==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 25-DEC-02 1J26 . COMPND 2 MOLECULE: IMMATURE COLON CARCINOMA TRANSCRIPT 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR N.NAMEKI,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE,S.Y . 112 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8533.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 53.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 13.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 24.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 116 0, 0.0 2,-1.6 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 169.9 -22.8 31.8 -10.0 2 2 A S - 0 0 127 0, 0.0 2,-0.0 0, 0.0 0, 0.0 -0.713 360.0 -61.1 -69.6 84.8 -20.6 31.8 -13.1 3 3 A S - 0 0 108 -2,-1.6 2,-0.0 1,-0.1 0, 0.0 -0.365 65.6-156.5 50.1-139.9 -20.9 28.0 -13.0 4 4 A G - 0 0 63 -3,-0.1 -1,-0.1 2,-0.1 0, 0.0 0.288 67.1 -13.8 128.3 93.1 -19.5 26.7 -9.7 5 5 A S S S+ 0 0 137 1,-0.2 2,-0.3 4,-0.0 -2,-0.1 0.962 77.7 144.2 49.0 75.3 -18.4 23.0 -9.7 6 6 A S + 0 0 119 3,-0.0 2,-0.2 2,-0.0 -1,-0.2 -0.823 50.3 69.0-136.7 92.8 -20.0 21.5 -12.9 7 7 A G S S- 0 0 75 -2,-0.3 2,-0.1 3,-0.0 3,-0.0 -0.792 94.7 -89.0-177.6-161.2 -17.3 19.1 -14.0 8 8 A E S S+ 0 0 195 -2,-0.2 2,-0.2 1,-0.0 -2,-0.0 -0.601 81.5 102.8-141.8 76.1 -16.2 15.8 -12.5 9 9 A H + 0 0 170 -2,-0.1 2,-0.2 1,-0.0 -1,-0.0 -0.667 23.2 127.6-158.3 96.8 -13.4 16.4 -9.9 10 10 A A + 0 0 102 -2,-0.2 2,-0.4 -5,-0.0 -3,-0.0 -0.728 31.3 144.4-149.1 94.3 -14.1 16.4 -6.2 11 11 A K - 0 0 158 -2,-0.2 3,-0.1 1,-0.2 0, 0.0 -0.993 30.9-174.1-140.2 124.6 -11.6 14.0 -4.4 12 12 A Q S S+ 0 0 171 -2,-0.4 -1,-0.2 1,-0.1 2,-0.1 0.936 77.1 16.8 -74.7 -75.7 -9.9 14.3 -1.0 13 13 A A S S- 0 0 44 1,-0.1 -1,-0.1 43,-0.0 2,-0.1 -0.341 81.5-108.4 -98.2 172.3 -7.6 11.2 -1.2 14 14 A S + 0 0 20 86,-0.1 -1,-0.1 1,-0.1 90,-0.1 -0.297 26.6 171.8 -89.9 175.9 -6.3 9.0 -4.0 15 15 A S + 0 0 69 -2,-0.1 -1,-0.1 0, 0.0 85,-0.1 0.327 68.9 76.2-148.2 -27.4 -7.1 5.4 -5.1 16 16 A Y - 0 0 153 2,-0.0 3,-0.2 84,-0.0 80,-0.0 0.941 69.3-166.0 -57.3 -50.9 -5.3 5.0 -8.5 17 17 A I - 0 0 6 1,-0.1 2,-1.1 38,-0.1 3,-0.1 0.976 24.0-124.8 50.1 95.7 -1.7 4.7 -7.1 18 18 A P >> - 0 0 37 0, 0.0 4,-1.6 