==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 02-APR-02 1J5C . COMPND 2 MOLECULE: PLASTOCYANIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. PCC 6803; . AUTHOR I.BERTINI,S.CIURLI,A.DIKIY,C.O.FERNANDEZ,C.LUCHINAT, . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5746.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 53.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 10 10.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 14.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 12.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 3 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 73 0, 0.0 27,-0.4 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 100.0 4.8 -8.4 13.8 2 2 A N - 0 0 124 25,-0.1 2,-0.3 21,-0.1 27,-0.2 -0.877 360.0-140.6-142.6 172.5 3.2 -6.2 11.2 3 3 A A E -a 29 0A 9 25,-1.1 27,-1.8 -2,-0.3 2,-0.3 -0.999 14.8-177.0-142.8 138.6 4.1 -3.8 8.4 4 4 A T E -a 30 0A 64 -2,-0.3 2,-0.4 25,-0.2 27,-0.2 -0.982 6.1-168.8-137.4 147.5 2.6 -0.5 7.2 5 5 A V - 0 0 0 25,-2.2 27,-0.5 -2,-0.3 2,-0.4 -0.980 20.0-134.1-140.7 123.9 3.4 1.9 4.4 6 6 A K B -C 17 0B 130 11,-1.3 2,-2.4 -2,-0.4 11,-1.1 -0.623 26.0-120.4 -78.9 129.7 2.0 5.4 4.0 7 7 A M B S-d 33 0C 0 25,-3.8 28,-1.9 -2,-0.4 27,-0.8 -0.455 84.1 -19.3 -71.0 77.6 0.7 6.1 0.5 8 8 A G S S- 0 0 6 -2,-2.4 2,-0.2 26,-0.2 9,-0.2 -0.354 86.8 -73.4 109.8 169.2 3.1 9.0 -0.1 9 9 A S - 0 0 54 4,-0.6 4,-0.4 -2,-0.1 27,-0.0 -0.627 32.1-121.0-100.6 160.7 5.2 11.3 2.0 10 10 A D S S+ 0 0 149 -2,-0.2 -1,-0.1 1,-0.2 0, 0.0 0.979 112.0 55.2 -61.7 -59.1 4.1 14.2 4.1 11 11 A S S S- 0 0 129 1,-0.1 -1,-0.2 -3,-0.0 -3,-0.0 0.874 132.9 -86.2 -39.5 -50.6 6.1 16.8 2.3 12 12 A G S S+ 0 0 47 23,-0.0 2,-0.2 24,-0.0 -2,-0.2 0.498 71.6 153.7 136.9 59.0 4.3 15.7 -0.9 13 13 A A - 0 0 34 -4,-0.4 -4,-0.6 1,-0.1 22,-0.1 -0.647 34.1-152.0-106.7 165.0 6.1 12.8 -2.5 14 14 A L + 0 0 55 -2,-0.2 -1,-0.1 -6,-0.2 21,-0.1 0.869 69.3 85.4 -98.2 -63.0 4.7 10.1 -4.8 15 15 A V S S- 0 0 64 1,-0.1 2,-0.2 74,-0.1 78,-0.1 -0.007 84.8-112.0 -40.5 144.8 6.9 7.1 -4.3 16 16 A F - 0 0 2 76,-0.6 -9,-0.1 -9,-0.1 3,-0.1 -0.571 37.0-109.6 -86.5 149.1 5.7 5.0 -1.3 17 17 A E B S+C 6 0B 118 -11,-1.1 -11,-1.3 1,-0.3 -9,-0.1 -0.998 97.5 28.6-142.2 143.1 7.8 4.7 1.9 18 18 A P S S- 0 0 58 0, 0.0 -1,-0.3 0, 0.0 76,-0.1 0.354 79.1-156.7 -75.1 134.3 9.3 2.8 3.2 19 19 A S S S+ 0 0 36 -3,-0.1 75,-1.6 74,-0.1 2,-0.4 0.870 83.6 33.1 -38.4 -51.2 9.8 1.5 -0.3 20 20 A T E S-e 94 0D 72 73,-0.2 2,-0.4 75,-0.0 75,-0.2 -0.918 72.4-177.2-114.9 138.2 10.6 -1.9 1.3 21 21 A V E -e 95 0D 12 73,-0.7 75,-1.5 -2,-0.4 2,-0.2 -0.999 25.6-121.7-136.5 