==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-FEB-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 28-JAN-13 4IYL . COMPND 2 MOLECULE: 30S RIBOSOMAL PROTEIN S15; . SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI SUBSP. JEJUNI; . AUTHOR J.OSIPIUK,B.NOCEK,M.GU,K.KWON,W.F.ANDERSON,A.JOACHIMIAK,CENT . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7622.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 78.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 58 68.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A L 0 0 92 0, 0.0 2,-0.0 0, 0.0 32,-0.0 0.000 360.0 360.0 360.0 105.0 12.9 1.6 40.0 2 4 A D > - 0 0 86 1,-0.1 4,-1.5 0, 0.0 5,-0.1 -0.174 360.0 -93.8 -74.9-175.5 11.5 -1.5 38.3 3 5 A S H > S+ 0 0 100 2,-0.2 4,-1.1 1,-0.2 -1,-0.1 0.826 123.1 54.6 -70.0 -32.0 12.0 -1.9 34.5 4 6 A A H > S+ 0 0 46 2,-0.2 4,-1.6 3,-0.1 -1,-0.2 0.891 108.2 44.8 -74.5 -45.0 8.6 -0.3 33.8 5 7 A K H >> S+ 0 0 127 2,-0.2 4,-2.5 1,-0.2 3,-0.9 0.979 110.4 54.9 -64.6 -53.7 9.1 3.0 35.6 6 8 A K H 3X S+ 0 0 81 -4,-1.5 4,-1.6 1,-0.3 -1,-0.2 0.858 111.7 47.3 -37.2 -42.7 12.7 3.3 34.2 7 9 A A H 3X S+ 0 0 56 -4,-1.1 4,-1.7 2,-0.2 -1,-0.3 0.783 107.6 53.6 -80.1 -28.7 10.9 2.9 30.8 8 10 A E H S- 0 0 158 3,-0.1 3,-1.5 0, 0.0 -1,-0.3 -0.942 97.4 -67.7-169.5 158.5 12.6 12.2 19.4 17 19 A P T 3 S+ 0 0 118 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.491 119.9 26.5 -56.2 122.2 12.2 8.5 18.6 18 20 A G T 3 S+ 0 0 76 -2,-0.3 2,-1.8 1,-0.2 3,-0.2 0.351 77.7 141.9 104.0 -3.1 15.3 6.5 19.8 19 21 A D < + 0 0 24 -3,-1.5 -1,-0.2 1,-0.2 -3,-0.1 -0.570 6.9 138.4 -74.1 84.8 16.2 8.9 22.7 20 22 A T S S+ 0 0 105 -2,-1.8 -1,-0.2 -3,-0.1 -9,-0.0 0.446 78.1 38.1 -93.6 -6.1 17.3 6.5 25.3 21 23 A G + 0 0 53 -3,-0.2 2,-0.1 4,-0.1 -2,-0.1 0.060 69.3 133.9-147.5 32.5 20.2 8.9 26.1 22 24 A S > - 0 0 22 1,-0.1 4,-2.5 -9,-0.1 5,-0.3 -0.391 69.4-105.2 -69.2 159.2 19.6 12.7 26.0 23 25 A T H > S+ 0 0 105 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.867 122.8 53.1 -50.7 -36.9 20.9 14.9 28.8 24 26 A E H > S+ 0 0 83 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.896 107.5 48.5 -70.4 -44.2 17.3 15.2 30.0 25 27 A V H > S+ 0 0 0 -12,-0.3 4,-3.1 2,-0.2 5,-0.3 0.983 113.2 47.5 -58.5 -56.8 16.6 11.4 30.1 26 28 A Q H X S+ 0 0 107 -4,-2.5 4,-2.8 1,-0.2 5,-0.2 0.886 112.0 49.6 -54.1 -44.6 19.8 10.7 32.0 27 29 A V H X S+ 0 0 80 -4,-2.0 4,-2.7 -5,-0.3 -1,-0.2 0.958 112.0 48.3 -61.7 -46.5 19.1 13.5 34.5 28 30 A A H X S+ 0 0 15 -4,-2.8 4,-2.2 1,-0.2 -2,-0.2 0.902 114.0 48.0 -59.4 -40.6 15.6 12.2 35.0 29 31 A L H X S+ 0 0 27 -4,-3.1 4,-2.0 2,-0.2 -1,-0.2 0.877 110.5 48.9 -67.5 -38.8 17.0 8.7 35.5 30 32 A L H X S+ 0 0 79 -4,-2.8 4,-3.6 -5,-0.3 5,-0.3 0.916 109.1 55.4 -70.2 -35.5 19.6 9.7 37.9 31 33 A T H X S+ 0 0 85 -4,-2.7 4,-3.0 -5,-0.2 -2,-0.2 0.934 107.4 47.3 -61.5 -48.4 17.0 11.6 39.8 32 34 A A H X S+ 0 0 16 -4,-2.2 4,-2.2 2,-0.2 -1,-0.2 0.917 117.2 44.5 -53.7 -46.8 14.8 8.5 40.2 33 35 A R H X S+ 0 0 141 -4,-2.0 4,-2.4 2,-0.2 5,-0.2 0.961 114.5 46.9 -65.7 -52.4 17.9 6.5 41.3 34 36 A I H X S+ 0 0 100 -4,-3.6 4,-1.7 1,-0.2 -2,-0.2 0.905 112.2 53.2 -56.1 -41.9 19.2 9.1 43.6 35 37 A A H X S+ 0 0 43 -4,-3.0 4,-2.4 -5,-0.3 -1,-0.2 0.923 109.1 46.5 -59.2 -47.8 15.7 9.5 45.1 36 38 A E H X S+ 0 0 93 -4,-2.2 4,-1.1 1,-0.2 -2,-0.2 0.917 114.6 47.7 -64.9 -43.2 15.2 5.8 45.9 37 39 A L H X S+ 0 0 120 -4,-2.4 4,-1.5 1,-0.2 -1,-0.2 0.807 112.4 51.0 -61.0 -33.5 18.7 5.6 47.5 38 40 A T H X S+ 0 0 82 -4,-1.7 4,-2.3 -5,-0.2 -2,-0.2 0.892 106.2 51.3 -77.7 -40.7 18.1 8.7 49.5 39 41 A E H X S+ 0 0 109 -4,-2.4 4,-2.1 2,-0.2 -1,-0.2 0.758 105.7 60.6 -67.7 -20.9 14.7 7.6 50.9 40 42 A H H X S+ 0 0 126 -4,-1.1 4,-1.9 -5,-0.2 -2,-0.2 0.980 108.5 40.6 -63.4 -54.3 16.6 4.4 51.9 41 43 A L H X S+ 0 0 114 -4,-1.5 4,-2.0 1,-0.2 -2,-0.2 0.847 114.5 54.0 -63.8 -36.4 19.0 6.4 54.1 42 44 A K H X S+ 0 0 135 -4,-2.3 4,-2.2 1,-0.2 -1,-0.2 0.931 111.9 42.7 -62.5 -47.4 16.1 8.6 55.4 43 45 A I H X S+ 0 0 64 -4,-2.1 4,-1.8 2,-0.2 -1,-0.2 0.752 111.2 56.2 -77.6 -23.8 14.0 5.7 56.5 44 46 A Y H < S+ 0 0 133 -4,-1.9 4,-0.5 2,-0.2 5,-0.2 