==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 12-SEP-02 1IYY . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR K.HATANO,M.KOJIMA,E.SUZUKI,M.TANOKURA,K.TAKAHASHI . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6068.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 44.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 130 0, 0.0 11,-0.1 0, 0.0 10,-0.1 0.000 360.0 360.0 360.0-161.7 2.2 8.9 16.8 2 2 A a + 0 0 31 1,-0.1 10,-0.3 8,-0.1 3,-0.2 0.889 360.0 177.8 38.9 94.2 1.7 9.0 13.0 3 3 A D + 0 0 130 8,-0.3 2,-0.4 1,-0.2 9,-0.1 0.447 67.9 68.6-102.5 -1.4 5.1 7.7 11.7 4 4 A Y E +A 11 0A 61 7,-1.5 2,-1.4 2,-0.1 7,-1.3 -0.520 59.2 162.2-115.1 65.7 4.1 7.9 8.1 5 5 A T E +A 10 0A 63 -2,-0.4 3,-0.4 5,-0.3 5,-0.3 -0.649 14.1 167.0 -86.8 92.5 3.8 11.6 7.4 6 6 A b E > +A 9 0A 8 -2,-1.4 3,-0.8 3,-1.1 -2,-0.1 -0.732 63.7 8.2-104.2 155.8 3.9 11.9 3.6 7 7 A G T 3 S- 0 0 67 -2,-0.3 -1,-0.2 1,-0.3 3,-0.1 0.836 138.2 -56.9 47.4 29.3 3.0 14.9 1.5 8 8 A S T 3 S+ 0 0 113 -3,-0.4 2,-0.3 1,-0.1 -1,-0.3 0.934 111.2 125.6 70.4 43.8 2.8 16.7 4.9 9 9 A N E < -A 6 0A 80 -3,-0.8 2,-1.5 2,-0.0 -3,-1.1 -0.700 54.2-149.3-137.0 86.3 0.2 14.2 6.3 10 10 A a E -A 5 0A 70 -2,-0.3 -5,-0.3 -5,-0.3 2,-0.2 -0.280 25.9-166.0 -54.9 88.3 1.2 12.6 9.6 11 11 A Y E -A 4 0A 37 -2,-1.5 -7,-1.5 -7,-1.3 2,-0.5 -0.557 23.9-111.7 -79.7 144.5 -0.7 9.3 8.9 12 12 A S >> - 0 0 34 -10,-0.3 4,-2.3 -2,-0.2 3,-0.5 -0.629 14.2-148.2 -78.6 122.5 -1.2 7.0 11.9 13 13 A S H 3> S+ 0 0 61 -2,-0.5 4,-0.8 1,-0.3 -1,-0.2 0.831 103.9 52.5 -59.0 -26.6 0.9 3.8 11.4 14 14 A S H 3> S+ 0 0 84 2,-0.2 4,-1.0 1,-0.2 -1,-0.3 0.816 108.4 48.8 -78.9 -28.6 -1.9 2.1 13.3 15 15 A D H <> S+ 0 0 76 -3,-0.5 4,-1.9 1,-0.2 5,-0.2 0.805 103.1 61.8 -79.7 -27.4 -4.5 3.6 11.0 16 16 A V H X S+ 0 0 1 -4,-2.3 4,-1.2 1,-0.2 -1,-0.2 0.849 97.6 59.5 -66.6 -29.9 -2.5 2.4 8.0 17 17 A S H X S+ 0 0 46 -4,-0.8 4,-2.0 -5,-0.2 5,-0.2 0.950 103.0 50.2 -64.4 -46.2 -3.0 -1.2 9.2 18 18 A T H >< S+ 0 0 89 -4,-1.0 3,-0.6 1,-0.3 4,-0.4 0.973 115.2 42.2 -56.9 -51.8 -6.8 -0.9 9.0 19 19 A A H 3X S+ 0 0 16 -4,-1.9 