==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 23-JUL-01 1J46 . COMPND 2 MOLECULE: SEX-DETERMINING REGION Y PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.M.CLORE,E.C.MURPHY . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8941.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 61.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 42 49.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 231 0, 0.0 2,-0.5 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 127.3 1.6 17.8 17.4 2 2 A Q - 0 0 194 0, 0.0 2,-0.5 0, 0.0 0, 0.0 -0.878 360.0-143.0-107.0 133.7 0.0 14.3 17.0 3 3 A D - 0 0 156 -2,-0.5 2,-0.3 1,-0.0 0, 0.0 -0.783 20.3-137.8 -92.3 128.3 2.1 11.1 17.2 4 4 A R - 0 0 205 -2,-0.5 2,-0.5 1,-0.0 -1,-0.0 -0.637 14.5-123.3 -87.7 145.0 0.8 8.4 14.7 5 5 A V - 0 0 35 -2,-0.3 2,-0.2 1,-0.0 -1,-0.0 -0.722 23.3-143.3 -89.4 129.8 0.5 4.8 15.9 6 6 A K - 0 0 171 -2,-0.5 3,-0.1 1,-0.1 -1,-0.0 -0.540 27.3 -95.1 -89.3 156.2 2.5 2.3 13.8 7 7 A R - 0 0 132 -2,-0.2 -1,-0.1 1,-0.1 3,-0.1 -0.373 48.9 -90.1 -69.6 151.5 1.2 -1.2 13.0 8 8 A P - 0 0 33 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.258 48.6-105.5 -57.9 141.5 2.3 -4.1 15.2 9 9 A M - 0 0 61 -3,-0.1 53,-0.1 4,-0.1 52,-0.1 -0.523 36.1-129.8 -73.6 133.5 5.5 -5.8 13.9 10 10 A N > - 0 0 107 -2,-0.2 4,-3.0 1,-0.1 5,-0.4 -0.304 31.2 -92.8 -80.1 167.4 4.7 -9.2 12.2 11 11 A A H > S+ 0 0 6 1,-0.2 4,-2.1 2,-0.2 5,-0.1 0.857 128.0 47.0 -49.7 -36.7 6.6 -12.4 13.1 12 12 A F H > S+ 0 0 59 2,-0.2 4,-2.5 3,-0.2 5,-0.3 0.934 111.5 48.4 -75.0 -43.6 9.0 -11.7 10.2 13 13 A I H > S+ 0 0 72 2,-0.2 4,-2.6 1,-0.2 -2,-0.2 0.961 116.0 44.5 -62.6 -44.9 9.6 -8.0 11.0 14 14 A V H X S+ 0 0 21 -4,-3.0 4,-1.3 1,-0.2 5,-0.3 0.968 116.5 46.6 -61.4 -49.1 10.3 -9.0 14.7 15 15 A W H X S+ 0 0 14 -4,-2.1 4,-1.7 -5,-0.4 -1,-0.2 0.812 113.9 49.3 -63.9 -27.9 12.5 -11.9 13.6 16 16 A S H X>S+ 0 0 2 -4,-2.5 4,-4.2 3,-0.2 5,-0.5 0.876 98.6 66.2 -81.2 -35.7 14.3 -9.7 11.1 17 17 A R H X5S+ 0 0 153 -4,-2.6 4,-1.1 -5,-0.3 -2,-0.2 0.950 116.7 27.4 -50.1 -50.0 15.0 -6.9 13.6 18 18 A D H X5S+ 0 0 127 -4,-1.3 