==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/DNA 14-MAR-02 1IV6 . COMPND 2 MOLECULE: TELOMERIC REPEAT BINDING FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.NISHIKAWA,H.OKAMURA,A.NAGADOI,P.KONIG,D.RHODES, . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4809.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 59.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 52.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 378 A R 0 0 300 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 85.4 7.5 -19.8 21.6 2 379 A K - 0 0 203 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.072 360.0 -99.4 -43.4 130.7 7.6 -17.5 18.6 3 380 A R - 0 0 231 1,-0.1 2,-0.4 0, 0.0 -1,-0.1 -0.255 40.7-111.8 -54.7 133.5 5.3 -18.7 15.7 4 381 A Q - 0 0 95 -3,-0.1 2,-0.4 1,-0.0 -1,-0.1 -0.588 24.0-149.9 -75.7 125.7 7.3 -20.5 13.0 5 382 A A - 0 0 80 -2,-0.4 2,-0.0 -3,-0.1 -1,-0.0 -0.808 31.2-106.5 -91.5 132.8 7.5 -18.6 9.7 6 383 A W - 0 0 40 -2,-0.4 2,-0.2 4,-0.1 -1,-0.0 -0.371 36.7-155.9 -64.3 141.3 7.8 -21.1 6.8 7 384 A L > - 0 0 109 -2,-0.0 4,-2.8 1,-0.0 3,-0.4 -0.645 34.3 -96.7-108.5 167.5 11.3 -21.3 5.2 8 385 A W H >>S+ 0 0 181 1,-0.2 4,-2.1 2,-0.2 5,-0.6 0.697 120.4 67.9 -60.1 -18.6 12.3 -22.3 1.6 9 386 A E H >5S+ 0 0 144 3,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.995 113.9 28.2 -62.2 -54.5 13.1 -25.8 3.0 10 387 A E H >5S+ 0 0 14 -3,-0.4 4,-2.6 2,-0.2 -2,-0.2 0.950 128.7 43.1 -65.8 -55.4 9.4 -26.3 3.7 11 388 A D H X5S+ 0 0 28 -4,-2.8 4,-2.7 2,-0.2 -3,-0.2 0.890 116.9 44.9 -62.3 -45.2 8.1 -24.0 0.9 12 389 A K H X5S+ 0 0 119 -4,-2.1 4,-2.3 -5,-0.2 -1,-0.2 0.927 115.8 48.5 -67.8 -41.6 10.5 -25.2 -1.8 13 390 A N H X< - 0 0 28 -4,-1.1 3,-0.5 -5,-0.2 -1,-0.2 0.273 32.8 -94.8 83.7 149.4 -0.3 -32.7 -7.7 23 400 A E T 3 S+ 0 0 52 1,-0.2 2,-2.5 -4,-0.1 6,-0.1 0.993 116.6 45.9 -58.9 -75.8 -1.5 -29.6 -5.8 24 401 A G T 3 S+ 0 0 55 1,-0.2 -1,-0.2 2,-0.1 3,-0.0 -0.332 91.1 90.4 -72.5 57.9 -4.6 -30.9 -3.9 25 402 A N <> + 0 0 54 -2,-2.5 4,-2.4 -3,-0.5 -1,-0.2 -0.340 38.3 149.7-148.2 49.4 -2.8 -34.1 -2.7 26 403 A W H > S+ 0 0 26 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.794 71.7 60.0 -60.2 -29.7 -1.2 -32.9 0.6 27 404 A S H > S+ 0 0 75 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.972 108.0 43.2 -61.4 -55.5 -1.5 -36.5 1.9 28 405 A K H > S+ 0 0 81 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.932 114.0 51.9 -55.2 -50.2 0.8 -37.8 -0.9 29 406 A I H X S+ 0 0 0 -4,-2.4 4,-2.9 1,-0.2 -1,-0.2 0.912 110.8 47.7 -54.1 -48.0 3.1 -34.8 -0.4 30 407 A L H < S+ 0 0 42 -4,-2.7 -1,-0.2 2,-0.2 -2,-0.2 0.835 114.3 47.4 -63.5 -35.4 3.3 -35.5 3.4 31 408 A L H < S+ 0 0 131 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.957 