==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 12-FEB-03 1J3S . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.-Y.JENG,J.-H.SHIU,Y.-H.TSAI,W.-J.CHUANG . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6826.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 67 64.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 33.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 91 0, 0.0 2,-0.3 0, 0.0 92,-0.1 0.000 360.0 360.0 360.0 137.7 -9.6 9.3 7.4 2 2 A D > - 0 0 97 1,-0.1 4,-0.7 91,-0.0 95,-0.1 -0.960 360.0-129.1-157.6 173.8 -12.4 6.9 6.6 3 3 A V H > S+ 0 0 72 -2,-0.3 4,-1.6 2,-0.2 -1,-0.1 0.854 107.0 46.3 -98.9 -49.2 -13.2 3.5 5.1 4 4 A E H 4 S+ 0 0 148 1,-0.2 4,-0.5 2,-0.2 -1,-0.1 0.670 115.4 53.0 -68.7 -11.8 -16.0 4.2 2.6 5 5 A K H >> S+ 0 0 115 2,-0.2 4,-1.3 1,-0.1 3,-1.1 0.922 104.6 48.5 -88.4 -52.5 -13.9 7.2 1.5 6 6 A G H 3X>S+ 0 0 0 -4,-0.7 4,-2.1 1,-0.3 5,-0.5 0.881 100.7 69.6 -56.0 -34.7 -10.5 5.5 0.7 7 7 A K H 3X5S+ 0 0 67 -4,-1.6 4,-1.6 1,-0.3 -1,-0.3 0.913 103.5 42.0 -51.1 -42.1 -12.5 2.9 -1.3 8 8 A K H <>5S+ 0 0 110 -3,-1.1 4,-0.6 -4,-0.5 -1,-0.3 0.794 110.7 59.6 -77.1 -25.5 -13.2 5.6 -3.9 9 9 A I H >X5S+ 0 0 15 -4,-1.3 3,-1.0 -3,-0.2 4,-0.6 0.998 114.8 30.9 -66.6 -62.4 -9.6 6.9 -3.7 10 10 A F H >X5S+ 0 0 9 -4,-2.1 3,-1.0 1,-0.3 4,-0.7 0.923 120.3 54.7 -62.8 -40.3 -7.9 3.7 -4.7 11 11 A I H 3< + 0 0 23 -2,-0.7 3,-0.8 10,-0.3 4,-0.3 -0.664 4.9 175.9 -84.9 98.0 -7.7 -4.0 -9.7 20 20 A V T 3 S+ 0 0 7 -2,-1.3 -1,-0.2 1,-0.2 -5,-0.1 0.231 80.4 43.4 -85.7 17.9 -8.0 -5.3 -6.1 21 21 A E T 3 S+ 0 0 103 -6,-0.1 -1,-0.2 2,-0.0 -2,-0.1 0.030 89.8 87.3-149.2 31.6 -11.6 -6.3 -6.8 22 22 A K S < S- 0 0 147 -3,-0.8 -2,-0.1 3,-0.1 4,-0.1 0.845 103.1 -71.5 -97.6 -77.0 -11.6 -8.0 -10.2 23 23 A G S S- 0 0 64 -4,-0.3 3,-0.1 2,-0.2 -3,-0.1 0.049 73.9 -70.6 179.5 52.2 -10.8 -11.7 -10.0 24 24 A G S S+ 0 0 53 1,-0.2 2,-0.6 -5,-0.2 7,-0.1 0.734 95.6 136.3 59.2 16.6 -7.1 -12.4 -9.0 25 25 A K - 0 0 144 -6,-0.2 