==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PRION PROTEIN 08-JUN-06 2IV5 . COMPND 2 MOLECULE: MAJOR PRION PROTEIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.SAVIANO,T.TANCREDI . 23 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2437.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 78.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 17.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 60.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 173 A N > 0 0 143 0, 0.0 4,-2.3 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -50.8 15.3 -3.1 2.4 2 174 A N H > + 0 0 147 2,-0.2 4,-0.8 1,-0.1 0, 0.0 0.940 360.0 41.5 -70.2 -49.3 15.0 0.4 3.7 3 175 A F H >> S+ 0 0 156 2,-0.2 4,-1.5 1,-0.2 3,-0.9 0.929 117.8 46.9 -63.3 -48.2 14.1 1.9 0.3 4 176 A V H 3> S+ 0 0 65 1,-0.3 4,-3.9 2,-0.2 3,-0.3 0.934 101.5 64.7 -59.1 -48.6 11.8 -1.0 -0.6 5 177 A H H 3X S+ 0 0 130 -4,-2.3 4,-1.6 1,-0.3 -1,-0.3 0.795 104.6 49.3 -44.1 -31.7 10.2 -0.9 2.8 6 178 A D H X S+ 0 0 78 -4,-3.9 4,-2.7 2,-0.2 3,-1.9 0.967 113.8 33.2 -48.2 -74.5 6.1 -1.7 0.2 9 181 A N H 3X S+ 0 0 85 -4,-1.6 4,-2.4 1,-0.3 -1,-0.2 0.896 115.4 60.1 -49.4 -45.6 3.8 0.5 2.4 10 182 A I H 3< S+ 0 0 94 -4,-2.6 4,-0.4 1,-0.2 -1,-0.3 0.809 112.2 40.5 -52.9 -30.7 3.6 2.9 -0.5 11 183 A T H XX S+ 0 0 107 -4,-2.0 4,-0.7 -3,-1.9 3,-0.5 0.847 113.6 50.6 -85.4 -39.5 2.1 0.0 -2.4 12 184 A I H 3X S+ 0 0 70 -4,-2.7 4,-1.8 1,-0.2 5,-0.3 0.657 87.5 92.8 -71.5 -16.1 0.0 -1.2 0.5 13 185 A K H 3X S+ 0 0 146 -4,-2.4 4,-1.2 -5,-0.3 3,-0.3 0.915 90.3 39.8 -39.8 -63.5 -1.2 2.3 0.8 14 186 A Q H <4 S+ 0 0 119 -3,-0.5 3,-0.4 -4,-0.4 -1,-0.3 0.878 105.0 71.5 -55.4 -41.0 -4.2 1.6 -1.4 15 187 A H H >X S+ 0 0 98 -4,-0.7 3,-3.3 1,-0.3 4,-2.5 0.910 100.1 43.1 -38.5 -66.2 -4.5 -1.8 0.3 16 188 A T H 3X S+ 0 0 107 -4,-1.8 4,-0.6 1,-0.3 -1,-0.3 0.834 118.5 46.5 -50.9 -35.9 -5.8 -0.2 3.5 17 189 A V H 3< S+ 0 0 71 -4,-1.2 -1,-0.3 -3,-0.4 -2,-0.3 0.074 115.6 50.3 -94.4 22.0 -7.9 2.0 1.2 18 190 A T H <4 S+ 0 0 36 -3,-3.3 -2,-0.2 -5,-0.1 -3,-0.2 0.678 97.2 56.9-120.7 -55.8 -8.9 -1.1 -0.7 19 191 A T H < S+ 0 0 101 -4,-2.5 4,-0.2 4,-0.2 -3,-0.1 0.796 121.6 35.4 -50.2 -30.8 -10.1 -3.7 1.7 20 192 A T S < S+ 0 0 123 -4,-0.6 2,-0.3 -5,-0.4 3,-0.3 0.944 123.7 34.9 -86.5 -68.4 -12.6 -1.1 2.8 21 193 A T S S- 0 0 85 1,-0.3 -1,-0.2 -5,-0.2 0, 0.0 -0.713 129.3 -5.0 -93.0 140.9 -13.5 0.8 -0.3 22 194 A K 0 0 191 -2,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.915 360.0 360.0 40.0 86.6 -13.8 -0.9 -3.7 23 195 A G 0 0 104 -3,-0.3 -1,-0.2 -4,-0.2 -4,-0.2 -0.039 360.0 360.0 -43.1 360.0 -12.6 -4.3 -2.7