==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-DEC-02 1J27 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN TT1725; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; . AUTHOR A.SETO,M.SHIROUZU,T.TERADA,K.MURAYAMA,S.KURAMITSU,S.YOKOYAMA . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6079.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 72.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 32 32.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 29.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 166 0, 0.0 97,-2.1 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 135.4 45.3 9.4 8.0 2 2 A K E -A 97 0A 91 95,-0.2 2,-0.4 60,-0.2 95,-0.2 -0.834 360.0-138.3-117.8 155.3 42.3 9.8 10.3 3 3 A A E -A 96 0A 18 93,-2.9 93,-2.8 -2,-0.3 2,-0.5 -0.895 26.2-150.6-100.4 132.1 39.7 12.6 11.1 4 4 A Y E -AB 95 61A 50 57,-2.6 57,-1.9 -2,-0.4 2,-0.5 -0.933 9.8-165.9-109.5 132.7 39.0 12.7 14.9 5 5 A L E -AB 94 60A 52 89,-3.0 89,-2.8 -2,-0.5 2,-0.4 -0.954 6.7-157.0-116.5 130.6 35.6 13.9 16.2 6 6 A G E -AB 93 59A 0 53,-2.4 53,-1.6 -2,-0.5 2,-0.5 -0.867 10.2-168.3 -99.6 139.6 34.9 14.8 19.7 7 7 A L E -AB 92 58A 60 85,-2.6 85,-1.5 -2,-0.4 2,-0.4 -0.967 4.1-175.6-130.6 118.1 31.2 14.6 20.8 8 8 A Y E +AB 91 57A 0 49,-2.8 49,-2.2 -2,-0.5 2,-0.3 -0.918 3.6 179.3-110.4 133.6 30.2 16.1 24.1 9 9 A T E +AB 90 56A 21 81,-2.4 81,-2.4 -2,-0.4 2,-0.3 -0.969 4.2 174.6-133.3 150.6 26.6 15.7 25.4 10 10 A A E -AB 89 55A 5 45,-2.4 45,-2.2 -2,-0.3 2,-0.6 -0.999 32.7-126.0-152.4 153.8 25.1 17.0 28.6 11 11 A R E -AB 88 54A 83 77,-2.6 76,-2.9 -2,-0.3 77,-1.1 -0.920 30.7-162.0 -98.4 119.8 21.9 17.3 30.6 12 12 A L E -AB 86 53A 0 41,-2.9 41,-1.8 -2,-0.6 2,-0.5 -0.800 3.3-155.2 -97.1 145.0 21.3 21.0 31.6 13 13 A E E -AB 85 52A 75 72,-2.4 72,-2.3 -2,-0.3 39,-0.3 -0.991 16.0-175.3-118.1 132.8 18.9 21.9 34.4 14 14 A T - 0 0 12 37,-1.9 70,-0.1 -2,-0.5 8,-0.1 -0.907 33.1-134.3-128.4 153.0 17.3 25.4 34.3 15 15 A P + 0 0 86 0, 0.0 36,-0.1 0, 0.0 69,-0.1 0.323 62.9 132.5 -84.8 13.8 15.1 27.3 36.7 16 16 A A - 0 0 0 34,-0.4 -2,-0.1 1,-0.1 34,-0.1 -0.219 42.9-167.6 -70.1 158.9 12.9 28.5 33.8 17 17 A R S S+ 0 0 167 1,-0.1 2,-0.3 33,-0.1 -1,-0.1 0.217 72.6 40.9-127.8 11.4 9.1 28.4 33.7 18 18 A S S > S- 0 0 47 32,-0.2 4,-2.3 1,-0.1 5,-0.2 -0.975 80.1-117.2-152.0 158.2 8.5 29.1 29.9 19 19 A L H > S+ 0 0 88 -2,-0.3 4,-2.3 1,-0.2 5,-0.2 0.850 116.2 51.8 -67.2 -33.4 10.1 27.9 26.7 20 20 A K H > S+ 0 0 177 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.897 110.1 47.3 -70.3 -38.7 11.1 31.5 25.9 21 21 A E H > S+ 0 0 92 2,-0.2 4,-1.2 1,-0.2 -2,-0.2 0.916 112.5 51.2 -65.2 -41.8 12.7 32.1 29.3 22 22 A K H >X S+ 0 0 0 -4,-2.3 4,-2.2 1,-0.2 3,-0.6 0.917 108.3 50.8 -61.4 -44.9 14.5 28.7 28.9 23 23 A R H 3X S+ 0 0 123 -4,-2.3 4,-2.3 1,-0.2 -1,-0.2 0.892 105.5 56.7 -60.0 -38.9 15.9 29.7 25.5 24 24 A A H 3< S+ 0 0 68 -4,-1.8 -1,-0.2 1,-0.2 -2,-0.2 0.805 110.1 45.8 -63.5 -28.0 17.1 33.0 26.9 25 25 A L H << S+ 0 0 46 -4,-1.2 4,-0.4 -3,-0.6 -2,-0.2 0.876 124.1 30.8 -79.4 -40.1 19.2 30.9 29.5 26 26 A I H X S+ 0 0 0 -4,-2.2 4,-2.2 -5,-0.1 3,-0.4 0.930 109.9 56.7 -88.8 -48.2 20.6 28.4 27.0 27 27 A K H X S+ 0 0 89 -4,-2.3 4,-2.6 1,-0.2 5,-0.2 0.895 105.5 50.1 -58.0 -47.7 21.0 30.0 23.6 28 28 A P H > S+ 0 0 58 0, 0.0 4,-2.3 0, 0.0 -1,-0.2 0.878 111.1 50.8 -60.8 -33.2 23.3 32.9 24.6 29 29 A A H > S+ 0 0 1 -4,-0.4 4,-2.5 -3,-0.4 -2,-0.2 0.922 111.2 47.5 -68.8 -42.4 25.6 30.4 26.4 30 30 A L H X S+ 0 0 11 -4,-2.2 4,-2.2 2,-0.2 -1,-0.2 0.871 111.0 52.3 -66.5 -33.8 25.8 28.2 23.4 31 31 A E H X S+ 0 0 92 -4,-2.6 4,-1.7 -5,-0.2 -2,-0.2 0.923 110.8 46.9 -68.1 -40.2 26.5 31.2 21.2 32 32 A R H X S+ 0 0 113 -4,-2.3 4,-1.6 1,-0.2 -2,-0.2 0.897 110.4 53.7 -65.3 -38.2 29.3 32.3 23.5 33 33 A L H X S+ 0 0 1 -4,-2.5 4,-1.8 1,-0.2 6,-0.2 0.919 109.3 47.6 -59.4 -45.8 30.6 28.7 23.4 34 34 A K H < S+ 0 0 93 -4,-2.2 -1,-0.2 1,-0.2 5,-0.2 0.813 110.7 52.4 -64.0 -35.4 30.7 28.7 19.6 35 35 A A H < S+ 0 0 91 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.795 117.3 37.5 -72.3 -29.7 32.5 32.1 19.6 36 36 A R H < S+ 0 0 152 -4,-1.6 -2,-0.2 -3,-0.2 -1,-0.2 0.649 120.3 37.6 -95.9 -22.3 35.2 30.8 21.9 37 37 A F S < S- 