==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ENDOCYTOSIS/EXOCYTOSIS 13-FEB-03 1J3T . COMPND 2 MOLECULE: INTERSECTIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.NAMEKI,S.KOSHIBA,N.TOCHIO,N.KOBAYASHI,M.INOUE,T.KIGAWA, . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5623.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 47.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 27.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 130 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 138.0 -8.4 13.2 20.7 2 2 A S - 0 0 130 1,-0.2 2,-0.3 0, 0.0 0, 0.0 0.810 360.0 -14.8 -76.8 -33.3 -7.2 16.8 20.8 3 3 A S S S+ 0 0 121 1,-0.0 -1,-0.2 0, 0.0 3,-0.0 -0.966 70.9 116.3-155.8 168.1 -4.6 16.7 18.0 4 4 A G - 0 0 60 -2,-0.3 -1,-0.0 -3,-0.1 0, 0.0 0.416 50.5-130.1 127.2 105.8 -2.6 14.2 15.8 5 5 A S - 0 0 130 1,-0.1 -1,-0.0 2,-0.1 0, 0.0 0.436 39.4-160.9 -56.2 -7.4 -3.0 13.9 12.0 6 6 A S + 0 0 108 1,-0.1 -1,-0.1 2,-0.1 -2,-0.0 -0.125 46.4 108.3 59.9-163.9 -3.4 10.0 12.2 7 7 A G + 0 0 72 1,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.878 17.7 139.8 71.2 56.4 -2.7 8.0 9.0 8 8 A V + 0 0 147 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.254 40.1 162.3-106.2 32.0 0.5 6.0 9.3 9 9 A E - 0 0 134 1,-0.1 3,-0.1 27,-0.0 -3,-0.0 -0.160 40.0 -92.7 -66.2 156.4 -1.3 3.1 7.6 10 10 A N - 0 0 92 1,-0.2 28,-0.1 27,-0.0 -1,-0.1 0.105 54.9 -70.9 -54.8 171.8 0.4 0.1 5.9 11 11 A L - 0 0 49 26,-0.1 26,-2.3 25,-0.1 2,-0.4 -0.262 45.8-155.2 -64.2 146.5 1.3 -0.2 2.3 12 12 A K E -A 36 0A 64 52,-0.3 52,-1.6 24,-0.3 2,-0.4 -0.962 7.6-169.1-121.1 150.2 -1.4 -0.6 -0.3 13 13 A A E -AB 35 63A 0 22,-2.1 22,-2.3 -2,-0.4 2,-0.4 -0.997 18.1-135.2-136.0 130.1 -1.1 -2.2 -3.7 14 14 A Q E -AB 34 62A 60 48,-1.8 48,-1.9 -2,-0.4 20,-0.2 -0.745 25.5-120.5 -84.7 130.8 -3.8 -2.0 -6.4 15 15 A A E - B 0 61A 0 18,-2.5 17,-2.2 -2,-0.4 46,-0.3 -0.508 15.7-159.8 -71.7 139.6 -4.6 -5.3 -8.2 16 16 A L S S+ 0 0 80 44,-3.1 2,-0.3 1,-0.2 45,-0.2 0.574 75.9 13.9 -96.1 -16.4 -4.1 -5.2 -12.0 17 17 A C S S- 0 0 71 43,-0.7 -1,-0.2 13,-0.2 2,-0.2 -0.959 89.7 -93.5-155.0 154.7 -6.3 -8.3 -12.8 18 18 A S - 0 0 71 -2,-0.3 2,-0.3 13,-0.1 12,-0.3 -0.540 40.3-179.4 -74.9 141.6 -9.0 -10.2 -10.9 19 19 A W B -F 29 0B 28 10,-2.4 10,-2.2 -2,-0.2 2,-0.1 -0.905 15.5-149.1-146.2 114.3 -7.7 -13.4 -9.0 20 20 A T - 0 0 99 -2,-0.3 7,-0.1 8,-0.2 8,-0.1 -0.331 33.1-100.1 -65.2 158.2 -10.0 -15.7 -7.0 21 21 A A + 0 0 37 1,-0.1 -1,-0.1 5,-0.1 3,-0.1 -0.274 38.2 174.6 -70.7 169.3 -8.5 -17.5 -4.0 22 22 A K + 0 0 136 1,-0.7 -1,-0.1 5,-0.1 6,-0.0 0.335 63.0 44.2-138.9 -70.7 -7.4 -21.2 -4.3 23 23 A K S > S- 0 0 132 1,-0.1 3,-1.2 4,-0.1 -1,-0.7 -0.295 92.9-106.3 -63.4 167.1 -5.6 -22.3 -1.1 24 24 A D T 3 S+ 0 0 167 1,-0.2 -1,-0.1 -3,-0.1 -3,-0.0 0.977 121.9 47.7 -49.0 -63.7 -7.1 -21.4 2.3 25 25 A N T 3 S+ 0 0 83 29,-0.1 30,-2.5 -4,-0.1 2,-0.4 0.157 89.4 109.6 -75.4 12.7 -4.4 -18.8 2.9 26 26 A H B < -c 55 0A 27 -3,-1.2 30,-0.2 28,-0.3 -5,-0.1 -0.809 66.6-127.7 -91.8 137.9 -4.8 -17.2 -0.6 27 27 A L - 0 0 0 28,-2.5 2,-0.4 -2,-0.4 27,-0.1 -0.347 15.4-143.0 -70.8 159.3 -6.2 -13.7 -0.9 28 28 A N + 0 0 81 21,-0.3 2,-0.3 -7,-0.1 -8,-0.2 -0.996 30.4 155.7-128.6 121.2 -9.2 -13.0 -3.3 29 29 A F B -F 19 0B 10 -10,-2.2 -10,-2.4 -2,-0.4 2,-0.3 -0.934 31.4-130.0-135.8 167.0 -9.4 -9.7 -5.3 30 30 A S > - 0 0 62 -2,-0.3 3,-2.2 -12,-0.3 -15,-0.3 -0.720 48.4 -73.4-104.9 162.2 -10.9 -8.1 -8.4 31 31 A K T 3 S+ 0 0 117 1,-0.3 -15,-0.2 -2,-0.3 -13,-0.1 -0.426 121.2 10.6 -55.9 122.8 -9.2 -6.0 -11.0 32 32 A H T 3 S+ 0 0 111 -17,-2.2 -1,-0.3 1,-0.3 -16,-0.1 0.389 91.4 142.8 74.9 9.4 -8.5 -2.5 -9.6 33 33 A D < - 0 0 34 -3,-2.2 -18,-2.5 -16,-0.1 2,-0.5 -0.305 50.2-127.2 -61.0 160.1 -9.3 -3.5 -6.0 34 34 A I E -A 14 0A 74 -20,-0.2 2,-0.4 -3,-0.1 -20,-0.2 -0.974 24.3-161.7-117.8 120.7 -7.0 -1.9 -3.4 35 35 A I E -A 13 0A 0 -22,-2.3 -22,-2.1 -2,-0.5 2,-0.9 -0.916 21.1-127.2-112.9 132.0 -5.4 -4.3 -1.0 36 36 A T E -AD 12 48A 35 12,-2.8 12,-2.2 -2,-0.4 -24,-0.3 -0.707 30.1-144.4 -70.3 101.9 -3.9 -3.4 2.4 37 37 A V E + D 0 47A 4 -26,-2.3 10,-0.3 -2,-0.9 -26,-0.1 -0.523 29.1 167.4 -65.8 145.3 -0.4 -4.9 2.1 38 38 A L E + 0 0 55 8,-2.9 2,-0.3 1,-0.5 9,-0.2 0.536 58.2 3.0-139.5 -25.2 0.7 -6.3 5.4 39 39 A E E - D 0 46A 126 7,-1.5 7,-2.0 2,-0.0 -1,-0.5 -0.961 58.1-140.4-161.2 163.6 3.9 -8.5 4.8 40 40 A Q E - D 0 45A 103 -2,-0.3 5,-0.2 5,-0.3 2,-0.1 -0.929 13.6-179.1-138.9 106.6 6.2 -9.6 1.9 41 41 A Q - 0 0 118 3,-2.7 -2,-0.0 -2,-0.4 5,-0.0 -0.139 67.0 -60.0 -73.6-169.9 7.7 -13.0 1.3 42 42 A E S S- 0 0 164 1,-0.2 3,-0.1 -2,-0.1 -2,-0.0 0.701 122.1 -28.5 -43.5 -33.3 10.0 -13.5 -1.8 43 43 A N S S+ 0 0 77 1,-0.3 15,-3.0 13,-0.0 2,-0.3 0.277 122.0 90.8-163.0 -37.1 7.1 -12.5 -4.1 44 44 A W E - E 0 57A 81 13,-0.3 -3,-2.7 14,-0.1 2,-0.4 -0.662 59.9-163.2 -74.5 132.8 4.0 -13.5 -2.3 45 45 A W E -DE 40 56A 16 11,-3.0 11,-2.1 -2,-0.3 2,-0.4 -0.913 15.8-130.9-117.4 143.3 2.6 -10.6 -0.1 46 46 A F E +DE 39 55A 52 -7,-2.0 -8,-2.9 -2,-0.4 -7,-1.5 -0.807 43.3 151.4 -85.8 134.7 0.1 -10.9 2.7 47 47 A G E -D 37 0A 0 7,-2.7 2,-0.4 -2,-0.4 7,-0.3 -0.980 36.8-127.1-164.2 165.6 -2.7 -8.4 2.4 48 48 A E E +D 36 0A 50 -12,-2.2 -12,-2.8 -2,-0.3 2,-0.3 -0.924 27.0 159.5-122.6 