0, 0.0 3,-0.7 -0.507 22.6-164.9 -72.9 97.4 0.6 5.2 -10.2 19 19 A L T 34 S+ 0 0 60 -2,-1.1 3,-0.1 1,-0.3 -2,-0.0 0.864 86.5 50.8 -50.1 -46.3 2.7 2.0 -10.1 20 20 A D T 34 S+ 0 0 154 1,-0.2 -1,-0.3 -3,-0.1 4,-0.1 0.771 103.6 57.5 -72.0 -27.3 5.2 3.5 -12.6 21 21 A R T <4 S+ 0 0 172 -3,-0.7 -1,-0.2 2,-0.1 -2,-0.2 0.910 109.0 57.6 -62.8 -42.1 5.7 6.7 -10.6 22 22 A L S < S- 0 0 8 -4,-1.6 2,-0.3 -3,-0.1 26,-0.2 -0.189 95.1-109.7 -73.4 176.9 6.7 4.4 -7.7 23 23 A S E -A 47 0A 43 24,-3.2 24,-1.2 2,-0.0 2,-0.4 -0.817 31.9-159.6-100.3 145.8 9.5 1.9 -7.6 24 24 A I E +A 46 0A 65 -2,-0.3 2,-0.3 22,-0.2 22,-0.2 -0.969 14.0 174.8-120.6 146.5 8.6 -1.8 -7.6 25 25 A S E -A 45 0A 49 20,-2.7 20,-2.3 -2,-0.4 2,-0.2 -0.886 13.1-160.0-143.7 121.7 10.6 -4.8 -6.6 26 26 A Y E +A 44 0A 121 -2,-0.3 2,-0.3 18,-0.2 18,-0.2 -0.553 23.1 172.9 -77.1 163.1 9.4 -8.3 -6.4 27 27 A C E -A 43 0A 60 16,-1.6 16,-2.4 -2,-0.2 -2,-0.0 -0.868 41.0-119.8-153.1-170.6 11.4 -10.6 -4.2 28 28 A R - 0 0 142 -2,-0.3 14,-0.3 14,-0.2 -1,-0.0 0.594 52.9-120.5-113.2 -22.9 11.5 -14.1 -2.7 29 29 A S - 0 0 17 12,-0.1 2,-0.4 1,-0.1 13,-0.0 0.731 18.4-150.2 80.5 122.3 11.5 -13.3 1.1 30 30 A S + 0 0 119 2,-0.0 -1,-0.1 0, 0.0 7,-0.0 -0.929 29.8 150.4-111.4 144.5 14.2 -14.3 3.6 31 31 A G - 0 0 56 -2,-0.4 3,-0.1 6,-0.1 0, 0.0 -0.834 39.1-143.0-175.3 131.8 13.1 -14.8 7.3 32 32 A P S S- 0 0 153 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 0.603 93.7 -12.0 -84.0 -13.2 14.6 -17.1 10.0 33 33 A G S S+ 0 0 73 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.037 103.3 111.0 179.1 37.3 11.3 -18.1 11.7 34 34 A G S S- 0 0 65 1,-0.3 2,-0.1 -3,-0.1 -3,-0.1 0.709 73.6 -15.1 -94.5-109.2 8.5 -15.8 10.5 35 35 A Q S S- 0 0 152 2,-0.0 -1,-0.3 1,-0.0 -4,-0.0 -0.181 75.9 -87.1 -89.5-170.4 5.7 -17.1 8.2 36 36 A N + 0 0 125 -3,-0.1 -2,-0.1 -2,-0.1 -1,-0.0 0.968 65.6 141.5 -68.1 -71.3 5.2 -20.3 6.2 37 37 A V + 0 0 51 1,-0.1 -6,-0.1 2,-0.1 -3,-0.1 0.699 13.0 159.3 32.2 65.0 6.9 -19.3 2.9 38 38 A N S S- 0 0 151 1,-0.0 -1,-0.1 3,-0.0 3,-0.0 0.964 80.6 -21.3 -77.2 -56.9 8.7 -22.6 1.9 39 39 A K S S+ 0 0 179 3,-0.0 2,-1.6 0, 0.0 -2,-0.1 0.424 97.5 117.9-133.8 -9.8 9.1 -22.0 -1.8 40 40 A V - 0 0 61 1,-0.1 2,-1.8 