0 0 27 -4,-1.8 2,-2.6 -5,-0.2 -1,-0.2 -0.987 83.7-111.8-134.0 150.6 35.7 27.2 20.7 38 38 A P S S+ 0 0 81 0, 0.0 22,-0.4 0, 0.0 2,-0.3 -0.289 72.2 128.8 -79.6 60.2 35.7 25.6 17.3 39 39 A V - 0 0 19 -2,-2.6 2,-0.6 -6,-0.2 20,-0.2 -0.753 60.5-135.5-121.7 158.7 32.6 23.7 17.8 40 40 A S E -C 58 0A 78 18,-2.4 18,-2.1 -2,-0.3 2,-0.3 -0.976 36.0-164.2-103.1 120.5 29.1 22.9 16.3 41 41 A A E -C 57 0A 24 -2,-0.6 2,-0.3 16,-0.2 16,-0.3 -0.791 8.9-175.5-111.9 152.2 26.6 23.1 19.1 42 42 A A E -C 56 0A 41 14,-2.8 14,-2.3 -2,-0.3 2,-0.7 -1.000 30.7-134.6-148.6 147.0 23.0 21.8 19.3 43 43 A R E +C 55 0A 66 -2,-0.3 12,-0.2 12,-0.2 3,-0.1 -0.890 38.9 173.2 -93.7 119.5 19.9 21.8 21.5 44 44 A L E - 0 0 62 10,-2.3 2,-0.3 -2,-0.7 11,-0.2 0.950 42.1 -4.5-101.2 -59.2 18.9 18.1 21.2 45 45 A Y E S+C 54 0A 168 9,-1.6 9,-2.9 1,-0.1 -1,-0.3 -0.867 101.1 53.3-141.5 167.0 16.1 16.8 23.4 46 46 A G > + 0 0 17 -2,-0.3 3,-1.6 7,-0.2 6,-0.3 0.724 62.1 143.2 79.3 22.7 13.8 17.9 26.1 47 47 A L T 3 + 0 0 86 1,-0.3 -2,-0.1 -3,-0.2 6,-0.1 0.599 65.3 58.9 -75.8 -8.5 12.8 20.9 23.9 48 48 A D T 3 S+ 0 0 130 -29,-0.0 -1,-0.3 2,-0.0 2,-0.2 0.470 97.9 82.3 -91.6 -1.5 9.2 20.6 25.1 49 49 A A < - 0 0 9 -3,-1.6 -31,-0.1 3,-0.2 -32,-0.1 -0.657 61.5-155.1-107.6 155.6 10.4 21.2 28.7 50 50 A W S S+ 0 0 130 -2,-0.2 -34,-0.4 -34,-0.1 -32,-0.2 0.819 89.1 42.2 -92.0 -35.1 11.3 24.2 30.8 51 51 A G S S+ 0 0 23 -36,-0.1 -37,-1.9 -38,-0.1 2,-0.3 0.429 113.4 27.4 -99.7 -2.6 13.6 22.8 33.4 52 52 A Y E +B 13 0A 102 -6,-0.3 2,-0.3 -39,-0.3 -3,-0.2 -0.976 55.0 173.9-153.8 158.0 15.9 20.4 31.7 53 53 A E E -B 12 0A 0 -41,-1.8 -41,-2.9 -2,-0.3 2,-0.6 -0.973 27.9-129.8-161.8 149.2 17.4 19.8 28.2 54 54 A V E +BC 11 45A 52 -9,-2.9 -10,-2.3 -2,-0.3 -9,-1.6 -0.959 38.4 166.2-106.4 122.9 19.9 17.6 26.5 55 55 A V E +BC 10 43A 1 -45,-2.2 -45,-2.4 -2,-0.6 2,-0.3 -0.774 6.9 173.6-122.8 173.9 22.5 19.6 24.5 56 56 A G E -BC 9 42A 6 -14,-2.3 -14,-2.8 -2,-0.3 2,-0.3 -0.985 15.9-150.4-165.9 175.1 25.8 18.8 22.9 57 57 A F E -BC 8 41A 5 -49,-2.2 -49,-2.8 -2,-0.3 2,-0.3 -0.982 8.0-161.1-150.7 159.4 28.6 19.9 20.7 