4,-1.4 1,-0.2 3,-0.4 0.761 108.1 64.7 -66.4 -18.8 -6.5 0.4 5.4 20 20 A Q H 3X S+ 0 0 0 -4,-1.2 4,-0.9 1,-0.2 -1,-0.2 0.896 101.8 46.3 -71.1 -36.6 -3.8 -2.3 5.1 21 21 A A H S+ 0 0 20 -4,-0.4 4,-1.1 -3,-0.4 -2,-0.2 0.957 106.1 32.9 -80.5 -54.8 -8.7 -3.0 3.1 23 23 A G H X S+ 0 0 0 -4,-1.4 4,-1.5 2,-0.2 -2,-0.2 0.739 123.5 52.8 -72.9 -18.5 -6.7 -3.7 -0.1 24 24 A Y H X S+ 0 0 29 -4,-0.9 4,-2.4 -5,-0.2 5,-0.5 0.968 100.0 55.1 -80.2 -60.5 -5.8 -7.1 1.5 25 25 A Q H X S+ 0 0 107 -4,-1.7 4,-1.6 1,-0.3 6,-0.2 0.852 114.2 46.6 -41.6 -35.4 -9.3 -8.4 2.3 26 26 A L H X S+ 0 0 35 -4,-1.1 4,-1.6 2,-0.2 5,-0.3 0.938 107.6 53.8 -75.2 -47.1 -10.0 -7.8 -1.4 27 27 A H H < S+ 0 0 70 -4,-1.5 -2,-0.2 1,-0.2 -1,-0.2 0.883 118.1 37.1 -56.2 -37.4 -6.8 -9.4 -2.7 28 28 A E H < S+ 0 0 123 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.822 110.8 59.6 -85.4 -31.5 -7.6 -12.6 -0.8 29 29 A D H < S- 0 0 105 -4,-1.6 -2,-0.2 -5,-0.5 -1,-0.2 0.762 100.6-135.8 -68.1 -20.5 -11.4 -12.4 -1.4 30 30 A G < + 0 0 62 -4,-1.6 -1,-0.1 1,-0.1 -3,-0.1 0.222 69.2 115.0 85.2 -19.0 -10.7 -12.5 -5.1 31 31 A E - 0 0 133 -5,-0.3 2,-0.3 -6,-0.2 -1,-0.1 0.318 55.5-142.0 -63.0-154.8 -13.2 -9.7 -5.6 32 32 A T - 0 0 72 5,-0.1 2,-0.3 -3,-0.1 -1,-0.1 -0.971 1.6-125.2-162.7 174.5 -12.0 -6.3 -6.9 33 33 A V S > S- 0 0 21 -2,-0.3 2,-1.5 -10,-0.0 3,-1.4 -0.918 76.5 -10.8-130.4 158.1 -12.6 -2.6 -6.5 34 34 A G T 3 S- 0 0 57 -2,-0.3 -2,-0.0 1,-0.2 35,-0.0 -0.289 112.4 -72.6 55.6 -89.2 -13.5 0.3 -8.9 35 35 A S T 3 S+ 0 0 103 -2,-1.5 -1,-0.2 0, 0.0 -3,-0.0 0.262 119.4 66.8 171.0 32.6 -12.8 -1.9 -12.0 36 36 A N S < S- 0 0 139 -3,-1.4 -2,-0.1 0, 0.0 -4,-0.0 0.106 101.9-102.0-152.6 25.3 -9.1 -2.5 -12.5 37 37 A S - 0 0 61 -4,-0.5 -5,-0.1 1,-0.1 -3,-0.1 0.908 39.3-169.0 48.0 92.7 -8.0 -4.6 -9.5 38 38 A Y + 0 0 39 -5,-0.1 2,-0.8 1,-0.1 20,-0.2 0.943 69.1 70.1 -79.3 -47.3 -6.3 -2.1 -7.3 39 39 A P S S+ 0 0 4 0, 0.0 2,-0.2 0, 0.0 20,-0.2 -0.590 70.1 151.3 -74.7 108.0 -4.7 -4.5 -4.8 40 40 A H B -B 58 0B 65 18,-1.1 18,-1.5 -2,-0.8 2,-0.5 -0.625 48.6 -88.5-125.7-174.8 -2.0 -6.1 -6.8 41 41 A K - 0 0 130 