0.933 109.7 44.3 -68.3 -51.2 16.9 3.8 58.0 45 47 A K H >X S+ 0 0 148 -4,-2.0 4,-3.0 2,-0.2 3,-1.0 0.930 113.0 53.4 -54.6 -51.5 17.8 6.7 60.2 46 48 A K H 3X S+ 0 0 144 -4,-2.2 4,-1.2 1,-0.2 -2,-0.2 0.900 116.2 37.8 -48.7 -48.0 14.1 7.2 61.1 47 49 A D H 3< S+ 0 0 65 -4,-1.8 4,-0.3 2,-0.2 -1,-0.2 0.307 117.6 49.5 -97.3 4.7 13.8 3.5 62.2 48 50 A F H <> S+ 0 0 74 -3,-1.0 4,-2.1 -4,-0.5 6,-0.3 0.706 111.8 47.3 -99.2 -44.6 17.2 3.2 63.8 49 51 A S H <>S+ 0 0 19 -4,-3.0 5,-1.4 -5,-0.2 6,-0.9 0.839 121.1 40.9 -59.2 -35.2 16.8 6.4 65.9 50 52 A S T ><5S+ 0 0 90 -4,-1.2 3,-1.0 -5,-0.3 -3,-0.2 0.954 115.3 46.8 -76.4 -55.9 13.3 5.1 66.8 51 53 A R T 345S+ 0 0 180 -4,-0.3 -2,-0.2 1,-0.2 -3,-0.1 0.820 121.9 36.9 -59.5 -32.9 14.1 1.3 67.4 52 54 A L T 3<5S- 0 0 108 -4,-2.1 -1,-0.2 4,-0.0 -2,-0.2 0.327 111.0-117.0-107.5 6.5 17.2 2.1 69.5 53 55 A G T <>5 + 0 0 18 -3,-1.0 4,-2.7 -4,-0.2 5,-0.2 0.722 59.9 148.4 73.4 29.1 15.8 5.1 71.3 54 56 A L H > S+ 0 0 123 -6,-0.9 4,-1.9 2,-0.2 -1,-0.2 0.816 111.2 53.8 -68.8 -31.4 15.3 10.5 70.3 56 58 A K H > S+ 0 0 154 -7,-0.4 4,-2.5 2,-0.2 -2,-0.2 0.989 112.5 43.3 -57.8 -61.8 14.4 9.1 73.8 57 59 A L H X S+ 0 0 106 -4,-2.7 4,-2.3 1,-0.2 5,-0.2 0.897 113.4 50.3 -52.5 -50.5 18.0 9.6 75.0 58 60 A V H X S+ 0 0 65 -4,-2.9 4,-2.5 1,-0.2 -1,-0.2 0.911 112.6 46.8 -59.7 -42.3 18.4 13.0 73.4 59 61 A G H X S+ 0 0 6 -4,-1.9 4,-2.1 1,-0.2 -1,-0.2 0.842 109.3 56.3 -68.3 -33.6 15.2 14.3 75.0 60 62 A Q H X S+ 0 0 87 -4,-2.5 4,-1.6 2,-0.2 -1,-0.2 0.943 110.4 43.0 -59.3 -45.3 16.2 12.8 78.3 61 63 A R H X S+ 0 0 120 -4,-2.3 4,-3.3 1,-0.2 5,-0.3 0.917 107.7 60.7 -75.8 -37.7 19.4 14.7 78.3 62 64 A K H X S+ 0 0 117 -4,-2.5 4,-2.3 -5,-0.2 -1,-0.2 0.965 108.3 44.1 -44.6 -57.5 17.6 17.8 77.1 63 65 A R H X S+ 0 0 143 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.816 114.4 48.4 -67.2 -30.5 15.5 17.8 80.3 64 66 A L H X S+ 0 0 101 -4,-1.6 4,-2.0 2,-0.2 -1,-0.2 0.904 111.0 49.3 -76.5 -42.3 18.4 17.0 82.6 65 67 A L H X S+ 0 0 33 -4,-3.3 4,-2.9 2,-0.2 -2,-0.2 0.869 112.1 51.5 -60.1 -37.1 20.6 19.8 