127.3 -6.3 -7.7 3.3 49 49 A V S > S- 0 0 8 -2,-0.4 3,-0.6 -14,-0.2 -21,-0.3 -0.946 72.4 -1.6-148.7 128.0 -9.2 -6.6 1.0 50 50 A H T 3 S- 0 0 147 -2,-0.3 -1,-0.1 1,-0.2 -15,-0.0 0.941 127.4 -54.8 48.6 56.4 -12.9 -7.0 1.7 51 51 A G T 3 S+ 0 0 70 1,-0.1 -1,-0.2 -3,-0.0 -3,-0.0 0.502 114.0 100.3 76.9 10.1 -12.5 -8.8 5.1 52 52 A G < - 0 0 39 -3,-0.6 -4,-0.1 -24,-0.1 -2,-0.1 0.973 52.9-160.9 -82.4 -72.7 -10.3 -11.7 4.0 53 53 A R + 0 0 146 -6,-0.2 2,-0.3 -4,-0.1 -5,-0.2 0.225 33.0 133.8 60.6 151.9 -6.6 -11.5 4.7 54 54 A G - 0 0 3 -7,-0.3 -7,-2.7 -27,-0.1 2,-0.3 -0.881 50.7 -83.5 161.7 179.0 -4.5 -14.0 2.6 55 55 A W E +cE 26 46A 43 -30,-2.5 -28,-2.5 -2,-0.3 -9,-0.2 -0.762 38.4 172.4-106.2 153.7 -1.4 -14.2 0.5 56 56 A F E - E 0 45A 0 -11,-2.1 -11,-3.0 -2,-0.3 2,-0.4 -0.970 41.0-100.3-158.4 144.8 -0.9 -13.3 -3.2 57 57 A P E > - E 0 44A 21 0, 0.0 3,-1.9 0, 0.0 -13,-0.3 -0.539 31.8-139.7 -63.5 122.5 2.0 -13.0 -5.8 58 58 A K G > S+ 0 0 79 -15,-3.0 3,-2.0 -2,-0.4 -14,-0.1 0.607 92.9 83.3 -59.2 -15.3 2.7 -9.3 -6.0 59 59 A S G 3 S+ 0 0 99 1,-0.3 -1,-0.3 -16,-0.2 -15,-0.1 0.819 84.5 59.4 -61.1 -27.6 3.1 -9.7 -9.8 60 60 A Y G < S+ 0 0 93 -3,-1.9 -44,-3.1 -45,-0.1 -43,-0.7 0.450 113.8 37.5 -74.9 -5.7 -0.8 -9.4 -10.0 61 61 A V E < -B 15 0A 10 -3,-2.0 2,-0.3 -46,-0.3 -46,-0.2 -0.749 68.8-137.7-133.3 177.4 -0.6 -5.9 -8.3 62 62 A K E -B 14 0A 111 -48,-1.9 -48,-1.8 -2,-0.2 2,-0.2 -0.987 28.7-110.9-135.8 146.4 1.4 -2.7 -8.2 63 63 A I E -B 13 0A 80 -2,-0.3 -50,-0.2 -50,-0.3 -52,-0.0 -0.511 34.0-146.7 -63.7 146.8 2.4 -0.6 -5.2 64 64 A I - 0 0 38 -52,-1.6 -52,-0.3 1,-0.2 3,-0.1 -0.778 6.6-141.8-111.6 150.7 0.6 2.8 -5.2 65 65 A P - 0 0 108 0, 0.0 2,-0.3 0, 0.0 -1,-0.2 0.809 69.0 -38.8 -74.0-100.2 2.0 6.1 -3.8 66 66 A G - 0 0 33 2,-0.0 2,-0.8 0, 0.0 0, 0.0 -0.780 55.0-105.7-116.9 170.5 -0.9 7.9 -2.1 67 67 A S S > S+ 0 0 107 -2,-0.3 3,-0.8 -3,-0.1 2,-0.0 -0.123 71.1 173.1 -76.4 32.3 -4.6 8.1 -3.0 68 68 A E T 3 - 0 0 131 -2,-0.8 4,-0.1 1,-0.2 -2,-0.0 -0.223 46.1 -20.5 -78.1 136.8 -3.5 11.6 -3.9 69 69 A S T 3 S+ 0 0 143 1,-0.2 -1,-0.2 2,-0.1 3,-0.1 0.526 116.8 83.2 52.1 15.9 -5.4 14.5 -5.7 70 70 A G S < S- 0 0 59 -3,-0.8 2,-0.2 1,-0.5 -1,-0.2 0.638 91.9 -2.5-107.4-103.2 -7.9 12.0 -7.2 71 71 A P - 0 0 92 0, 0.0 -1,-0.5 0, 0.0 2,-0.2 -0.499 44.2-160.4 -80.6 165.8 -10.9 10.8 -5.2 72 72 A S - 0 0 122 -2,-0.2 2,-2.1 -3,-0.1 -4,-0.0 -0.699 14.3-166.5-138.5 87.7 -11.8 11.6 -1.6 73 73 A S 0 0 121 1,-0.2 0, 0.0 -2,-0.2 0, 0.0 -0.490 360.0 360.0 -75.9 69.8 -14.2 8.8 -0.8 74 74 A G 0 0 122 -2,-2.1 -1,-0.2 0, 0.0 0, 0.0 0.690 360.0 360.0 -75.5 360.0 -15.7 10.2 2.5