2,-0.1 -3,-0.1 -0.505 42.0-174.1 -70.4 87.0 6.5 -19.4 -2.9 41 41 A N + 0 0 104 -2,-1.6 2,-0.4 1,-0.1 -12,-0.1 -0.405 41.1 116.4 -85.3 58.3 9.1 -16.8 -4.0 42 42 A S + 0 0 24 -2,-1.8 43,-0.3 -14,-0.3 2,-0.3 -0.762 29.4 149.2-133.7 88.7 6.5 -14.0 -4.7 43 43 A K E -A 27 0A 30 -16,-2.4 -16,-1.6 -2,-0.4 2,-0.4 -0.866 32.7-144.9-106.8 152.9 6.9 -10.9 -2.5 44 44 A A E +AB 26 82A 0 38,-0.9 38,-2.0 -2,-0.3 2,-0.3 -0.974 18.0 177.4-118.1 134.8 6.1 -7.3 -3.4 45 45 A E E -AB 25 81A 56 -20,-2.3 -20,-2.7 -2,-0.4 2,-0.4 -0.931 7.2-167.3-128.4 146.3 8.2 -4.4 -2.2 46 46 A V E -AB 24 80A 0 34,-2.1 34,-2.0 -2,-0.3 2,-0.3 -0.994 3.8-174.0-140.8 133.6 7.5 -0.8 -3.2 47 47 A R E +AB 23 79A 101 -24,-1.2 -24,-3.2 -2,-0.4 2,-0.3 -0.959 9.4 164.7-126.8 140.1 9.7 2.2 -2.7 48 48 A F E - B 0 78A 10 30,-1.6 30,-2.7 -2,-0.3 2,-1.1 -0.929 43.8-114.5-149.5 146.2 9.0 5.9 -3.5 49 49 A H E > - B 0 77A 86 -2,-0.3 3,-1.0 28,-0.3 28,-0.3 -0.677 31.8-159.7 -75.6 102.7 10.5 9.3 -2.5 50 50 A L G > S+ 0 0 7 26,-1.5 3,-1.8 -2,-1.1 -1,-0.2 0.854 87.0 55.5 -55.1 -42.7 7.6 10.5 -0.5 51 51 A A G 3 S+ 0 0 53 25,-0.4 -1,-0.3 1,-0.3 11,-0.1 0.823 107.1 51.1 -66.9 -27.1 8.6 14.2 -0.7 52 52 A S G < S+ 0 0 66 -3,-1.0 2,-2.0 1,-0.1 -1,-0.3 0.311 77.7 115.1 -87.5 3.5 8.6 13.9 -4.5 53 53 A A X + 0 0 2 -3,-1.8 3,-2.6 1,-0.2 -1,-0.1 -0.506 34.7 171.2 -78.7 77.0 5.1 12.4 -4.5 54 54 A D T 3 S+ 0 0 121 -2,-2.0 -1,-0.2 1,-0.3 4,-0.1 0.686 76.4 66.7 -56.6 -19.5 3.3 15.3 -6.3 55 55 A W T 3 S+ 0 0 36 -3,-0.2 2,-0.3 2,-0.1 -1,-0.3 0.445 91.9 73.7 -82.6 -5.1 0.3 12.8 -6.4 56 56 A I S < S- 0 0 11 -3,-2.6 2,-0.2 -6,-0.2 -43,-0.0 -0.822 93.6-103.7-105.0 149.7 0.0 13.1 -2.5 57 57 A E >> - 0 0 71 -2,-0.3 4,-3.1 1,-0.1 3,-1.0 -0.476 28.1-116.4 -67.5 143.9 -1.3 16.2 -0.7 58 58 A E H 3> S+ 0 0 126 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.841 116.4 46.9 -46.8 -45.4 1.1 18.6 0.9 59 59 A P H 34 S+ 0 0 75 0, 0.0 4,-0.4 0, 0.0 -1,-0.2 0.777 116.2 46.0 -74.6 -20.5 -0.3 17.9 4.5 60 60 A V H <> S+ 0 0 0 -3,-1.0 4,-2.3 2,-0.2 5,-0.3 0.850 105.2 59.8 -89.5 -38.7 -0.2 14.1 3.8 61 61 A R H X S+ 0 0 55 -4,-3.1 4,-1.9 1,-0.2 -3,-0.1 0.975 109.8 42.3 -50.6 -61.9 3.3 14.1 2.3 62 62 A Q H X S+ 0 0 112 -4,-1.5 