118.9 38.6 -70.9 -50.6 4.0 -39.2 2.7 32 409 A H H < S+ 0 0 97 -4,-3.0 2,-0.4 -5,-0.2 -2,-0.2 0.947 125.2 30.6 -63.9 -55.4 6.7 -38.6 0.1 33 410 A Y S < S- 0 0 58 -4,-2.9 -1,-0.1 -5,-0.2 2,-0.1 -0.899 76.1-134.9-115.8 140.9 8.4 -35.6 1.7 34 411 A K - 0 0 145 -2,-0.4 2,-0.2 -3,-0.1 3,-0.1 -0.432 18.4-175.8 -88.1 162.3 8.9 -34.7 5.4 35 412 A F - 0 0 33 -2,-0.1 3,-0.1 1,-0.1 -25,-0.0 -0.834 43.3 -90.6-145.0 174.1 8.4 -31.3 7.1 36 413 A N S S- 0 0 119 -2,-0.2 -1,-0.1 1,-0.2 -2,-0.0 0.985 99.7 -38.7 -56.6 -66.8 8.9 -30.0 10.6 37 414 A N S S+ 0 0 125 -3,-0.1 2,-0.2 2,-0.1 -1,-0.2 -0.430 90.2 149.9-165.3 73.3 5.4 -30.7 12.0 38 415 A R - 0 0 24 -8,-0.1 2,-0.2 -3,-0.1 -3,-0.1 -0.679 24.8-161.0-112.0 165.9 2.8 -30.0 9.3 39 416 A T > - 0 0 65 -2,-0.2 4,-2.6 1,-0.0 5,-0.2 -0.790 43.1 -92.2-134.1 174.6 -0.7 -31.3 8.4 40 417 A S H > S+ 0 0 63 -2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.908 127.8 53.7 -57.0 -43.6 -3.0 -31.3 5.3 41 418 A V H > S+ 0 0 93 2,-0.2 4,-2.9 1,-0.2 5,-0.3 0.954 110.4 45.6 -55.5 -56.9 -4.5 -28.1 6.8 42 419 A M H > S+ 0 0 65 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.951 115.1 45.7 -53.0 -59.9 -1.1 -26.4 7.1 43 420 A L H X S+ 0 0 0 -4,-2.6 4,-2.6 1,-0.2 5,-0.2 0.918 116.8 44.6 -51.8 -52.3 0.1 -27.3 3.6 44 421 A K H X S+ 0 0 89 -4,-2.7 4,-2.6 -5,-0.2 -1,-0.2 0.940 114.2 47.1 -61.8 -50.8 -3.2 -26.4 1.9 45 422 A D H X S+ 0 0 43 -4,-2.9 4,-2.4 -5,-0.3 5,-0.2 0.860 112.4 52.5 -61.9 -32.1 -3.7 -23.1 3.8 46 423 A R H X S+ 0 0 74 -4,-2.6 4,-2.4 -5,-0.3 -2,-0.2 0.972 113.7 41.5 -63.1 -54.8 -0.0 -22.2 3.1 47 424 A W H X S+ 0 0 9 -4,-2.6 4,-2.9 -5,-0.2 5,-0.2 0.817 111.9 58.8 -62.5 -31.6 -0.5 -22.9 -0.7 48 425 A R H X S+ 0 0 144 -4,-2.6 4,-2.7 2,-0.2 -2,-0.2 0.972 109.2 41.2 -60.9 -59.2 -3.9 -21.1 -0.5 49 426 A T H X S+ 0 0 82 -4,-2.4 4,-1.2 2,-0.2 5,-0.3 0.910 116.0 53.0 -55.5 -46.1 -2.4 -17.8 0.8 50 427 A M H >X S+ 0 0 17 -4,-2.4 4,-2.9 -5,-0.2 3,-0.8 0.965 114.8 37.4 -55.0 -61.9 0.5 -18.2 -1.7 51 428 A K H 3X S+ 0 0 69 -4,-2.9 4,-1.6 3,-0.2 -1,-0.2 0.839 107.1 67.2 -62.4 -35.2 -1.7 -18.7 -4.8 52 429 A K H 3< S+ 0 0 162 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.832 120.8 18.4 -53.7 -36.9 -4.3 -16.1 -3.7 53 430 A L H << S+ 0 0 132 -4,-1.2 -2,-0.2 -3,-0.8 -1,-0.2 0.751 139.3 30.6-103.5 -37.9 -1.7 -13.3 -4.1 54 431 A K H < S- 0 0 124 -4,-2.9 -3,-0.2 -5,-0.3 -2,-0.2 0.663 89.9-139.6-100.5 -22.6 1.0 -14.9 -6.4 55 432 A L < + 0 0 145 -4,-1.6 2,-0.3 -5,-0.5 -4,-0.1 0.985 40.5 152.5 56.8 76.0 -1.0 -17.3 -8.5 56 433 A I 0 0 39 -9,-0.2 -1,-0.2 0, 0.0 -5,-0.1 -0.977 360.0 360.0-133.1 144.5 1.1 -20.5 -8.9 57 434 A S 0 0 97 -2,-0.3 -38,-0.1 -6,-0.0 -39,-0.0 -0.826 360.0 360.0-163.9 360.0 0.1 -24.1 -9.4