16,-0.3 2,-0.4 -2,-0.2 16,-0.4 -0.865 33.4-148.0-104.6 131.3 1.4 -7.7 -6.1 42 42 A Y - 0 0 24 -2,-0.5 14,-1.1 38,-0.3 38,-0.0 -0.783 8.0-164.7 -97.3 137.8 4.6 -5.5 -6.0 43 43 A N - 0 0 109 -2,-0.4 -1,-0.1 12,-0.1 14,-0.0 0.815 30.2-144.0 -89.8 -32.5 7.9 -6.9 -7.1 44 44 A N + 0 0 36 3,-0.0 12,-0.0 1,-0.0 10,-0.0 0.456 37.6 156.8 77.2 135.6 10.1 -4.2 -5.7 45 45 A Y + 0 0 194 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 0.331 50.7 86.8-159.5 -38.1 13.3 -3.0 -7.4 46 46 A E S S- 0 0 110 1,-0.1 55,-0.1 54,-0.1 53,-0.0 0.924 106.2 -88.9 -38.7 -73.0 14.1 0.6 -6.3 47 47 A G + 0 0 60 0, 0.0 -1,-0.1 0, 0.0 2,-0.0 0.252 64.7 156.5 155.4 61.7 16.1 -0.5 -3.2 48 48 A F - 0 0 26 1,-0.0 40,-0.0 53,-0.0 53,-0.0 -0.162 36.7-141.7 -90.7-168.0 14.1 -0.9 -0.0 49 49 A D + 0 0 113 38,-0.2 -1,-0.0 -2,-0.0 0, 0.0 0.041 38.1 157.7-145.1 26.6 14.9 -2.9 3.0 50 50 A F - 0 0 26 1,-0.1 37,-0.1 3,-0.0 38,-0.1 0.118 29.4-156.0 -45.6 173.1 11.5 -4.3 4.0 51 51 A S + 0 0 123 35,-0.3 -1,-0.1 36,-0.2 3,-0.1 0.017 63.8 87.9-146.5 30.3 11.5 -7.5 6.2 52 52 A V S S- 0 0 45 1,-0.3 2,-0.2 35,-0.1 35,-0.1 0.768 89.9 -56.1 -96.3 -92.1 8.1 -9.1 5.5 53 53 A S - 0 0 54 1,-0.1 -1,-0.3 27,-0.0 3,-0.1 -0.779 40.3-104.7-142.6-172.9 8.0 -11.5 2.5 54 54 A S S S+ 0 0 103 -2,-0.2 2,-1.9 1,-0.2 -1,-0.1 0.919 101.3 70.0 -85.5 -49.2 8.7 -11.6 -1.3 55 55 A P S S+ 0 0 53 0, 0.0 -1,-0.2 0, 0.0 -12,-0.1 -0.509 72.8 175.2 -74.1 83.4 5.1 -11.4 -2.7 56 56 A Y - 0 0 17 -2,-1.9 2,-0.3 -14,-1.1 25,-0.2 -0.143 13.4-155.5 -79.4-178.0 4.3 -7.8 -1.8 57 57 A Y E - C 0 80B 34 23,-0.9 23,-1.2 -16,-0.4 2,-0.4 -0.991 6.2-136.0-157.9 152.3 1.1 -6.0 -2.7 58 58 A E E +BC 40 79B 16 -18,-1.5 -18,-1.1 -2,-0.3 21,-0.2 -0.923 27.1 156.4-119.6 143.2 0.0 -2.4 -3.2 59 59 A W - 0 0 2 19,-1.0 19,-0.4 -2,-0.4 2,-0.1 -0.951 42.1-105.7-160.8 138.8 -3.2 -0.6 -2.1 60 60 A P - 0 0 1 0, 0.0 2,-0.4 0, 0.0 8,-0.4 -0.379 29.8-152.3 -69.2 142.6 -4.0 3.1 -1.4 61 61 A I - 0 0 5 15,-0.2 2,-0.3 -2,-0.1 -45,-0.1 -0.959 14.4-177.9-119.6 131.6 -4.3 4.2 2.3 62 62 A L - 0 0 53 -2,-0.4 -43,-0.1 -47,-0.1 5,-0.0 -0.800 