4,-1.6 2,-0.2 -1,-0.2 0.879 127.1 45.8 -82.4 -36.6 17.3 -9.3 15.6 19 19 A Q H X5S+ 0 0 58 -4,-1.7 4,-2.6 -5,-0.3 5,-0.3 0.933 108.7 56.9 -71.4 -41.9 18.3 -11.4 12.6 20 20 A R H X5S+ 0 0 70 -4,-4.2 4,-1.8 1,-0.2 -1,-0.2 0.928 109.3 45.5 -55.5 -43.9 18.9 -8.4 10.4 21 21 A R H X< S+ 0 0 48 -4,-3.1 3,-1.0 -5,-0.3 -1,-0.3 -0.531 71.9 154.2-129.7 66.0 28.0 -8.9 6.8 28 28 A P T 3 S+ 0 0 96 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.556 76.4 50.0 -72.3 -6.6 28.4 -5.1 7.6 29 29 A R T 3 S+ 0 0 236 -3,-0.1 2,-0.3 2,-0.1 -5,-0.1 0.455 86.3 101.9-110.2 -1.6 29.3 -4.2 4.0 30 30 A M S < S- 0 0 52 -3,-1.0 2,-0.1 -7,-0.2 -3,-0.1 -0.616 77.7-119.7 -81.2 137.8 26.3 -6.1 2.5 31 31 A R >> - 0 0 191 -2,-0.3 4,-2.5 1,-0.1 3,-1.0 -0.483 18.0-119.6 -76.0 148.2 23.5 -3.7 1.5 32 32 A N H 3> S+ 0 0 90 1,-0.3 4,-3.0 2,-0.2 5,-0.3 0.835 112.4 67.6 -57.6 -27.5 20.1 -4.2 3.2 33 33 A S H 3> S+ 0 0 84 1,-0.2 4,-0.8 2,-0.2 -1,-0.3 0.928 109.2 34.1 -61.1 -39.8 18.7 -4.8 -0.3 34 34 A E H <> S+ 0 0 97 -3,-1.0 4,-2.2 2,-0.2 5,-0.2 0.911 118.2 51.5 -82.8 -40.8 20.7 -8.0 -0.7 35 35 A I H X S+ 0 0 1 -4,-2.5 4,-3.1 1,-0.2 5,-0.3 0.959 105.6 56.5 -60.1 -45.3 20.5 -9.0 3.0 36 36 A S H X S+ 0 0 49 -4,-3.0 4,-1.7 -5,-0.3 -1,-0.2 0.896 108.1 49.9 -53.7 -35.0 16.7 -8.6 2.9 37 37 A K H X S+ 0 0 153 -4,-0.8 4,-1.9 -5,-0.3 -1,-0.2 0.922 112.3 44.2 -71.6 -43.1 16.8 -11.1 -0.0 38 38 A Q H X S+ 0 0 89 -4,-2.2 4,-3.4 2,-0.2 5,-0.3 0.925 111.5 54.0 -70.4 -38.6 18.9 -13.7 1.8 39 39 A L H X S+ 0 0 2 -4,-3.1 4,-3.9 -5,-0.2 5,-0.3 0.940 108.6 49.6 -60.4 -42.1 16.8 -13.4 5.0 40 40 A G H X S+ 0 0 22 -4,-1.7 4,-1.9 -5,-0.3 -1,-0.2 0.928 112.2 48.3 -63.1 -39.3 13.7 -14.0 3.0 41 41 A Y H < S+ 0 0 148 -4,-1.9 4,-0.4 2,-0.2 -2,-0.2 0.948 117.2 41.3 -65.6 -45.2 15.3 -17.1 1.5 42 42 A Q H >X S+ 0 0 101 -4,-3.4 3,-1.5 1,-0.2 4,-0.6 0.915 111.6 56.5 -68.7 -41.1 16.5 -18.3 5.0 43 43 A W H >< S+ 0 0 29 -4,-3.9 3,-1.1 -5,-0.3 -1,-0.2 0.888 102.3 55.7 -59.7 -36.9 13.1 -17.3 6.6 44 44 A K T 3< S+ 0 0 175 -4,-1.9 -1,-0.3 -5,-0.3 -2,-0.2 0.666 103.4 57.3 -70.6 -13.0 11.3 -19.6 4.1 45 45 A M T <4 