4,-0.7 1,-0.2 -1,-0.2 0.734 110.9 59.1 -64.9 -21.8 4.8 15.5 5.5 63 63 A K H >>>S+ 0 0 100 -4,-0.4 4,-3.2 2,-0.2 3,-1.9 0.992 106.4 44.3 -66.1 -61.0 2.6 13.1 7.5 64 64 A I H 3X5S+ 0 0 2 -4,-2.3 4,-1.2 1,-0.3 8,-0.2 0.820 107.2 63.1 -51.6 -34.5 4.0 9.8 5.9 65 65 A A H 3<5S+ 0 0 29 -4,-1.9 -1,-0.3 -5,-0.3 -2,-0.2 0.817 123.5 16.4 -56.5 -36.7 7.4 11.4 6.4 66 66 A L H X<5S+ 0 0 128 -3,-1.9 3,-1.3 -4,-0.7 4,-0.3 0.840 128.8 46.6-101.2 -57.8 6.8 11.3 10.2 67 67 A T H 3<5S+ 0 0 79 -4,-3.2 -3,-0.2 1,-0.3 -2,-0.1 0.647 127.0 30.7 -73.3 -20.6 3.9 9.0 10.9 68 68 A H T >X S- 0 0 125 1,-0.1 4,-0.6 -45,-0.1 -2,-0.2 -0.426 71.4-138.4 -81.0 161.3 0.4 -13.9 -7.8 88 88 A Q H >> S+ 0 0 144 2,-0.1 4,-1.7 1,-0.1 3,-0.9 0.978 99.0 35.3 -79.9 -71.7 2.4 -10.8 -8.9 89 89 A F H 3> S+ 0 0 140 1,-0.2 4,-2.6 2,-0.2 -1,-0.1 0.673 109.8 67.2 -60.0 -22.1 -0.1 -7.9 -8.9 90 90 A R H 3> S+ 0 0 152 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.930 106.5 38.0 -66.9 -46.7 -2.0 -9.4 -5.8 91 91 A N H XX S+ 0 0 6 -3,-0.9 4,-1.9 -4,-0.6 3,-0.5 0.939 118.6 50.1 -67.4 -47.0 0.9 -8.9 -3.4 92 92 A L H 3X S+ 0 0 5 -4,-1.7 4,-2.4 1,-0.2 5,-0.2 0.886 104.4 59.5 -57.2 -39.9 1.7 -5.5 -5.1 93 93 A A H 3X S+ 0 0 20 -4,-2.6 4,-1.9 1,-0.2 -1,-0.2 0.854 104.8 49.2 -59.9 -38.6 -2.1 -4.6 -4.7 94 94 A E H X S+ 0 0 37 -4,-2.3 4,-2.6 2,-0.2 3,-0.6 0.949 109.6 47.6 -59.3 -48.9 -6.2 8.3 4.4 105 105 A E H 3< S+ 0 0 123 -4,-2.8 -1,-0.2 1,-0.3 -2,-0.2 0.775 116.5 44.9 -67.6 -26.9 -5.0 8.3 8.0 106 106 A A H 3< S+ 0 0 12 -4,-0.6 -1,-0.3 -5,-0.2 -2,-0.2 0.686 115.0 48.9 -82.6 -24.5 -2.7 11.3 7.1 107 107 A S H << S- 0 0 46 -4,-1.5 -2,-0.2 -3,-0.6 -3,-0.2 0.943 124.3 -57.8 -86.5 -52.7 -5.5 13.1 5.2 108 108 A G < - 0 0 34 -4,-2.6 -1,-0.3 -5,-0.1 -2,-0.1 -0.897 53.1 -85.1 175.2 155.8 -8.4 12.9 7.7 109 109 A P + 0 0 140 0, 0.0 3,-0.0 0, 0.0 -4,-0.0 -0.290 42.6 157.3 -72.8 162.9 -10.5 10.4 9.7 110 110 A S S S- 0 0 124 -2,-0.0 2,-0.2 -5,-0.0 -5,-0.0 0.396 71.3 -20.7-156.4 -53.3 -13.6 8.9 8.1 111 111 A S 0 0 120 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.669 360.0 360.0-175.6 120.2 -14.5 5.6 9.9 112 112 A G 0 0 132 -2,-0.2 0, 0.0 -3,-0.0 0, 0.0 -0.135 360.0 360.0 143.1 360.0 -12.0 3.6 12.1