==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 23-JUL-01 1J47 . COMPND 2 MOLECULE: SEX-DETERMINING REGION Y PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.M.CLORE,E.C.MURPHY . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9001.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 62.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 42 49.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 238 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 131.3 0.1 18.1 18.3 2 2 A Q - 0 0 190 2,-0.0 2,-0.7 0, 0.0 0, 0.0 -0.888 360.0-144.4-109.2 136.6 -1.4 14.7 17.4 3 3 A D - 0 0 156 -2,-0.4 2,-0.3 2,-0.0 0, 0.0 -0.846 17.7-151.4 -98.5 117.5 0.4 11.4 18.1 4 4 A R - 0 0 224 -2,-0.7 2,-0.5 1,-0.0 -2,-0.0 -0.633 12.2-127.6 -89.4 146.5 -0.4 8.9 15.3 5 5 A V - 0 0 25 -2,-0.3 2,-0.3 64,-0.0 -1,-0.0 -0.787 16.8-142.8 -96.3 131.6 -0.3 5.2 16.1 6 6 A K - 0 0 178 -2,-0.5 3,-0.1 1,-0.1 0, 0.0 -0.678 27.4-103.5 -92.3 145.4 1.8 2.8 14.0 7 7 A R - 0 0 124 -2,-0.3 -1,-0.1 1,-0.1 55,-0.0 -0.356 43.1 -97.1 -65.2 147.4 0.5 -0.7 13.1 8 8 A P - 0 0 45 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.306 41.7-116.8 -62.0 142.0 2.0 -3.6 15.1 9 9 A I - 0 0 61 1,-0.1 53,-0.1 -3,-0.1 52,-0.1 -0.570 28.8-122.8 -85.1 145.6 4.9 -5.3 13.1 10 10 A N > - 0 0 118 -2,-0.2 4,-1.8 1,-0.1 3,-0.4 -0.131 35.7 -84.5 -81.0-179.5 4.4 -9.0 12.1 11 11 A A H > S+ 0 0 10 1,-0.2 4,-1.1 2,-0.2 5,-0.1 0.639 122.6 61.4 -61.1 -14.9 6.6 -12.0 12.9 12 12 A F H > S+ 0 0 72 2,-0.2 4,-2.9 3,-0.1 -1,-0.2 0.916 106.1 41.2 -82.7 -42.8 8.9 -11.3 10.0 13 13 A I H > S+ 0 0 69 -3,-0.4 4,-4.1 2,-0.2 5,-0.3 0.959 113.0 54.1 -69.7 -45.7 10.1 -7.8 11.1 14 14 A V H X S+ 0 0 20 -4,-1.8 4,-1.3 1,-0.2 5,-0.2 0.964 116.7 39.4 -50.4 -51.4 10.5 -9.0 14.8 15 15 A W H X S+ 0 0 20 -4,-1.1 4,-2.8 -5,-0.2 5,-0.3 0.915 118.3 48.8 -64.1 -44.3 12.7 -11.8 13.5 16 16 A S H X S+ 0 0 1 -4,-2.9 4,-3.4 2,-0.2 5,-0.3 0.849 102.8 59.7 -70.7 -31.5 14.4 -9.6 10.9 17 17 A R H X S+ 0 0 157 -4,-4.1 4,-1.2 2,-0.2 -1,-0.2 0.947 116.9 34.2 -63.6 -39.7 15.2 -6.7 13.3 18 18 A D H X S+ 0 0 125 -4,-1.3 4,-1.5 -5,-0.3 -2,-0.2 0.915 125.0 42.4 -77.8 -44.2 17.2 -9.2 15.4 19 19 A Q H X S+ 0 0 53 -4,-2.8 4,-2.3 -5,-0.2 5,-0.2 0.847 109.7 59.4 -72.2 -32.1 18.5 -11.3 12.5 20 20 A R H X S+ 0 0 65 -4,-3.4 4,-1.7 -5,-0.3 -1,-0.2 0.945 105.1 48.1 -63.5 -45.9 19.2 -8.1 10.4 21 21 A R H X S+ 0 0 168 -4,-1.2 4,-2.5 -5,-0.3 5,-0.2 0.945 112.0 49.5 -61.6 -45.3 21.6 -6.7 12.9 22 22 A K H X S+ 0 0 