58 58 A T E -BC 7 40A 47 -18,-2.1 -18,-2.4 -2,-0.3 2,-0.3 -0.944 5.3-173.7-137.5 161.0 31.1 18.3 18.3 59 59 A L E -B 6 0A 7 -53,-1.6 -53,-2.4 -2,-0.3 2,-0.3 -0.988 12.8-139.1-152.7 159.0 34.4 19.3 16.8 60 60 A L E +B 5 0A 109 -22,-0.4 2,-0.3 -2,-0.3 -55,-0.2 -0.910 28.3 145.8-123.8 143.3 36.9 18.0 14.2 61 61 A G E -B 4 0A 14 -57,-1.9 -57,-2.6 -2,-0.3 -2,-0.0 -0.986 50.3-119.4-163.2 174.3 40.7 17.8 14.1 62 62 A N S S+ 0 0 144 -2,-0.3 -60,-0.2 -59,-0.2 -57,-0.1 0.378 98.5 63.0-100.9 5.5 43.7 15.8 13.0 63 63 A D > - 0 0 70 -59,-0.1 4,-2.6 1,-0.1 5,-0.2 -0.966 66.1-157.8-134.6 110.0 45.1 15.3 16.5 64 64 A P H > S+ 0 0 52 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.799 94.3 54.6 -60.2 -30.8 43.0 13.4 19.0 65 65 A A H > S+ 0 0 62 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.902 111.0 45.0 -70.7 -40.0 44.8 14.9 22.0 66 66 A W H > S+ 0 0 107 2,-0.2 4,-2.7 1,-0.2 5,-0.3 0.926 113.5 50.4 -68.2 -45.5 44.0 18.5 20.8 67 67 A V H X S+ 0 0 0 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.950 115.5 42.6 -56.0 -47.2 40.3 17.5 19.9 68 68 A E H X S+ 0 0 78 -4,-2.3 4,-2.8 2,-0.2 5,-0.2 0.924 114.7 49.2 -67.3 -42.0 39.9 16.0 23.4 69 69 A E H X S+ 0 0 144 -4,-2.6 4,-2.4 1,-0.2 -1,-0.2 0.929 113.5 46.8 -65.1 -40.6 41.6 18.8 25.3 70 70 A T H X S+ 0 0 20 -4,-2.7 4,-2.6 -5,-0.2 -1,-0.2 0.906 111.8 51.1 -66.4 -43.1 39.6 21.4 23.4 71 71 A M H X S+ 0 0 2 -4,-2.4 4,-2.3 -5,-0.3 -2,-0.2 0.917 111.2 47.7 -61.2 -43.1 36.4 19.5 24.1 72 72 A R H X S+ 0 0 90 -4,-2.8 4,-2.0 1,-0.2 -2,-0.2 0.901 112.4 49.5 -68.8 -32.8 37.1 19.3 27.8 73 73 A A H X S+ 0 0 31 -4,-2.4 4,-2.2 -5,-0.2 -1,-0.2 0.901 110.9 49.7 -68.9 -38.5 38.0 23.0 28.0 74 74 A A H X S+ 0 0 0 -4,-2.6 4,-2.4 1,-0.2 -1,-0.2 0.886 109.6 51.8 -67.5 -36.7 34.7 23.8 26.1 75 75 A A H X S+ 0 0 3 -4,-2.3 4,-1.7 2,-0.2 -1,-0.2 0.892 108.7 50.0 -64.8 -43.2 32.7 21.7 28.6 76 76 A R H X S+ 0 0 151 -4,-2.0 4,-0.8 2,-0.2 -2,-0.2 0.915 110.6 51.7 -59.8 -40.7 34.3 23.4 31.6 77 77 A F H >X S+ 0 0 34 -4,-2.2 3,-1.1 1,-0.2 4,-0.5 0.923 107.1 51.8 -62.5 -47.1 33.4 26.8 29.9 78 78 A L H >< S+ 0 0 3 -4,-2.4 