S+ 0 0 112 -3,-1.5 -1,-0.2 -4,-0.4 -2,-0.2 0.570 81.9 102.2 -95.0 -7.4 13.5 -22.5 5.2 46 46 A L S << S- 0 0 47 -3,-1.1 2,-0.1 -4,-0.6 -3,-0.0 -0.435 74.1-121.1 -73.0 150.9 12.5 -22.3 8.9 47 47 A T > - 0 0 73 1,-0.1 4,-2.7 -2,-0.1 5,-0.2 -0.410 21.8-110.0 -86.1 168.6 10.0 -24.9 10.1 48 48 A E H > S+ 0 0 161 2,-0.2 4,-3.3 1,-0.2 -1,-0.1 0.910 119.9 53.3 -66.7 -38.0 6.6 -24.0 11.6 49 49 A A H 4 S+ 0 0 78 2,-0.2 -1,-0.2 1,-0.2 -3,-0.0 0.948 113.7 42.6 -62.4 -43.8 7.7 -25.3 15.0 50 50 A E H 4 S+ 0 0 111 1,-0.2 4,-0.4 2,-0.2 -2,-0.2 0.893 118.9 44.7 -69.5 -36.8 10.8 -23.1 14.8 51 51 A K H >X S+ 0 0 47 -4,-2.7 4,-2.2 1,-0.2 3,-1.3 0.827 96.5 77.9 -76.1 -29.9 8.7 -20.2 13.4 52 52 A W H 3X S+ 0 0 130 -4,-3.3 4,-3.0 1,-0.3 3,-0.4 0.924 87.9 56.0 -45.6 -54.9 6.0 -20.7 16.0 53 53 A P H 3> S+ 0 0 66 0, 0.0 4,-1.2 0, 0.0 -1,-0.3 0.833 111.7 45.0 -50.8 -31.2 8.0 -19.0 18.8 54 54 A F H <> S+ 0 0 68 -3,-1.3 4,-2.0 -4,-0.4 -2,-0.2 0.831 112.1 50.9 -83.6 -31.0 8.2 -15.9 16.6 55 55 A F H X S+ 0 0 101 -4,-2.2 4,-2.8 -3,-0.4 5,-0.2 0.946 109.1 50.6 -71.3 -44.5 4.6 -16.0 15.6 56 56 A Q H X S+ 0 0 92 -4,-3.0 4,-2.8 -5,-0.2 5,-0.2 0.930 110.2 50.4 -59.4 -41.9 3.4 -16.2 19.2 57 57 A E H X S+ 0 0 101 -4,-1.2 4,-3.4 -5,-0.3 5,-0.3 0.952 110.6 48.2 -63.7 -43.8 5.6 -13.2 20.1 58 58 A A H X S+ 0 0 13 -4,-2.0 4,-2.4 1,-0.2 -1,-0.2 0.927 112.1 51.3 -61.4 -38.3 4.1 -11.2 17.2 59 59 A Q H X S+ 0 0 117 -4,-2.8 4,-2.4 2,-0.2 -2,-0.2 0.923 111.6 46.3 -64.3 -40.9 0.7 -12.3 18.4 60 60 A K H X S+ 0 0 137 -4,-2.8 4,-3.3 2,-0.2 5,-0.3 0.934 111.9 50.4 -68.3 -42.1 1.6 -11.1 21.9 61 61 A L H X S+ 0 0 45 -4,-3.4 4,-2.6 1,-0.2 -2,-0.2 0.895 111.2 50.6 -62.7 -35.7 3.0 -7.8 20.6 62 62 A Q H X S+ 0 0 114 -4,-2.4 4,-2.1 -5,-0.3 -2,-0.2 0.930 113.4 43.5 -69.6 -42.0 -0.3 -7.5 18.7 63 63 A A H X S+ 0 0 60 -4,-2.4 4,-1.5 2,-0.2 -2,-0.2 0.948 117.9 44.9 -68.8 -44.6 -2.4 -8.1 21.8 64 64 A M H X S+ 0 0 104 -4,-3.3 4,-1.7 1,-0.2 -2,-0.2 0.920 112.4 52.5 -66.0 -37.9 -0.2 -5.9 23.9 65 65 A H H X S+ 0 0 43 -4,-2.6 4,-2.0 -5,-0.3 -1,-0.2 0.920 108.2 51.7 -62.6 -39.2 -0.3 -3.3 21.1 66 66 A R