==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 06-OCT-96 1IUZ . COMPND 2 MOLECULE: PLASTOCYANIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ULVA PERTUSA; . AUTHOR N.SHIBATA . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4969.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 67.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 80 0, 0.0 2,-0.5 0, 0.0 27,-0.2 0.000 360.0 360.0 360.0 136.2 24.7 -0.2 21.3 2 1 A Q E -a 28 0A 59 25,-2.5 27,-2.9 2,-0.0 2,-0.4 -0.992 360.0-147.9-114.8 125.9 27.3 -2.8 22.5 3 2 A I E -a 29 0A 88 -2,-0.5 2,-0.5 25,-0.2 27,-0.2 -0.841 12.3-171.3 -94.1 134.6 27.7 -3.1 26.3 4 3 A V E -a 30 0A 0 25,-3.0 27,-2.7 -2,-0.4 2,-0.3 -0.991 14.6-144.3-123.9 119.5 31.2 -4.0 27.5 5 4 A K E -aB 31 16A 64 11,-2.9 11,-2.5 -2,-0.5 2,-0.9 -0.714 8.6-136.8 -85.4 141.3 31.5 -4.8 31.2 6 5 A L E S+aB 32 15A 0 25,-2.8 28,-2.2 -2,-0.3 27,-2.1 -0.891 83.7 9.5-100.2 100.4 34.7 -3.8 33.0 7 6 A G S S- 0 0 0 7,-2.9 6,-0.2 -2,-0.9 2,-0.2 0.337 91.5 -99.7 99.8 132.6 35.5 -6.8 35.1 8 7 A G > - 0 0 1 4,-2.6 3,-2.3 1,-0.1 -2,-0.0 -0.540 28.1-118.8 -78.1 152.4 33.7 -10.1 34.9 9 8 A D T 3 S+ 0 0 112 1,-0.3 -1,-0.1 -2,-0.2 26,-0.1 0.870 117.1 59.6 -54.7 -36.0 30.9 -10.9 37.4 10 9 A D T 3 S- 0 0 124 1,-0.1 -1,-0.3 24,-0.1 -2,-0.0 0.333 126.7-100.1 -72.8 -0.6 33.1 -13.8 38.5 11 10 A G S < S+ 0 0 47 -3,-2.3 -2,-0.1 1,-0.3 2,-0.1 0.424 71.5 147.3 94.2 -1.3 36.0 -11.4 39.4 12 11 A S - 0 0 65 1,-0.1 -4,-2.6 -5,-0.0 2,-1.6 -0.475 54.3-124.9 -67.8 143.3 38.2 -11.8 36.2 13 12 A L + 0 0 60 -6,-0.2 2,-0.3 76,-0.1 -1,-0.1 -0.704 69.5 117.5 -89.5 85.9 40.0 -8.7 35.3 14 13 A A S S- 0 0 26 -2,-1.6 -7,-2.9 77,-0.1 2,-0.5 -0.975 72.9-112.6-149.4 154.6 38.7 -8.6 31.8 15 14 A F E -B 6 0A 2 77,-0.4 -9,-0.2 -2,-0.3 77,-0.1 -0.820 48.4-125.2 -79.6 129.8 36.6 -6.6 29.4 16 15 A V E S+B 5 0A 64 -11,-2.5 -11,-2.9 -2,-0.5 2,-0.2 -0.933 100.0 20.8-126.2 110.9 33.5 -8.8 28.9 17 16 A P S S- 0 0 52 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.644 80.3-177.7 -73.0 165.5 