.0 -45.9 -32.9 7 7 A E + 0 0 192 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.761 51.2 167.2-129.3 86.3 -30.0 -44.6 -29.5 8 8 A S + 0 0 99 -2,-0.4 3,-0.1 1,-0.1 -2,-0.0 -0.697 24.9 109.4 -99.7 152.2 -29.6 -40.8 -29.4 9 9 A D + 0 0 154 1,-0.4 2,-0.3 -2,-0.3 -1,-0.1 -0.039 52.6 82.7-178.7 -61.5 -29.3 -38.6 -26.4 10 10 A P + 0 0 117 0, 0.0 -1,-0.4 0, 0.0 0, 0.0 -0.521 41.6 127.3 -71.2 125.1 -25.8 -37.0 -25.8 11 11 A E + 0 0 148 -2,-0.3 -3,-0.0 -3,-0.1 0, 0.0 0.054 20.4 124.3-169.5 38.0 -25.3 -33.9 -27.9 12 12 A R - 0 0 211 2,-0.1 0, 0.0 1,-0.0 0, 0.0 0.893 49.0-158.0 -72.5 -41.3 -24.1 -31.1 -25.6 13 13 A K + 0 0 180 1,-0.2 2,-0.2 2,-0.0 -1,-0.0 0.940 33.6 155.9 61.1 49.4 -20.9 -30.4 -27.5 14 14 A E + 0 0 106 1,-0.1 -1,-0.2 2,-0.0 -2,-0.1 -0.626 25.3 166.2-104.3 164.6 -19.2 -28.8 -24.6 15 15 A T - 0 0 115 -2,-0.2 -1,-0.1 3,-0.0 -2,-0.0 0.474 17.8-162.0-139.3 -57.6 -15.5 -28.4 -23.8 16 16 A R + 0 0 176 2,-0.1 3,-0.1 1,-0.0 -2,-0.0 0.997 35.5 141.3 60.3 76.2 -14.9 -25.9 -21.0 17 17 A Q S S+ 0 0 161 1,-0.1 2,-0.2 2,-0.0 -1,-0.0 0.703 73.4 14.5-113.2 -37.8 -11.2 -25.1 -21.5 18 18 A K + 0 0 185 1,-0.1 -1,-0.1 3,-0.0 -2,-0.1 -0.723 64.9 149.1-145.5 90.7 -11.0 -21.3 -20.7 19 19 A V S S+ 0 0 105 -2,-0.2 2,-0.2 1,-0.2 -1,-0.1 0.955 70.3 1.8 -84.3 -64.6 -14.0 -19.8 -19.0 20 20 A D - 0 0 138 1,-0.0 -1,-0.2 0, 0.0 2,-0.2 -0.655 66.2-140.1-119.2 176.3 -12.5 -16.9 -16.9 21 21 A D + 0 0 95 -2,-0.2 -1,-0.0 1,-0.1 -3,-0.0 -0.616 27.9 158.0-126.2-174.2 -9.1 -15.4 -16.4 22 22 A D >> + 0 0 91 -2,-0.2 4,-3.3 3,-0.0 3,-2.1 0.146 65.9 78.2-177.7 -39.1 -7.0 -14.0 -13.6 23 23 A R T 34 S+ 0 0 160 1,-0.3 4,-0.5 2,-0.2 35,-0.0 0.868 104.0 42.8 -56.4 -38.3 -3.3 -14.2 -14.5 24 24 A K T 34 S+ 0 0 83 1,-0.1 -1,-0.3 2,-0.1 -3,-0.0 -0.039 121.2 42.9 -98.4 30.2 -3.8 -11.1 -16.7 25 25 A H T X> S+ 0 0 103 -3,-2.1 4,-2.1 3,-0.1 3,-0.7 0.519 95.6 66.8-137.5 -44.1 -5.9 -9.4 -14.1 26 26 A E H 3X S+ 0 0 50 -4,-3.3 4,-1.2 1,-0.3 -3,-0.1 0.830 105.3 50.1 -54.0 -33.7 -4.3 -9.9 -10.6 27 27 A I H 3> S+ 0 0 3 -4,-0.5 4,-1.4 -5,-0.3 -1,-0.3 0.792 106.5 55.2 -75.9 -28.9 -1.4 -7.7 -11.9 28 28 A E H <> S+ 0 0 59 -3,-0.7 4,-1.2 1,-0.2 -2,-0.2 0.889 107.5 48.3 -70.6 -40.3 -3.8 -5.0 -13.0 29 29 A A H X S+ 0 0 39 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.827 107.1 57.6 -69.2 -32.2 -5.4 -4.7 -9.6 30 30 A A H X S+ 0 0 13 -4,-1.2 4,-2.0 -5,-0.3 -1,-0.2 0.893 104.5 50.5 -65.3 -40.8 -2.0 -4.5 -8.0 31 31 A I H X S+ 0 0 0 -4,-1.4 4,-2.2 1,-0.2 -1,-0.2 0.835 111.1 49.7 -66.4 -33.0 -1.0 -1.5 -10.0 32 32 A V H X S+ 0 0 35 -4,-1.2 4,-1.3 2,-0.2 -2,-0.2 0.883 109.1 50.8 -73.1 -40.1 -4.3 0.3 -9.1 33 33 A R H X S+ 0 0 186 -4,-2.1 4,-0.9 2,-0.2 -2,-0.2 0.891 115.6 42.3 -64.7 -40.8 -3.9 -0.4 -5.4 34 34 A I H >X>S+ 0 0 9 -4,-2.0 4,-4.0 2,-0.2 3,-0.6 0.929 113.4 50.3 -72.1 -47.2 -0.3 1.0 -5.4 35 35 A M H 3X5S+ 0 0 0 -4,-2.2 4,-0.9 1,-0.2 55,-0.2 0.747 107.6 57.4 -63.2 -23.4 -1.1 4.0 -7.6 36 36 A K H 3<5S+ 0 0 140 -4,-1.3 -1,-0.2 2,-0.2 -2,-0.2 0.811 119.4 28.1 -77.1 -31.5 -4.0 4.8 -5.3 37 37 A S H <<5S+ 0 0 100 -4,-0.9 -2,-0.2 -3,-0.6 -3,-0.1 0.771 131.8 36.8 -97.9 -34.3 -1.8 5.0 -2.2 38 38 A R H <5S- 0 0 126 -4,-4.0 2,-3.2 1,-0.2 -3,-0.2 0.774 78.0-175.3 -87.9 -30.2 1.4 6.1 -3.9 39 39 A K << + 0 0 128 -4,-0.9 51,-2.9 -5,-0.5 2,-0.5 -0.343 69.1 45.6 68.5 -67.9 -0.3 8.3 -6.5 40 40 A K E S+A 89 0A 126 -2,-3.2 2,-0.3 49,-0.2 49,-0.2 -0.922 70.5 149.1-111.8 129.8 3.0 9.1 -8.2 41 41 A M E -A 88 0A 20 47,-1.1 47,-2.1 -2,-0.5 -2,-0.0 -0.982 39.8-113.5-157.9 145.3 5.5 6.4 -9.1 42 42 A Q E > -A 87 0A 95 -2,-0.3 4,-1.4 45,-0.2 45,-0.2 -0.069 33.5-108.5 -70.4 176.5 8.1 5.6 -11.7 43 43 A H H > S+ 0 0 30 43,-0.6 4,-2.6 2,-0.2 5,-0.2 0.975 116.6 40.4 -72.0 -58.1 7.9 2.8 -14.2 44 44 A N H > S+ 0 0 113 1,-0.2 4,-3.7 2,-0.2 5,-0.3 0.918 116.3 51.5 -57.2 -46.4 10.7 0.6 -12.8 45 45 A V H > S+ 0 0 59 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.887 112.1 46.8 -58.8 -40.5 9.6 1.3 -9.2 46 46 A L H X S+ 0 0 0 -4,-1.4 4,-2.3 2,-0.2 -1,-0.2 0.880 116.5 44.3 -69.4 -39.1 6.0 0.4 -10.2 47 47 A V H X S+ 0 0 13 -4,-2.6 4,-3.4 2,-0.2 5,-0.3 0.935 112.2 50.4 -70.9 -48.2 7.1 -2.8 -11.9 48 48 A A H X S+ 0 0 39 -4,-3.7 4,-0.9 1,-0.2 -1,-0.2 0.828 114.5 47.0 -59.2 -32.9 9.6 -3.9 -9.2 49 49 A E H X S+ 0 0 55 -4,-1.5 4,-2.0 -5,-0.3 -2,-0.2 0.954 117.1 39.3 -74.2 -52.9 6.8 -3.4 -6.7 50 50 A V H X S+ 0 0 0 -4,-2.3 4,-1.4 1,-0.2 -2,-0.2 0.892 115.0 53.7 -64.5 -41.1 4.0 -5.2 -8.5 51 51 A T H < S+ 0 0 33 -4,-3.4 -1,-0.2 1,-0.2 -2,-0.2 0.801 115.8 40.3 -64.1 -29.2 6.4 -7.9 -9.7 52 52 A Q H >< S+ 0 0 129 -4,-0.9 3,-0.7 -5,-0.3 -1,-0.2 0.719 110.6 57.5 -90.6 -25.3 