107 -4,-1.5 4,-2.7 1,-0.2 5,-0.4 0.919 109.9 50.9 -61.6 -40.5 23.5 -10.1 13.2 23 23 A M H X S+ 0 0 31 -4,-2.3 4,-1.6 1,-0.2 -1,-0.2 0.840 111.9 48.7 -67.4 -27.4 23.7 -10.3 9.4 24 24 A A H < S+ 0 0 35 -4,-1.7 -2,-0.2 -5,-0.2 -1,-0.2 0.863 112.2 47.2 -80.3 -33.5 25.1 -6.7 9.4 25 25 A L H < S+ 0 0 115 -4,-2.5 -2,-0.2 -5,-0.2 -3,-0.2 0.906 123.1 34.6 -73.1 -38.5 27.7 -7.6 12.1 26 26 A E H < S+ 0 0 125 -4,-2.7 -2,-0.2 1,-0.2 -3,-0.2 0.770 132.0 33.8 -86.0 -24.9 28.7 -10.8 10.3 27 27 A N >< + 0 0 48 -4,-1.6 3,-1.3 -5,-0.4 -1,-0.2 -0.528 66.0 159.2-127.9 67.1 28.3 -9.2 6.9 28 28 A P T 3 S+ 0 0 102 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.590 78.8 53.2 -65.4 -8.2 29.2 -5.5 7.3 29 29 A R T 3 S+ 0 0 237 -3,-0.1 2,-0.3 2,-0.1 -5,-0.1 0.585 87.7 96.1-101.1 -14.7 29.8 -5.4 3.5 30 30 A M S < S- 0 0 54 -3,-1.3 2,-0.1 -7,-0.2 -3,-0.1 -0.600 73.3-131.1 -80.5 134.7 26.3 -6.7 2.6 31 31 A R >> - 0 0 188 -2,-0.3 4,-2.6 1,-0.1 3,-0.6 -0.459 20.5-113.7 -81.8 155.1 23.7 -4.1 1.8 32 32 A N H 3> S+ 0 0 90 1,-0.2 4,-3.1 2,-0.2 5,-0.2 0.876 115.5 58.7 -57.3 -37.4 20.2 -4.3 3.4 33 33 A S H 3> S+ 0 0 89 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.879 110.5 42.1 -65.0 -30.8 18.6 -5.0 0.1 34 34 A E H <> S+ 0 0 99 -3,-0.6 4,-2.1 2,-0.2 -2,-0.2 0.900 114.0 51.7 -80.9 -38.0 20.7 -8.1 -0.4 35 35 A I H X S+ 0 0 0 -4,-2.6 4,-3.5 1,-0.2 5,-0.3 0.946 105.7 55.4 -61.8 -44.7 20.2 -9.1 3.2 36 36 A S H X S+ 0 0 49 -4,-3.1 4,-2.4 1,-0.2 5,-0.2 0.931 108.1 49.5 -54.0 -43.6 16.5 -8.8 2.9 37 37 A K H X S+ 0 0 162 -4,-1.2 4,-1.6 -5,-0.2 -1,-0.2 0.910 113.7 44.8 -63.9 -40.7 16.7 -11.2 -0.1 38 38 A Q H X S+ 0 0 87 -4,-2.1 4,-2.9 2,-0.2 5,-0.3 0.906 111.4 53.3 -71.7 -38.9 18.7 -13.7 2.0 39 39 A L H X S+ 0 0 0 -4,-3.5 4,-3.4 2,-0.2 5,-0.3 0.943 108.0 49.9 -62.8 -43.3 16.5 -13.3 5.0 40 40 A G H X S+ 0 0 17 -4,-2.4 4,-1.9 -5,-0.3 -1,-0.2 0.930 112.2 49.5 -60.9 -40.3 13.4 -14.1 2.9 41 41 A Y H < S+ 0 0 135 -4,-1.6 4,-0.4 -5,-0.2 -2,-0.2 0.950 116.1 41.0 -64.1 -47.3 15.2 -17.2 1.6 42 42 A Q H >< S+ 0 0 94 -4,-2.9 3,-1.1 1,-0.2 4,-0.5 0.897 111.8 56.4 -68.5 -39.3 16.2 -18.3 5.1 43 43 A W H >< S+ 0 0 31 -4,-3.4 3,-1.0 -5,-0.3 -1,-0.2 0.883 104.0 52.8 -63.7 -34.4 12.8 -17.5 6.6 44 44 A K T 3< S+ 0 0 171 -4,-1.9 -1,-0.3 -5,-0.3 -2,-0.2 0.651 105.1 58.1 -75.2 -9.8 11.1 -19.7 4.1 45 45 A M T < S+ 0 0 111 -3,-1.1 -1,-0.2 -4,-0.4 -2,-0.2 0.537 83.9 102.9 -95.0 -6.0 13.5 -22.5 5.2 46 46 A L S < S- 0 0 49 -3,-1.0 2,-0.1 -4,-0.5 -3,-0.0 -0.521 