2,-0.5 5,-0.1 -2,-0.2 -0.842 31.7-179.5 -99.8 124.0 -6.4 -11.2 -12.6 26 26 A H + 0 0 43 -2,-0.6 5,-0.1 1,-0.1 -8,-0.1 -0.828 14.0 156.4-124.7 95.5 -3.4 -8.8 -12.8 27 27 A K S S- 0 0 188 -2,-0.5 -1,-0.1 -10,-0.1 -10,-0.1 0.960 79.8 -2.1 -82.1 -73.9 -2.7 -7.6 -16.4 28 28 A T S S+ 0 0 98 -12,-0.3 -11,-0.1 1,-0.1 -10,-0.1 0.956 132.7 39.4 -84.8 -63.1 -0.8 -4.2 -16.2 29 29 A G S S- 0 0 4 -12,-0.7 -10,-0.3 -13,-0.2 2,-0.1 -0.609 97.1 -97.8 -88.5 152.2 -0.6 -3.6 -12.4 30 30 A P - 0 0 14 0, 0.0 2,-0.5 0, 0.0 -1,-0.1 -0.398 48.4 -94.8 -66.8 134.3 0.1 -6.3 -9.9 31 31 A N > - 0 0 27 1,-0.2 2,-1.5 -2,-0.1 3,-0.6 -0.298 37.3-160.4 -53.0 103.0 -3.0 -7.7 -8.2 32 32 A L T 3 + 0 0 16 -2,-0.5 -1,-0.2 1,-0.2 -12,-0.1 -0.240 55.7 117.7 -83.1 51.5 -3.0 -5.5 -5.0 33 33 A H T 3 S+ 0 0 105 -2,-1.5 -1,-0.2 1,-0.1 -2,-0.1 0.567 95.8 4.8 -93.5 -8.5 -5.3 -7.9 -3.2 34 34 A G S <> S+ 0 0 30 -3,-0.6 4,-0.5 69,-0.0 -1,-0.1 0.083 78.6 137.2-162.0 31.1 -2.7 -8.7 -0.5 35 35 A L T >4 + 0 0 11 2,-0.1 3,-0.8 -5,-0.1 2,-0.7 0.822 55.5 91.6 -55.5 -28.1 0.3 -6.4 -1.2 36 36 A F T 34 S+ 0 0 30 1,-0.2 24,-0.2 62,-0.2 3,-0.1 -0.561 103.6 5.2 -72.3 113.8 0.4 -5.9 2.6 37 37 A G T 34 S+ 0 0 69 22,-1.7 2,-0.4 -2,-0.7 -1,-0.2 0.172 110.6 101.7 100.4 -19.8 2.8 -8.5 4.0 38 38 A R << - 0 0 39 -3,-0.8 21,-0.6 -4,-0.5 -1,-0.3 -0.824 66.1-136.6-101.6 136.5 3.8 -9.8 0.6 39 39 A K B -A 58 0A 97 -2,-0.4 19,-0.1 19,-0.2 14,-0.1 -0.365 38.4 -80.7 -82.4 167.5 7.2 -8.8 -1.0 40 40 A T S S+ 0 0 1 17,-0.8 -1,-0.2 12,-0.2 10,-0.1 -0.141 104.6 46.5 -61.7 165.2 7.5 -7.9 -4.7 41 41 A G + 0 0 24 -3,-0.1 -2,-0.1 1,-0.0 6,-0.1 0.924 66.6 122.6 65.4 94.5 7.7 -10.7 -7.3 42 42 A Q + 0 0 127 4,-0.2 -2,-0.1 1,-0.2 5,-0.0 0.408 40.0 89.2-149.1 -48.3 4.9 -13.3 -6.5 43 43 A A - 0 0 19 1,-0.1 3,-0.5 2,-0.1 5,-0.3 -0.310 62.8-145.6 -61.6 146.4 2.5 -13.8 -9.4 44 44 A P S S+ 0 0 128 0, 0.0 2,-1.4 0, 0.0 -1,-0.1 0.959 94.9 40.3 -78.7 -60.3 3.6 -16.6 -11.8 45 45 A G S S+ 0 0 73 2,-0.1 2,-0.3 