81.2 66 68 A S H X S+ 0 0 60 -4,-2.3 4,-1.3 -5,-0.3 -2,-0.2 0.904 111.1 44.9 -67.1 -44.2 17.6 22.1 81.5 67 69 A Y H X S+ 0 0 132 -4,-2.0 4,-2.7 -5,-0.2 5,-0.3 0.834 112.5 54.1 -71.5 -25.7 17.1 21.2 85.1 68 70 A L H X S+ 0 0 31 -4,-2.0 4,-3.0 2,-0.2 8,-0.3 0.937 104.0 53.1 -74.1 -48.3 20.9 21.5 85.6 69 71 A K H < S+ 0 0 99 -4,-2.9 4,-0.3 1,-0.2 -1,-0.2 0.897 117.7 40.9 -35.2 -49.0 21.1 25.1 84.2 70 72 A R H < S+ 0 0 229 -4,-1.3 3,-0.2 2,-0.2 -2,-0.2 0.859 120.4 38.0 -84.0 -45.3 18.4 25.9 86.7 71 73 A K H < S+ 0 0 141 -4,-2.7 2,-0.2 1,-0.2 -3,-0.2 0.909 140.1 3.0 -75.2 -43.9 19.4 24.1 89.8 72 74 A D X + 0 0 71 -4,-3.0 4,-2.4 -5,-0.3 -1,-0.2 -0.666 61.7 177.0-147.3 89.6 23.2 24.7 89.3 73 75 A Y H > S+ 0 0 147 -4,-0.3 4,-2.6 -3,-0.2 5,-0.2 0.805 80.1 56.6 -66.0 -32.9 24.3 26.9 86.4 74 76 A N H > S+ 0 0 101 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.992 112.2 40.8 -62.1 -59.0 28.0 26.8 87.2 75 77 A S H > S+ 0 0 47 1,-0.2 4,-2.8 2,-0.2 -2,-0.2 0.870 113.2 57.5 -53.7 -41.7 28.3 23.0 87.2 76 78 A Y H X S+ 0 0 31 -4,-2.4 4,-2.0 -8,-0.3 -1,-0.2 0.924 109.0 43.1 -55.3 -51.2 26.0 23.0 84.2 77 79 A S H X S+ 0 0 33 -4,-2.6 4,-0.9 2,-0.2 -2,-0.2 0.823 114.2 51.4 -67.3 -33.5 28.3 25.3 82.2 78 80 A K H X S+ 0 0 140 -4,-2.4 4,-2.1 -5,-0.2 -2,-0.2 0.895 110.5 50.9 -64.6 -40.9 31.4 23.3 83.4 79 81 A L H X S+ 0 0 68 -4,-2.8 4,-1.4 -5,-0.2 -2,-0.2 0.900 107.0 49.1 -67.2 -44.3 29.7 20.1 82.3 80 82 A I H <>S+ 0 0 45 -4,-2.0 5,-3.1 1,-0.2 -1,-0.2 0.753 111.5 53.2 -73.8 -18.8 28.8 21.1 78.7 81 83 A T H ><5S+ 0 0 104 -4,-0.9 3,-1.4 3,-0.2 -2,-0.2 0.933 108.2 48.1 -70.9 -53.6 32.4 22.3 78.3 82 84 A E H 3<5S+ 0 0 152 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.1 0.715 116.8 44.5 -61.0 -24.4 33.8 18.9 79.4 83 85 A L T 3<5S- 0 0 94 -4,-1.4 -1,-0.3 -5,-0.1 -2,-0.2 0.341 107.4-124.2-101.4 3.5 31.5 17.1 77.0 84 86 A N T < 5 0 0 149 -3,-1.4 -3,-0.2 -5,-0.1 -2,-0.1 0.955 360.0 360.0 52.2 55.3 32.0 19.4 74.1 85 87 A L < 0 0 100 -5,-3.1 -4,-0.2 -6,-0.1 -1,-0.1 0.463 360.0 360.0-105.8 360.0 28.3 20.1 73.8