3,-0.9 1,-0.3 4,-0.4 0.869 106.8 53.5 -57.5 -36.5 29.8 25.6 29.5 79 79 A A H 3< S+ 0 0 56 -4,-1.7 3,-0.3 1,-0.2 -1,-0.3 0.722 107.5 53.5 -72.3 -16.1 29.6 24.7 33.2 80 80 A E H << S+ 0 0 145 -3,-1.1 -1,-0.2 -4,-0.8 -2,-0.2 0.465 83.2 86.4 -95.0 -7.8 30.8 28.3 34.0 81 81 A A S << S- 0 0 30 -3,-0.9 -1,-0.2 -4,-0.5 -2,-0.1 0.889 76.1-164.9 -62.3 -35.1 28.1 30.0 32.0 82 82 A G + 0 0 36 -4,-0.4 -1,-0.1 2,-0.3 2,-0.1 -0.212 59.0 96.8 73.1-175.0 25.7 29.9 34.9 83 83 A G S S+ 0 0 49 -54,-0.0 2,-0.3 -69,-0.0 -1,-0.1 -0.079 102.8 28.6 84.7 -35.8 22.0 30.6 34.4 84 84 A F S S- 0 0 11 -70,-0.1 2,-0.4 -59,-0.1 -2,-0.3 -0.912 82.8-121.6-148.0 163.7 21.8 26.8 34.3 85 85 A Q E -A 13 0A 140 -72,-2.3 -72,-2.4 -2,-0.3 2,-0.8 -0.914 16.0-130.0-111.9 145.8 23.6 23.8 35.7 86 86 A V E +A 12 0A 36 -2,-0.4 -74,-0.2 -74,-0.2 3,-0.1 -0.870 33.1 176.0 -92.4 107.8 25.4 21.0 33.8 87 87 A A E + 0 0 41 -76,-2.9 2,-0.3 -2,-0.8 -1,-0.2 0.830 60.8 3.1 -87.4 -33.9 23.9 18.0 35.7 88 88 A L E -A 11 0A 119 -77,-1.1 -77,-2.6 2,-0.0 -1,-0.3 -0.972 69.1-177.4-150.2 150.4 25.3 15.0 33.8 89 89 A E E -A 10 0A 101 -2,-0.3 2,-0.4 -79,-0.2 -79,-0.2 -0.980 12.4-158.5-151.7 161.8 27.7 14.8 30.9 90 90 A E E -A 9 0A 97 -81,-2.4 -81,-2.4 -2,-0.3 2,-0.4 -0.995 5.9-156.8-144.6 136.8 29.4 12.4 28.5 91 91 A F E +A 8 0A 49 -2,-0.4 2,-0.3 -83,-0.2 -83,-0.2 -0.931 14.6 176.1-113.8 140.6 32.5 12.7 26.4 92 92 A R E -A 7 0A 94 -85,-1.5 -85,-2.6 -2,-0.4 2,-0.4 -0.984 13.7-164.7-140.1 149.2 33.3 10.6 23.3 93 93 A L E -A 6 0A 56 -2,-0.3 2,-0.4 -87,-0.2 -87,-0.2 -0.997 12.3-175.2-135.2 125.7 36.1 10.6 20.7 94 94 A E E -A 5 0A 96 -89,-2.8 -89,-3.0 -2,-0.4 2,-0.4 -0.952 12.1-148.4-122.1 149.3 35.7 8.8 17.4 95 95 A A E -A 4 0A 55 -2,-0.4 2,-0.4 -91,-0.2 -91,-0.2 -0.935 9.0-165.3-117.5 139.5 38.2 8.3 14.6 96 96 A F E -A 3 0A 102 -93,-2.8 -93,-2.9 -2,-0.4 2,-0.2 -0.986 19.9-128.2-128.2 127.4 37.4 8.1 10.9 97 97 A E E A 2 0A 121 -2,-0.4 -95,-0.2 -95,-0.2 -2,-0.0 -0.491 360.0 360.0 -73.1 140.2 39.7 6.8 8.2 98 98 A L 0 0 122 -97,-2.1 -1,-0.1 -2,-0.2 -96,-0.0 -0.413 360.0 360.0-100.8 360.0 40.2 9.2 5.3