73.2-124.4 -77.4 141.9 12.3 -22.3 8.8 47 47 A T > - 0 0 76 -2,-0.2 4,-3.1 1,-0.1 5,-0.3 -0.433 22.4-109.1 -83.5 160.8 9.9 -25.0 10.0 48 48 A E H > S+ 0 0 165 1,-0.2 4,-2.7 2,-0.2 -1,-0.1 0.923 122.6 50.6 -56.4 -41.6 6.5 -24.3 11.5 49 49 A A H 4 S+ 0 0 76 2,-0.2 -1,-0.2 1,-0.2 -3,-0.0 0.912 112.6 46.3 -64.0 -39.2 7.8 -25.5 14.9 50 50 A E H > S+ 0 0 117 1,-0.2 4,-0.5 2,-0.2 -2,-0.2 0.900 118.4 41.8 -70.3 -38.8 10.8 -23.1 14.5 51 51 A K H X S+ 0 0 41 -4,-3.1 4,-2.2 1,-0.2 3,-0.5 0.781 95.3 81.5 -79.6 -25.8 8.6 -20.3 13.4 52 52 A W H >X S+ 0 0 137 -4,-2.7 4,-3.0 -5,-0.3 3,-0.8 0.938 90.8 50.7 -46.2 -56.2 5.9 -21.0 16.0 53 53 A P H 3> S+ 0 0 64 0, 0.0 4,-2.2 0, 0.0 -1,-0.2 0.893 111.5 48.6 -50.7 -39.8 7.8 -19.1 18.8 54 54 A F H 3X S+ 0 0 62 -4,-0.5 4,-1.6 -3,-0.5 -2,-0.2 0.822 111.6 50.3 -72.8 -25.1 8.2 -16.1 16.4 55 55 A F H < + 0 0 89 -4,-2.4 3,-1.5 -5,-0.1 -1,-0.3 -0.655 69.4 167.1-132.9 78.3 -5.5 1.0 21.5 70 70 A P T 3 S+ 0 0 98 0, 0.0 -1,-0.1 0, 0.0 -3,-0.1 0.700 81.3 49.1 -64.7 -20.9 -8.3 -1.7 21.9 71 71 A N T 3 S+ 0 0 155 -5,-0.1 2,-0.1 2,-0.0 -5,-0.1 0.221 84.1 127.7-104.5 15.2 -10.6 0.2 19.5 72 72 A Y < - 0 0 92 -3,-1.5 2,-0.4 -6,-0.2 -3,-0.0 -0.381 39.5-164.7 -70.4 151.1 -8.0 0.7 16.8 73 73 A K - 0 0 151 -2,-0.1 2,-0.7 2,-0.0 -2,-0.0 -0.998 22.3-123.9-136.9 138.2 -8.9 -0.3 13.2 74 74 A Y + 0 0 113 -2,-0.4 -2,-0.0 1,-0.0 0, 0.0 -0.680 31.7 179.9 -81.3 117.2 -6.5 -0.9 10.3 75 75 A R - 0 0 203 -2,-0.7 2,-0.1 2,-0.0 -1,-0.0 -0.828 8.9-163.6-122.6 93.5 -7.7 1.4 7.5 76 76 A P - 0 0 67 0, 0.0 2,-0.9 0, 0.0 -2,-0.0 -0.398 26.6-110.9 -76.0 151.5 -5.6 1.1 4.4 77 77 A R - 0 0 239 -2,-0.1 2,-0.1 0, 0.0 -2,-0.0 -0.701 36.8-158.2 -83.9 106.5 -5.6 3.7 1.6 78 78 A R - 0 0 173 -2,-0.9 2,-0.2 1,-0.1 3,-0.0 -0.496 21.1-108.1 -83.7 155.0 -7.2 1.9 -1.4 79 79 A K - 0 0 169 -2,-0.1 2,-0.6 1,-0.1 -1,-0.1 -0.582 48.6 -84.0 -82.7 143.8 -6.6 3.2 -5.0 80 80 A A + 0 0 119 -2,-0.2 2,-0.6 1,-0.1 -1,-0.1 -0.195 66.2 175.8 -46.2 93.5 -9.5 5.0 -6.7 81 81 A K + 0 0 131 -2,-0.6 2,-0.4 2,-0.0 -1,-0.1 -0.889 15.4 155.0-114.6 110.3 -11.0 1.6 -7.9 82 82 A M - 0 0 183 -2,-0.6 -2,-0.0 2,-0.0 0, 0.0 -0.900 21.2-165.3-132.7 102.4 -14.4 1.7 -9.7 83 83 A L - 0 0 126 -2,-0.4 2,-0.1 1,-0.0 -2,-0.0 -0.778 14.9-134.2 -93.7 130.7 -15.0 -1.2 -12.0 84 84 A P 0 0 124 0, 0.0 -1,-0.0 0, 0.0 -2,-0.0 -0.418 360.0 360.0 -76.8 152.7 -17.9 -1.0 -14.6 85 85 A K 0 0 256 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.692 360.0 360.0-128.2 360.0 -20.3 -3.9 -15.0