33.2 -9.3 25.9 18 17 A S S S+ 0 0 60 1,-0.2 76,-2.3 -2,-0.2 2,-0.4 0.317 71.1 52.8-110.4 2.9 36.8 -8.5 24.9 19 18 A K E +d 94 0B 145 74,-0.2 2,-0.3 2,-0.0 -1,-0.2 -0.938 69.8 155.5-139.4 111.9 36.3 -9.0 21.1 20 19 A I E -d 95 0B 7 74,-1.9 76,-2.3 -2,-0.4 2,-0.4 -0.953 30.6-149.0-134.5 156.0 33.4 -7.0 19.5 21 20 A S E +d 96 0B 68 -2,-0.3 2,-0.3 74,-0.2 76,-0.2 -0.993 25.0 177.2-123.4 133.8 32.5 -5.7 16.0 22 21 A V E -d 97 0B 3 74,-2.9 76,-2.5 -2,-0.4 2,-0.2 -0.937 30.8-108.4-134.9 156.4 30.5 -2.5 15.7 23 22 A A > - 0 0 50 -2,-0.3 3,-2.4 74,-0.2 50,-0.3 -0.499 51.3 -88.6 -73.3 148.9 29.1 -0.3 13.0 24 23 A A T 3 S+ 0 0 48 74,-1.9 50,-0.2 1,-0.3 -1,-0.1 -0.451 119.7 17.1 -55.4 126.7 30.7 3.2 12.6 25 24 A G T 3 S+ 0 0 40 48,-3.0 2,-0.3 1,-0.3 -1,-0.3 0.397 92.5 136.1 88.3 -2.6 28.8 5.5 14.9 26 25 A E < - 0 0 60 -3,-2.4 47,-0.5 47,-0.3 -1,-0.3 -0.614 60.0-110.9 -79.1 135.1 27.3 2.6 16.9 27 26 A A E - C 0 72A 18 -2,-0.3 -25,-2.5 45,-0.1 2,-0.5 -0.387 24.8-162.2 -69.9 136.4 27.5 3.3 20.7 28 27 A I E -aC 2 71A 0 43,-2.3 43,-2.0 -27,-0.2 2,-0.7 -0.988 8.7-158.2-115.9 121.2 29.8 1.2 22.9 29 28 A E E -aC 3 70A 62 -27,-2.9 -25,-3.0 -2,-0.5 2,-0.7 -0.902 1.3-159.2-104.9 110.6 28.8 1.4 26.5 30 29 A F E -aC 4 69A 0 39,-3.0 39,-2.2 -2,-0.7 2,-0.6 -0.848 14.1-165.0 -91.1 111.8 31.7 0.6 28.9 31 30 A V E -aC 5 68A 30 -27,-2.7 -25,-2.8 -2,-0.7 2,-0.4 -0.890 19.1-130.3-109.9 117.8 30.0 -0.3 32.2 32 31 A N E +a 6 0A 1 35,-2.7 34,-3.1 -2,-0.6 -25,-0.1 -0.467 44.6 154.3 -66.9 117.6 32.1 -0.5 35.4 33 32 A N - 0 0 18 -27,-2.1 2,-0.3 -2,-0.4 -26,-0.2 0.820 47.2 -14.3-120.0 -51.8 31.2 -3.8 36.9 34 33 A A S S+ 0 0 22 -28,-2.2 -1,-0.3 -22,-0.1 -24,-0.1 -0.993 106.8 30.6-158.8 154.4 33.7 -5.5 39.2 35 34 A G S S- 0 0 40 -2,-0.3 -28,-0.1 1,-0.2 -1,-0.1 0.720 89.7-168.5 68.2 23.3 37.4 -5.5 40.3 36 35 A F + 0 0 72 -30,-0.1 -1,-0.2 27,-0.1 27,-0.1 -0.325 60.0 94.3 -76.9 164.8 37.6 -1.8 39.8 37 36 A P + 0 0 50 0, 0.0 2,-0.3 0, 0.0 26,-0.2 0.226 64.1 153.0 -64.5 141.8 39.5 0.6 39.6 38 37 A H E -G 62 