22.4-163.7-123.1 167.5 -6.4 7.2 3.4 63 63 A S S S+ 0 0 50 -2,-0.3 -1,-0.1 3,-0.0 -47,-0.0 0.154 88.9 21.9-135.7 17.5 -7.1 8.9 6.7 64 64 A S S S+ 0 0 124 2,-0.1 -2,-0.1 0, 0.0 0, 0.0 0.388 119.6 43.1-148.2 -54.2 -10.3 10.9 6.0 65 65 A G S S- 0 0 60 1,-0.2 2,-0.3 0, 0.0 3,-0.0 0.890 92.1-123.6 -67.4 -98.2 -12.3 9.5 3.0 66 66 A D - 0 0 130 -47,-0.0 -1,-0.2 0, 0.0 3,-0.1 -0.970 53.8 -7.4 175.5-162.8 -12.4 5.7 3.2 67 67 A V S S- 0 0 66 -2,-0.3 2,-0.1 1,-0.2 -6,-0.1 -0.238 86.8 -91.7 -52.6 136.5 -11.5 2.5 1.3 68 68 A Y S S+ 0 0 42 -8,-0.4 -1,-0.2 1,-0.1 -34,-0.1 -0.301 80.7 124.8 -52.9 117.8 -10.4 3.4 -2.3 69 69 A S + 0 0 87 -3,-0.1 -1,-0.1 -2,-0.1 -2,-0.1 -0.205 69.7 13.0-177.2 74.1 -13.7 3.2 -4.3 70 70 A G S S+ 0 0 79 1,-0.1 2,-0.3 0, 0.0 -2,-0.0 0.710 113.3 38.7 117.5 62.1 -14.8 6.3 -6.3 71 71 A G S S- 0 0 49 -3,-0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.884 88.6 -78.6 170.3-136.3 -11.9 8.8 -6.6 72 72 A S + 0 0 118 -2,-0.3 -4,-0.0 1,-0.1 0, 0.0 -0.633 35.9 170.4-166.3 101.6 -8.1 8.7 -7.1 73 73 A P + 0 0 35 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.963 23.6 141.2 -77.8 -81.7 -5.6 7.9 -4.3 74 74 A G + 0 0 26 1,-0.2 2,-0.1 17,-0.0 19,-0.1 -0.024 51.2 54.7 61.4-176.9 -2.1 7.4 -6.0 75 75 A A S S+ 0 0 31 17,-1.2 -1,-0.2 16,-0.1 18,-0.1 -0.352 100.7 51.4 56.5-122.0 0.9 8.8 -4.1 76 76 A D + 0 0 23 15,-0.2 -15,-0.2 -3,-0.2 15,-0.2 -0.028 65.3 158.6 -41.4 146.8 0.8 7.2 -0.6 77 77 A R E - D 0 90B 17 13,-0.9 13,-1.2 -17,-0.2 -1,-0.1 -0.403 28.9-148.5-176.4 90.1 0.4 3.4 -0.8 78 78 A V E - D 0 89B 0 -19,-0.4 -19,-1.0 11,-0.2 11,-0.2 -0.360 20.5-141.3 -65.0 144.6 1.3 1.1 2.1 79 79 A V E +CD 58 88B 0 9,-2.0 8,-1.8 -21,-0.2 9,-0.7 -0.596 26.4 161.9-104.8 167.5 2.5 -2.3 0.9 80 80 A F E -C 57 0B 0 -23,-1.2 -23,-0.9 6,-0.3 -38,-0.3 -0.928 30.0-135.9-164.5-173.4 1.9 -5.7 2.4 81 81 A N - 0 0 6 -2,-0.3 -1,-0.1 -25,-0.2 -23,-0.0 0.546 66.2 -56.4-124.1 -81.2 2.0 -9.5 1.7 82 82 A E S S+ 0 0 103 -25,-0.0 -26,-0.1 -54,-0.0 -2,-0.0 0.157 122.6 60.8-158.7 21.5 -0.9 -11.7 2.8 83 83 A N S S- 0 0 78 0, 0.0 -62,-0.1 0, 0.0 -59,-0.0 0.053 