1,-0.0 -19,-0.1 -0.261 107.8 79.1 -86.2 52.8 2.4 -15.2 -15.2 46 46 A Y - 0 0 44 -2,-1.4 2,-2.2 -3,-0.5 -4,-0.2 -0.824 68.6-146.7-160.0 118.5 3.4 -11.7 -14.3 47 47 A S - 0 0 108 -2,-0.3 3,-0.4 -6,-0.1 -2,-0.1 -0.478 36.2-163.9 -83.3 71.0 6.9 -10.1 -14.4 48 48 A Y - 0 0 14 -2,-2.2 2,-1.7 -5,-0.3 3,-0.1 0.170 50.6 -52.4 -44.3 177.3 6.1 -7.9 -11.3 49 49 A T > - 0 0 20 1,-0.2 4,-2.1 2,-0.1 -1,-0.2 -0.319 60.5-169.7 -58.6 88.6 8.4 -4.9 -10.7 50 50 A A H > S+ 0 0 56 -2,-1.7 4,-2.3 -3,-0.4 5,-0.2 0.906 81.8 59.3 -50.8 -40.6 11.6 -7.0 -10.8 51 51 A A H >> S+ 0 0 20 1,-0.2 4,-2.3 2,-0.2 3,-1.0 0.981 104.5 45.7 -52.5 -72.5 13.4 -3.9 -9.5 52 52 A N H 3>>S+ 0 0 0 1,-0.3 5,-1.2 2,-0.2 4,-0.9 0.876 111.1 56.2 -37.2 -49.4 11.4 -3.6 -6.2 53 53 A K H ><5S+ 0 0 102 -4,-2.1 3,-0.9 1,-0.2 -1,-0.3 0.937 109.7 44.1 -53.8 -48.3 11.8 -7.4 -5.7 54 54 A N H <<5S+ 0 0 118 -4,-2.3 -1,-0.2 -3,-1.0 -2,-0.2 0.943 102.1 65.0 -65.0 -45.2 15.6 -7.2 -5.9 55 55 A K H 3<5S- 0 0 115 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.774 107.0-129.7 -50.0 -21.0 15.8 -4.1 -3.6 56 56 A G T <<5 + 0 0 42 -4,-0.9 2,-0.4 -3,-0.9 -3,-0.2 0.939 48.2 163.3 71.8 43.9 14.4 -6.5 -1.0 57 57 A I < - 0 0 9 -5,-1.2 -17,-0.8 -4,-0.0 2,-0.7 -0.803 33.9-141.4 -99.3 137.5 11.6 -4.1 0.0 58 58 A I B -A 39 0A 82 -2,-0.4 2,-0.5 -19,-0.1 -19,-0.2 -0.839 23.8-123.1 -98.5 115.6 8.6 -5.3 2.0 59 59 A W + 0 0 8 -2,-0.7 -22,-1.7 -21,-0.6 -21,-0.2 -0.377 57.4 136.9 -59.0 111.1 5.4 -3.7 0.8 60 60 A G > - 0 0 17 -2,-0.5 4,-0.9 -24,-0.2 5,-0.1 -0.566 64.7 -79.1-136.4-158.7 4.0 -2.0 4.0 61 61 A E H > S+ 0 0 97 -2,-0.2 4,-1.5 2,-0.2 -1,-0.1 0.978 125.1 24.8 -75.8 -74.1 2.3 1.3 5.0 62 62 A D H > S+ 0 0 109 1,-0.2 4,-1.5 2,-0.2 -1,-0.1 0.891 121.8 59.0 -60.0 -36.9 5.3 3.7 5.3 63 63 A T H > S+ 0 0 48 1,-0.2 4,-1.7 2,-0.2 3,-0.3 0.947 107.4 45.2 -59.3 -45.0 7.3 1.6 2.9 64 64 A L H X S+ 0 0 23 -4,-0.9 4,-1.8 1,-0.2 -1,-0.2 0.803 102.6 68.8 -69.0 -25.0 4.7 2.1 0.2 65 65 A M H X S+ 0 0 40 -4,-1.5 4,-1.7 2,-0.2 -1,-0.2 0.940 105.2 39.7 -59.7 -44.8 4.6 5.8 1.1 66 66 A E H X S+ 0 0 120 -4,-1.5 4,-1.4 -3,-0.3 3,-0.4 0.983 113.6 51.0 -70.0 -56.9 8.1 6.2 -0.3 67 67 A Y H < S+ 0 0 13 -4,-1.7 7,-0.2 1,-0.3 -1,-0.2 0.832 115.0 47.3 -51.3 -28.7 7.8 4.0 -3.4 68 68 A L H < S+ 0 0 31 -4,-1.8 17,-0.4 -5,-0.2 -1,-0.3 0.839 98.7 65.0 -84.0 -31.5 4.6 6.0 -4.1 69 69 A E H < S- 0 0 71 -4,-1.7 16,-0.2 -3,-0.4 -2,-0.2 0.843 133.8 -6.8 -58.8 -26.1 6.2 9.4 -3.6 70 70 A N X - 0 0 73 -4,-1.4 4,-1.9 -5,-0.1 5,-0.3 -0.593 60.9-178.4-171.8 102.5 8.3 8.4 -6.6 71 71 A P H > S+ 0 0 10 0, 0.0 4,-1.0 0, 0.0 6,-0.4 0.818 93.2 44.6 -75.4 -32.7 8.1 4.9 -8.2 72 72 A K H 4 S+ 0 0 144 2,-0.1 -5,-0.0 10,-0.1 -2,-0.0 0.797 117.3 44.9 -82.5 -28.0 10.8 5.8 -10.8 73 73 A K H 4 S+ 0 0 143 -6,-0.1 -1,-0.1 3,-0.1 -6,-0.1 0.848 121.6 37.7 -83.8 -34.0 13.1 7.5 -8.2 74 74 A Y H < S+ 0 0 68 -4,-1.9 -2,-0.1 1,-0.3 -7,-0.1 0.971 128.4 25.3 -79.5 -68.4 12.7 4.7 -5.6 75 75 A I S >< S- 0 0 0 -4,-1.0 2,-2.2 -5,-0.3 3,-0.6 -0.864 71.5-153.0-103.0 111.2 12.7 1.6 -7.8 76 76 A P T 3 S+ 0 0 97 0, 0.0 -4,-0.1 0, 0.0 -3,-0.1 -0.472 86.0 47.9 -78.4 70.4 14.4 2.1 -11.1 77 77 A G T 3 + 0 0 33 -2,-2.2 -27,-0.1 -6,-0.4 -5,-0.1 0.217 69.8 117.0-173.0 -40.3 12.4 -0.6 -13.0 78 78 A T < - 0 0 24 -3,-0.6 -1,-0.1 -7,-0.4 -30,-0.0 -0.023 49.7-152.0 -42.6 151.6 8.7 -0.2 -12.4 79 79 A K + 0 0 194 -3,-0.0 2,-0.7 2,-0.0 -1,-0.2 0.307 60.0 111.8-111.8 7.1 6.8 0.6 -15.6 80 80 A M - 0 0 47 1,-0.1 2,-1.1 -9,-0.1 -8,-0.1 -0.705 52.9-159.8 -86.0 117.8 3.9 2.5 -13.9 81 81 A I + 0 0 161 -2,-0.7 -1,-0.1 -10,-0.1 -2,-0.0 -0.274 28.2 172.3 -88.9 51.0 4.1 6.2 -14.9 82 82 A F - 0 0 51 -2,-1.1 -10,-0.1 1,-0.1 2,-0.1 -0.231 37.3-105.2 -59.5 149.8 2.0 7.2 -11.9 83 83 A V - 0 0 103 1,-0.1 -1,-0.1 -13,-0.1 3,-0.1 -0.470 42.6 -94.3 -76.2 149.3 1.6 10.9 -11.2 84 84 A G - 0 0 35 -2,-0.1 -15,-0.1 1,-0.1 2,-0.1 -0.326 46.4-105.6 -61.9 143.1 3.6 12.3 -8.3 85 85 A I + 0 0 27 -17,-0.4 3,-0.1 -16,-0.2 -1,-0.1 -0.442 37.9 176.4 -70.3 142.6 1.5 12.5 -5.1 86 86 A K + 0 0 174 1,-0.2 -1,-0.1 -2,-0.1 2,-0.1 0.159 68.5 48.0-131.9 16.8 0.4 16.0 -4.1 87 87 A K >> - 0 0 104 1,-0.1 4,-1.5 2,-0.0 3,-0.6 -0.548 51.6-175.7-159.3 86.9 -1.7 15.3 -1.0 88 88 A K H 3> S+ 0 0 124 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.844 86.1 68.6 -55.5 -29.3 -0.3 13.0 1.7 89 89 A E H 3> S+ 0 0 156 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.968 100.5 44.5 -55.4 -52.8 -3.7 13.3 3.4 90 90 A E H <> S+ 0 0 54 -3,-0.6 4,-1.5 1,-0.2 -1,-0.2 0.869 108.4 60.1 -61.4 -33.0 -5.5 11.3 0.6 91 91 A R H X S+ 0 0 17 -4,-1.5 4,-2.0 1,-0.2 3,-0.5 0.948 100.9 53.0 -62.1 -44.9 -2.6 8.8 0.8 92 92 A A H X S+ 0 0 60 -4,-2.3 4,-1.5 1,-0.3 -1,-0.2 0.935 108.3 50.6 -56.7 -42.7 -3.4 8.0 4.5 93 93 A D H X S+ 0 0 22 -4,-1.6 4,-1.6 -5,-0.2 -1,-0.3 0.821 106.3 58.5 -65.6 -26.4 -7.0 7.4 3.5 94 94 A L H >X S+ 0 0 9 -4,-1.5 4,-2.0 -3,-0.5 3,-0.7 0.994 104.0 46.7 -66.6 -59.9 -5.6 5.0 0.7 95 95 A I H 3X S+ 0 0 27 -4,-2.0 4,-1.5 1,-0.3 -1,-0.2 0.854 107.1 63.5 -50.5 -32.5 -3.7 2.7 3.1 96 96 A A H 3X S+ 0 0 32 -4,-1.5 4,-1.2 -5,-0.3 -1,-0.3 0.953 105.1 42.1 -60.0 -49.3 -6.9 2.7 5.2 97 97 A Y H XX S+ 0 0 23 -4,-1.6 4,-1.7 -3,-0.7 3,-0.9 0.967 116.7 46.8 -64.3 -50.3 -9.0 1.1 2.4 98 98 A L H 3X S+ 0 0 9 -4,-2.0 4,-1.5 1,-0.3 -1,-0.2 0.747 108.6 58.8 -64.7 -18.5 -6.3 -1.4 1.5 99 99 A K H 3< S+ 0 0 93 -4,-1.5 4,-0.3 -5,-0.4 -1,-0.3 0.792 103.7 50.6 -80.9 -25.7 -5.8 -2.1 5.2 100 100 A K H << S+ 0 0 97 -4,-1.2 4,-0.2 -3,-0.9 -2,-0.2 0.877 125.0 26.3 -78.0 -37.7 -9.5 -3.2 5.5 101 101 A A H < S+ 0 0 46 -4,-1.7 3,-0.5 3,-0.2 -2,-0.2 0.914 136.2 28.1 -90.9 -54.8 -9.3 -5.6 2.6 102 102 A T S < S+ 0 0 19 -4,-1.5 -3,-0.2 -5,-0.3 -2,-0.1 0.253 135.5 32.4 -92.7 16.2 -5.6 -6.6 2.5 103 103 A N 0 0 83 -4,-0.3 -1,-0.2 -6,-0.2 -2,-0.1 0.112 360.0 360.0-156.8 29.0 -5.1 -6.1 6.2 104 104 A E 0 0 182 -3,-0.5 -3,-0.2 -4,-0.2 -4,-0.2 0.377 360.0 360.0-160.3 360.0 -8.3 -6.9 8.0