7.5 -8.5 -6.1 53 53 A Q H 3< S+ 0 0 91 -4,-2.0 3,-0.2 1,-0.2 -2,-0.2 0.697 108.0 48.7 -77.6 -20.1 4.0 -8.2 -4.7 54 54 A L T 3< S+ 0 0 22 -4,-1.4 4,-0.4 -5,-0.2 -1,-0.2 -0.340 82.0 95.5-116.0 50.5 2.7 -11.0 -6.9 55 55 A K < + 0 0 116 -3,-0.7 -1,-0.1 4,-0.1 -2,-0.1 0.664 64.8 74.4-108.0 -26.5 5.4 -13.6 -6.2 56 56 A A S S+ 0 0 109 -3,-0.2 -2,-0.1 -4,-0.2 3,-0.1 0.829 113.9 25.4 -56.5 -33.1 3.7 -15.6 -3.5 57 57 A R S S- 0 0 195 1,-0.3 2,-0.2 0, 0.0 -2,-0.1 0.897 132.9 -18.3 -94.2 -71.1 1.4 -17.1 -6.2 58 58 A F - 0 0 53 -4,-0.4 -1,-0.3 -35,-0.0 0, 0.0 -0.718 66.7 -97.2-130.8-179.0 3.3 -17.0 -9.5 59 59 A L - 0 0 166 -2,-0.2 -4,-0.1 -3,-0.1 -7,-0.1 -0.745 43.2-166.6-106.4 84.6 6.2 -15.2 -11.2 60 60 A P - 0 0 11 0, 0.0 -6,-0.1 0, 0.0 -37,-0.0 -0.344 8.9-140.3 -70.0 150.0 4.7 -12.3 -13.1 61 61 A S >> - 0 0 66 1,-0.1 4,-1.1 -2,-0.0 3,-0.7 -0.878 19.9-120.6-114.6 145.9 6.8 -10.4 -15.7 62 62 A P H 3> S+ 0 0 42 0, 0.0 4,-3.9 0, 0.0 5,-0.3 0.764 103.4 80.0 -51.5 -26.8 6.9 -6.6 -16.4 63 63 A V H 3> S+ 0 0 90 1,-0.2 4,-1.8 2,-0.2 5,-0.2 0.945 98.4 35.4 -45.3 -66.4 5.9 -7.5 -20.0 64 64 A V H <> S+ 0 0 37 -3,-0.7 4,-2.8 1,-0.2 -1,-0.2 0.822 117.6 57.1 -59.9 -31.3 2.2 -8.0 -19.2 65 65 A I H X S+ 0 0 0 -4,-1.1 4,-2.8 2,-0.2 5,-0.3 0.936 104.3 49.4 -65.7 -48.0 2.5 -5.1 -16.6 66 66 A K H X S+ 0 0 113 -4,-3.9 4,-1.4 1,-0.2 -1,-0.2 0.873 116.6 43.4 -59.4 -38.3 3.8 -2.6 -19.2 67 67 A K H X S+ 0 0 137 -4,-1.8 4,-1.1 -5,-0.3 -2,-0.2 0.893 112.3 52.2 -74.4 -41.7 0.9 -3.6 -21.5 68 68 A R H >X S+ 0 0 65 -4,-2.8 4,-1.4 1,-0.2 3,-0.5 0.921 112.2 45.4 -60.5 -45.7 -1.7 -3.6 -18.7 69 69 A I H 3X S+ 0 0 0 -4,-2.8 4,-2.1 1,-0.2 9,-0.2 0.858 103.9 63.9 -66.6 -35.7 -0.6 -0.1 -17.6 70 70 A E H 3X S+ 0 0 115 -4,-1.4 4,-0.9 -5,-0.3 -1,-0.2 0.821 105.7 46.2 -57.9 -31.2 -0.6 1.1 -21.2 71 71 A G H S+ 0 0 6 -4,-1.4 5,-3.2 1,-0.2 3,-0.4 0.920 103.1 53.8 -61.2 -45.2 -5.1 2.1 -17.9 73 73 A I H ><5S+ 0 0 36 -4,-2.1 3,-1.0 1,-0.3 -1,-0.2 0.889 111.6 45.3 -56.7 -40.7 -3.6 5.4 -19.1 74 74 A E H 3<5S+ 0 0 161 -4,-0.9 -1,-0.3 1,-0.2 -2,-0.2 0.716 108.1 58.6 -75.5 -21.6 -5.9 5.3 -22.1 75 75 A R T 3<5S- 0 0 175 -4,-1.3 -1,-0.2 -3,-0.4 -2,-0.2 0.182 121.5-106.1 -92.7 16.8 -8.8 4.3 -19.8 76 76 A E T < 5S+ 0 0 152 -3,-1.0 -3,-0.2 2,-0.2 -2,-0.1 0.797 95.8 109.0 64.2 28.8 -8.4 7.5 -17.8 77 77 A Y S