0C 0 24,-1.3 24,-2.9 -2,-0.1 2,-0.3 -0.899 24.3-167.4-130.3 160.4 39.7 0.3 35.9 39 38 A N E - 0 0 0 -2,-0.3 2,-0.5 22,-0.2 20,-0.2 -0.868 21.3-124.5-139.4 178.1 40.3 2.9 33.1 40 39 A I E +G 58 0C 2 18,-2.5 18,-3.1 -2,-0.3 2,-0.6 -0.918 28.8 177.5-129.7 102.4 39.9 2.6 29.3 41 40 A V E -E 82 0B 8 41,-2.8 41,-2.6 -2,-0.5 2,-0.4 -0.921 20.9-145.8-114.7 120.7 43.0 3.4 27.2 42 41 A F E -E 81 0B 2 -2,-0.6 2,-0.7 11,-0.5 39,-0.3 -0.695 30.0-118.1 -81.1 134.7 43.0 3.2 23.4 43 42 A D > - 0 0 48 37,-2.7 3,-2.5 -2,-0.4 37,-0.4 -0.633 13.1-151.0 -79.4 119.2 46.4 2.1 22.3 44 43 A E T 3 S+ 0 0 134 -2,-0.7 3,-0.4 1,-0.3 -1,-0.2 0.700 98.2 53.6 -63.6 -17.0 48.0 4.6 20.1 45 44 A D T 3 S+ 0 0 148 1,-0.2 -1,-0.3 35,-0.0 -2,-0.1 0.378 111.7 47.2 -93.0 1.1 49.9 1.8 18.2 46 45 A A S < S+ 0 0 35 -3,-2.5 34,-2.7 34,-0.2 -3,-0.3 -0.316 86.6 93.4-140.0 50.5 46.7 -0.0 17.5 47 46 A V S S- 0 0 28 -3,-0.4 32,-0.2 32,-0.2 3,-0.1 -0.954 80.8 -89.8-131.4 158.2 44.2 2.5 16.1 48 47 A P > - 0 0 22 0, 0.0 3,-1.6 0, 0.0 29,-0.1 -0.191 57.2 -81.0 -62.8 159.3 43.5 3.3 12.4 49 48 A A T 3 S+ 0 0 96 1,-0.3 3,-0.1 3,-0.0 26,-0.0 -0.297 117.2 28.0 -61.5 140.2 45.4 6.0 10.7 50 49 A G T 3 S+ 0 0 87 1,-0.2 2,-0.5 -3,-0.1 -1,-0.3 0.524 92.3 121.4 85.7 5.2 44.1 9.5 11.4 51 50 A V < - 0 0 32 -3,-1.6 2,-0.9 -7,-0.1 -1,-0.2 -0.898 57.4-143.1-105.3 129.1 42.7 8.5 14.8 52 51 A D > - 0 0 99 -2,-0.5 4,-1.0 1,-0.2 3,-0.3 -0.783 12.3-166.6 -85.0 108.3 43.8 10.3 18.0 53 52 A A H > S+ 0 0 3 -2,-0.9 4,-0.8 1,-0.2 -11,-0.5 0.862 85.2 56.4 -65.1 -33.2 43.8 7.5 20.6 54 53 A D H >4 S+ 0 0 101 1,-0.2 3,-0.7 2,-0.2 -1,-0.2 0.888 98.2 62.3 -69.0 -34.0 44.1 9.9 23.5 55 54 A A H 34 S+ 0 0 68 -3,-0.3 -1,-0.2 1,-0.2 -2,-0.2 0.868 111.5 36.2 -58.4 -40.8 40.9 11.8 22.4 56 55 A I H 3< S+ 0 0 30 -4,-1.0 -1,-0.2 -3,-0.2 -2,-0.2 0.531 96.8 100.5 -94.4 -4.2 38.7 8.8 22.9 57 56 A S << - 0 0 9 -4,-0.8 2,-0.5 -3,-0.7 -16,-0.2 -0.333 61.4-146.1 -75.5 160.2 40.5 7.2 26.0 58 57 A Y E +G 40 0C 76 -18,-3.1 -18,-2.5 1,-0.1 4,-0.1 -0.896 22.8 175.7-122.9 