H < S+ 0 0 184 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.814 104.4 57.4 -67.8 -27.5 -4.1 -3.5 21.2 67 67 A E H < S+ 0 0 154 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.896 106.3 48.3 -72.3 -35.0 -4.1 -2.9 24.9 68 68 A K H < S+ 0 0 146 -4,-1.7 -2,-0.2 1,-0.3 -1,-0.2 0.935 131.4 19.3 -70.0 -42.5 -2.2 0.4 24.5 69 69 A Y >< + 0 0 89 -4,-2.0 3,-1.8 -5,-0.2 -1,-0.3 -0.658 68.5 170.2-128.7 78.4 -4.7 1.5 21.8 70 70 A P T 3 S+ 0 0 101 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.665 83.3 48.5 -61.7 -16.4 -7.9 -0.6 22.0 71 71 A N T 3 S+ 0 0 149 -3,-0.1 -5,-0.1 2,-0.0 2,-0.0 0.343 81.7 127.6-106.7 6.6 -9.6 1.7 19.5 72 72 A Y < - 0 0 78 -3,-1.8 2,-0.4 -6,-0.2 -3,-0.0 -0.353 38.3-169.4 -63.9 141.5 -6.8 1.6 16.9 73 73 A K - 0 0 148 2,-0.0 2,-0.6 -2,-0.0 -2,-0.0 -0.994 26.1-121.0-133.9 139.5 -7.8 0.7 13.4 74 74 A Y + 0 0 114 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.654 37.1 172.4 -78.7 117.4 -5.7 -0.1 10.3 75 75 A R - 0 0 181 -2,-0.6 -1,-0.1 2,-0.0 -2,-0.0 -0.748 13.1-163.2-130.2 85.5 -6.7 2.5 7.7 76 76 A P - 0 0 72 0, 0.0 2,-0.6 0, 0.0 -2,-0.0 -0.295 23.9-113.2 -67.7 151.7 -4.5 2.3 4.6 77 77 A R - 0 0 237 -2,-0.0 2,-0.3 1,-0.0 -2,-0.0 -0.742 27.7-142.2 -89.2 125.3 -4.4 5.2 2.1 78 78 A R - 0 0 195 -2,-0.6 2,-0.1 1,-0.0 3,-0.0 -0.658 11.2-140.3 -86.4 139.9 -5.8 4.3 -1.3 79 79 A K - 0 0 182 -2,-0.3 2,-0.7 1,-0.1 -1,-0.0 -0.489 40.7 -78.9 -92.7 164.6 -4.1 5.7 -4.4 80 80 A A + 0 0 113 -2,-0.1 2,-0.4 2,-0.0 -1,-0.1 -0.502 68.4 159.4 -67.2 110.2 -6.1 6.9 -7.4 81 81 A K + 0 0 151 -2,-0.7 2,-0.4 2,-0.0 -1,-0.0 -0.963 16.2 171.7-139.2 122.8 -7.0 3.7 -9.2 82 82 A M - 0 0 182 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.954 16.9-155.0-132.4 115.0 -9.8 3.1 -11.7 83 83 A L - 0 0 121 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.705 26.6-109.6 -90.9 141.5 -10.1 -0.2 -13.6 84 84 A P 0 0 124 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.231 360.0 360.0 -64.3 153.9 -11.9 -0.3 -17.0 85 85 A K 0 0 267 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.581 360.0 360.0-132.2 360.0 -15.3 -2.0 -17.2