105.2-108.8-140.4 23.9 -1.3 -11.2 6.5 84 84 A N S S+ 0 0 72 -64,-0.2 -63,-0.1 -63,-0.0 -64,-0.1 0.746 78.2 138.1 52.8 19.9 -2.0 -7.4 6.7 85 85 A Q - 0 0 103 -65,-0.1 2,-0.1 1,-0.0 -65,-0.1 0.776 57.2-107.0 -60.6-111.7 1.5 -7.2 8.1 86 86 A L - 0 0 48 1,-0.1 -35,-0.3 -66,-0.0 -6,-0.3 -0.459 30.9-174.8 172.8 110.2 3.3 -4.2 6.5 87 87 A A - 0 0 8 -8,-1.8 2,-0.2 1,-0.3 -7,-0.2 0.887 67.1 -81.5 -79.6 -38.9 6.1 -3.9 3.9 88 88 A G E -D 79 0B 5 -9,-0.7 -9,-2.0 -38,-0.1 2,-0.8 -0.680 42.2 -79.9 148.7 156.7 6.3 -0.1 4.3 89 89 A V E -D 78 0B 5 -11,-0.2 14,-2.1 -2,-0.2 2,-0.3 -0.729 50.3-178.0 -87.1 113.5 4.6 3.1 3.2 90 90 A I E -DE 77 102B 0 -13,-1.2 -13,-0.9 -2,-0.8 2,-0.4 -0.784 18.6-131.8-109.3 154.5 5.8 4.0 -0.3 91 91 A T - 0 0 23 10,-1.1 2,-0.4 -2,-0.3 -15,-0.2 -0.827 5.5-156.8-107.8 146.8 4.9 7.0 -2.4 92 92 A H S S+ 0 0 44 -2,-0.4 -17,-1.2 8,-0.1 7,-0.2 -0.551 87.5 35.0-116.8 66.0 3.7 7.0 -6.0 93 93 A T S S+ 0 0 96 6,-0.6 5,-0.3 -2,-0.4 6,-0.1 0.194 92.0 79.0 178.4 -29.7 4.5 10.6 -7.1 94 94 A G S S+ 0 0 66 5,-0.2 2,-0.3 4,-0.2 -2,-0.1 0.356 95.6 56.6 -80.9 10.8 7.8 11.8 -5.3 95 95 A A S >> S- 0 0 24 4,-0.2 3,-1.1 6,-0.0 4,-0.6 -0.996 105.2 -81.3-141.1 147.1 9.8 9.8 -7.8 96 96 A S G >4 S+ 0 0 110 -2,-0.3 3,-1.2 1,-0.3 -2,-0.1 -0.125 125.6 14.7 -43.0 133.3 10.1 9.8 -11.6 97 97 A G G 34 S- 0 0 53 1,-0.3 -1,-0.3 -4,-0.1 -3,-0.1 0.898 127.2 -84.0 62.8 35.0 7.2 7.7 -12.9 98 98 A N G <4 S- 0 0 72 -3,-1.1 -1,-0.3 -5,-0.3 -2,-0.2 0.827 73.0-175.3 34.7 41.7 5.7 8.1 -9.3 99 99 A N << - 0 0 75 -3,-1.2 -6,-0.6 -4,-0.6 2,-0.3 -0.088 28.9 -97.9 -56.9 166.5 8.0 5.1 -8.4 100 100 A F + 0 0 24 -8,-0.2 2,-0.3 -10,-0.1 -8,-0.1 -0.661 48.9 163.3 -91.4 147.5 7.6 3.8 -4.9 101 101 A V - 0 0 27 -2,-0.3 -10,-1.1 -10,-0.2 3,-0.1 -0.929 48.1 -88.7-161.4 134.0 10.0 4.9 -2.1 102 102 A E B -E 90 0B 73 -2,-0.3 2,-0.2 -12,-0.2 -12,-0.2 -0.115 58.5 -98.1 -43.3 135.2 9.8 4.7 1.7 103 103 A b 0 0 27 -14,-2.1 -1,-0.1 1,-0.1 -98,-0.1 -0.406 360.0 360.0 -60.7 121.3 8.1 7.9 2.9 104 104 A T 0 0 187 -2,-0.2 -1,-0.1 -3,-0.1 -98,-0.1 -0.657 360.0 360.0-133.8 360.0 11.0 10.2 3.9