96.3 39.1 7.7 29.5 59 59 A D E + 0 0 85 -2,-0.5 -1,-0.1 -20,-0.2 2,-0.1 0.724 48.1 90.8 -75.8 -28.3 42.4 7.8 31.6 60 61 A D E S- 0 0 116 1,-0.1 -20,-0.2 -20,-0.1 2,-0.2 -0.416 88.3 -97.1 -69.8 151.6 40.8 8.5 35.0 61 62 A Y E - 0 0 115 -22,-0.1 2,-0.7 -2,-0.1 -22,-0.2 -0.436 23.8-138.2 -68.8 140.5 40.0 5.7 37.2 62 63 A L E +G 38 0C 1 -24,-2.9 -24,-1.3 -2,-0.2 -1,-0.1 -0.907 29.1 173.9 -97.5 113.8 36.4 4.4 37.2 63 64 A N + 0 0 94 -2,-0.7 2,-0.4 -26,-0.2 -1,-0.1 0.561 46.7 60.1-102.0 -15.0 35.8 3.8 40.9 64 65 A S S > S- 0 0 66 -30,-0.0 3,-1.5 0, 0.0 -32,-0.2 -0.936 83.5-103.5-126.4 144.1 32.1 2.9 41.4 65 66 A K T 3 S+ 0 0 147 -2,-0.4 -32,-0.2 1,-0.2 3,-0.1 -0.355 105.9 25.5 -58.4 135.9 29.9 0.1 40.1 66 67 A G T 3 S+ 0 0 44 -34,-3.1 -1,-0.2 1,-0.3 -33,-0.1 0.158 76.6 140.3 95.9 -17.7 27.6 1.3 37.3 67 68 A E < - 0 0 68 -3,-1.5 -35,-2.7 -36,-0.1 2,-0.4 -0.376 37.4-161.4 -57.2 132.6 29.7 4.3 36.1 68 69 A T E -C 31 0A 71 -37,-0.2 2,-0.4 -3,-0.1 -37,-0.2 -0.990 17.2-166.9-133.2 127.5 29.3 4.2 32.3 69 70 A V E -C 30 0A 13 -39,-2.2 -39,-3.0 -2,-0.4 2,-0.4 -0.916 12.7-156.9-106.7 134.1 31.4 5.8 29.6 70 71 A V E +C 29 0A 67 -2,-0.4 2,-0.3 -41,-0.2 -41,-0.2 -0.959 13.7 175.1-118.2 132.9 30.1 5.8 26.0 71 72 A R E -C 28 0A 65 -43,-2.0 -43,-2.3 -2,-0.4 2,-0.4 -0.964 14.0-162.4-131.4 145.8 32.2 6.1 22.8 72 73 A K E -C 27 0A 132 -2,-0.3 2,-0.4 -45,-0.2 -45,-0.1 -0.995 16.5-148.0-123.5 134.6 31.1 6.0 19.2 73 74 A L - 0 0 8 -47,-0.5 -48,-3.0 -2,-0.4 -47,-0.3 -0.855 15.1-175.6-109.3 144.2 33.9 5.4 16.6 74 75 A S + 0 0 98 -2,-0.4 -1,-0.1 -50,-0.2 -50,-0.1 0.866 59.8 72.7-105.8 -45.6 33.9 6.8 13.1 75 76 A T S S- 0 0 55 1,-0.1 22,-0.2 -27,-0.1 -1,-0.1 -0.541 80.6-121.9 -80.8 126.3 36.9 5.4 11.2 76 77 A P + 0 0 76 0, 0.0 2,-0.3 0, 0.0 22,-0.2 -0.330 66.2 73.8 -63.2 149.6 36.7 1.7 10.1 77 78 A G E S- F 0 97B 25 20,-1.9 20,-3.0 -29,-0.1 2,-0.4 -0.892 82.7 -48.2 142.5-168.8 39.5 -0.5 11.4 78 79 A V E - F 0 96B 84 -2,-0.3 2,-0.4 18,-0.2 18,-0.2 -0.849 41.6-166.3-108.3 136.2 40.8 -2.3 14.4 79 80 A Y E - F 0 95B 4 16,-2.5 16,-2.4 -2,-0.4 2,-0.4 -0.992 8.0-152.4-124.5 120.1 41.2 -0.5 17.8 80 81 A G E - F 0 94B 11 -34,-2.7 -37,-2.7 -2,-0.4 2,-0.3 -0.789 17.8-176.1 -91.9 141.0 43.2 -2.0 20.6 81 82 A V E +EF 42 93B 4 12,-2.2 12,-2.5 -2,-0.4 2,-0.3 -0.979 3.3 177.2-133.5 143.7 42.1 -1.0 24.1 82 83 A Y E -EF 41 92B 65 -41,-2.6 -41,-2.8 -2,-0.3 2,-0.5 -0.953 30.9-122.4-142.0 169.9 43.6 -1.8 27.5 83 84 A C > - 0 0 0 8,-2.1 4,-0.8 -2,-0.3 3,-0.4 -0.957 24.6-143.7-106.0 123.8 43.1 -1.1 31.2 84 85 A E T >4 S+ 0 0 97 -2,-0.5 3,-1.0 1,-0.2 4,-0.3 0.922 95.0 42.8 -61.0 -50.0 46.3 0.4 32.7 85 86 A P T 34 S+ 0 0 54 0, 0.0 -1,-0.2 0, 0.0 3,-0.2 0.829 124.6 37.1 -64.3 -24.3 46.3 -1.2 36.2 86 87 A H T >4>S+ 0 0 32 -3,-0.4 5,-1.9 1,-0.2 3,-1.3 0.301 77.9 109.3-116.2 13.2 45.3 -4.6 34.8 87 88 A A G X<5S+ 0 0 29 -3,-1.0 3,-1.7 -4,-0.8 -1,-0.2 0.904 80.3 54.1 -58.0 -39.5 47.1 -4.8 31.5 88 89 A G G 3 5S+ 0 0 87 -4,-0.3 -1,-0.3 1,-0.3 -2,-0.1 0.664 103.0 57.5 -70.3 -17.9 49.5 -7.5 33.0 89 90 A A G < 5S- 0 0 65 -3,-1.3 -1,-0.3 2,-0.1 -2,-0.2 0.527 127.0 -98.2 -88.0 -4.6 46.4 -9.6 34.0 90 91 A G T < 5 + 0 0 50 -3,-1.7 2,-1.8 -4,-0.5 -3,-0.2 0.603 69.8 152.4 99.5 13.9 45.2 -9.7 30.3 91 92 A M < + 0 0 0 -5,-1.9 -8,-2.1 -8,-0.2 2,-0.3 -0.567 32.9 115.7 -85.7 85.3 42.6 -6.9 30.6 92 93 A K E - F 0 82B 124 -2,-1.8 -77,-0.4 -10,-0.2 2,-0.3 -0.933 41.1-170.3-141.3 154.9 42.8 -5.8 26.9 93 94 A M E - F 0 81B 6 -12,-2.5 -12,-2.2 -2,-0.3 2,-0.4 -0.962 15.5-135.9-149.0 167.3 40.2 -5.9 24.2 94 95 A T E -dF 19 80B 50 -76,-2.3 -74,-1.9 -2,-0.3 2,-0.5 -0.996 12.8-166.1-129.6 131.4 39.8 -5.4 20.4 95 96 A I E -dF 20 79B 0 -16,-2.4 -16,-2.5 -2,-0.4 2,-0.5 -0.978 4.0-161.1-117.5 127.4 37.1 -3.5 18.6 96 97 A T E -dF 21 78B 32 -76,-2.3 -74,-2.9 -2,-0.5 2,-0.5 -0.957 8.2-160.7-108.1 123.8 36.5 -3.8 14.9 97 98 A V E dF 22 77B 3 -20,-3.0 -20,-1.9 -2,-0.5 -74,-0.2 -0.899 360.0 360.0-101.1 133.3 34.5 -1.0 13.4 98 99 A Q 0 0 160 -76,-2.5 -74,-1.9 -2,-0.5 -2,-0.0 -0.959 360.0 360.0-117.1 360.0 32.9 -1.6 10.0