136.3 9.0 -3.3 4.4 22 22 A T E +e 96 0D 108 -2,-0.4 2,-0.3 73,-0.2 75,-0.2 -0.547 36.0 174.6 -77.6 138.7 9.6 -6.5 6.3 23 23 A I E -e 97 0D 5 73,-2.2 75,-2.0 -2,-0.2 2,-0.3 -0.936 25.4-122.0-141.2 161.8 6.7 -8.9 6.7 24 24 A K > - 0 0 114 -2,-0.3 3,-1.8 73,-0.3 2,-1.4 -0.779 37.0 -98.6-107.0 151.4 6.1 -12.3 8.1 25 25 A A T 3 S+ 0 0 50 73,-0.9 49,-0.2 -2,-0.3 3,-0.1 -0.535 118.1 17.1 -70.3 93.5 4.6 -15.3 6.2 26 26 A G T 3 S+ 0 0 39 47,-2.5 -1,-0.3 -2,-1.4 48,-0.2 0.108 101.5 114.2 129.6 -17.7 1.0 -15.0 7.4 27 27 A E < - 0 0 68 -3,-1.8 46,-1.5 46,-0.4 -1,-0.4 -0.125 58.6-124.4 -74.7 176.3 1.1 -11.5 8.8 28 28 A E E - B 0 72A 102 -27,-0.4 -25,-1.1 44,-0.2 2,-0.3 -0.811 13.0-144.0-122.9 163.7 -0.9 -8.5 7.4 29 29 A V E -aB 3 71A 2 42,-2.0 42,-1.4 -2,-0.3 2,-0.4 -0.859 3.4-149.3-125.7 160.4 0.0 -5.1 6.1 30 30 A K E -aB 4 70A 109 -27,-1.8 -25,-2.2 -2,-0.3 2,-0.8 -0.990 1.6-162.8-135.6 124.4 -1.6 -1.7 6.3 31 31 A W E - B 0 69A 1 38,-1.4 38,-0.9 -2,-0.4 2,-0.3 -0.881 14.9-159.6-109.6 99.5 -1.4 1.0 3.7 32 32 A V - 0 0 46 -2,-0.8 -25,-3.8 -27,-0.5 2,-0.6 -0.587 21.7-117.4 -80.3 138.7 -2.5 4.3 5.2 33 33 A N B +d 7 0C 6 -2,-0.3 -25,-0.1 -27,-0.2 3,-0.1 -0.667 41.0 164.0 -79.8 120.3 -3.5 7.0 2.8 34 34 A N - 0 0 36 -27,-0.8 2,-0.3 -2,-0.6 -26,-0.2 0.856 54.1 -72.8 -99.0 -57.4 -1.2 10.0 3.1 35 35 A K S S+ 0 0 134 -28,-1.9 -1,-0.4 1,-0.2 27,-0.1 -0.932 82.6 103.6-177.4-164.7 -1.9 12.0 -0.1 36 36 A L S S- 0 0 41 -2,-0.3 -1,-0.2 1,-0.2 -2,-0.1 0.999 71.4-135.9 65.6 70.3 -1.4 12.1 -3.8 37 37 A S + 0 0 60 -3,-0.1 2,-0.2 26,-0.1 -1,-0.2 -0.826 67.5 38.1-123.8 162.7 -4.9 11.1 -4.9 38 38 A P S S+ 0 0 69 0, 0.0 2,-0.3 0, 0.0 25,-0.1 0.609 86.4 119.9 -75.0 168.9 -6.6 9.6 -6.5 39 39 A H B -H 62 0E 1 23,-0.7 23,-1.8 -2,-0.2 2,-0.3 -0.951 35.4-161.0-178.7 166.5 -4.5 6.5 -6.5 40 40 A N - 0 0 16 -2,-0.3 2,-0.6 21,-0.2 19,-0.1 -0.908 27.7-108.7-152.0 175.4 -4.4 2.8 -5.6 41 41 A I - 0 0 1 17,-0.3 17,-3.0 -2,-0.3 2,-0.5 -0.876 33.9-174.0-118.8 96.5 -2.0 -0.1 -4.9 42 42 A V - 0 0 11 -2,-0.6 40,-1.9 40,-0.4 2,-0.4 -0.779 9.1-153.9 -93.6 131.3 -2.1 -2.6 -7.7 43 43 A F E -F 81 0D 10 -2,-0.5 38,-0.3 38,-0.3 2,-0.3 -0.875 4.8-143.5-108.5 137.4 -0.1 -5.8 -7.2 44 44 A A E -F 80 0D 40 36,-2.1 2,-0.7 -2,-0.4 36,-0.6 -0.664 8.9-137.3 -97.1 153.1 1.3 -7.9 -10.1 45 45 A A + 0 0 46 -2,-0.3 5,-0.1 1,-0.1 34,-0.1 -0.724 56.8 124.8-111.4 79.1 1.5 -11.7 -10.0 46 46 A D S S+ 0 0 161 -2,-0.7 -1,-0.1 3,-0.1 33,-0.1 0.876 87.0 13.1 -96.0 -73.1 5.0 -12.4 -11.5 47 47 A G S S+ 0 0 70 31,-0.3 2,-0.3 -3,-0.1 31,-0.1 0.189 128.2 64.7 -90.7 15.3 6.9 -14.5 -9.0 48 48 A V S S- 0 0 17 1,-0.1 3,-0.0 29,-0.1 31,-0.0 -0.860 96.4 -80.9-133.0 166.6 3.6 -15.2 -7.1 49 49 A D > - 0 0 84 -2,-0.3 4,-2.1 1,-0.1 5,-0.1 -0.217 34.7-128.6 -64.4 157.8 0.3 -16.9 -7.8 50 50 A A H > S+ 0 0 72 2,-0.2 4,-3.2 3,-0.2 5,-0.1 0.995 106.4 43.4 -70.6 -70.0 -2.3 -15.0 -9.8 51 51 A D H > S+ 0 0 142 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.887 116.7 51.9 -40.8 -51.2 -5.3 -15.4 -7.5 52 52 A T H > S+ 0 0 43 1,-0.2 4,-1.9 2,-0.2 3,-0.5 0.969 109.2 45.8 -50.4 -67.7 -3.0 -14.7 -4.6 53 53 A A H X S+ 0 0 2 -4,-2.1 4,-2.4 1,-0.2 -1,-0.2 0.869 104.8 67.7 -43.4 -44.2 -1.6 -11.5 -6.1 54 54 A A H >< S+ 0 0 50 -4,-3.2 3,-1.3 2,-0.2 -1,-0.2 0.924 103.2 41.1 -40.3 -67.5 -5.2 -10.6 -6.9 55 55 A K H 3< S+ 0 0 187 -4,-1.7 -1,-0.2 -3,-0.5 -2,-0.2 0.930 114.5 51.7 -47.1 -55.2 -6.1 -10.2 -3.3 56 56 A L H 3< S+ 0 0 4 -4,-1.9 2,-0.5 -5,-0.1 -1,-0.3 0.771 96.3 90.3 -53.7 -26.0 -2.8 -8.5 -2.6 57 57 A S S << S- 0 0 14 -4,-2.4 2,-1.0 -3,-1.3 -15,-0.2 -0.636 75.1-146.3 -78.1 122.7 -3.9 -6.3 -5.5 58 58 A H + 0 0 15 -17,-3.0 -17,-0.3 -2,-0.5 -3,-0.1 -0.793 23.1 173.1 -93.9 100.6 -5.9 -3.3 -4.3 59 59 A K + 0 0 166 -2,-1.0 -1,-0.1 -4,-0.1 -17,-0.1 -0.150 53.0 94.1 -97.4 36.4 -8.5 -2.6 -7.0 60 60 A G S S- 0 0 36 -19,-0.1 2,-0.2 -21,-0.0 -2,-0.0 0.268 74.7-115.2 -98.6-136.7 -10.1 0.1 -4.9 61 61 A L - 0 0 61 -23,-0.0 2,-0.5 -21,-0.0 -21,-0.2 -0.603 15.7-157.9-175.4 107.4 -9.6 3.8 -4.7 62 62 A A B +H 39 0E 0 -23,-1.8 -23,-0.7 -2,-0.2 3,-0.1 -0.811 29.5 146.0 -95.8 128.5 -8.2 5.8 -1.8 63 63 A F + 0 0 117 -2,-0.5 2,-0.2 1,-0.2 -1,-0.2 0.657 55.9 58.8-123.1 -55.6 -9.1 9.5 -1.7 64 64 A A S > S- 0 0 67 1,-0.1 2,-1.8 -29,-0.0 3,-0.6 -0.506 87.1-113.9 -81.7 151.0 -9.5 10.6 1.9 65 65 A A T 3 S+ 0 0 76 1,-0.2 3,-0.1 -2,-0.2 -1,-0.1 -0.568 104.4 55.7 -85.6 74.7 -6.6 10.2 4.4 66 66 A G T 3 S+ 0 0 54 -2,-1.8 2,-0.8 1,-0.2 -1,-0.2 0.236 74.3 92.0-165.7 -42.3 -8.3 7.7 6.6 67 67 A E < + 0 0 133 -3,-0.6 2,-0.4 -35,-0.1 -1,-0.2 -0.620 53.7 177.8 -75.2 108.0 -9.4 4.7 4.5 68 68 A S - 0 0 39 -2,-0.8 -36,-0.2 -36,-0.1 2,-0.0 -0.954 15.8-145.4-117.5 131.8 -6.5 2.2 4.7 69 69 A F E -B 31 0A 45 -38,-0.9 -38,-1.4 -2,-0.4 2,-0.3 -0.190 10.8-140.5 -83.7 179.3 -6.5 -1.2 3.1 70 70 A T E -B 30 0A 72 -40,-0.2 2,-0.3 -2,-0.0 -40,-0.2 -0.986 12.5-169.6-144.4 151.4 -4.9 -4.4 4.3 71 71 A S E -B 29 0A 6 -42,-1.4 -42,-2.0 -2,-0.3 2,-0.4 -0.889 11.4-144.7-136.9 166.3 -3.1 -7.3 2.8 72 72 A T E -B 28 0A 60 -2,-0.3 2,-0.9 -44,-0.2 -44,-0.2 -0.976 3.8-155.7-140.0 122.3 -1.8 -10.8 3.8 73 73 A F + 0 0 0 -46,-1.5 -47,-2.5 -2,-0.4 -46,-0.4 -0.827 25.2 159.2-100.9 98.9 1.3 -12.5 2.7 74 74 A T + 0 0 101 -2,-0.9 -1,-0.2 -49,-0.2 -47,-0.1 0.946 61.0 62.3 -80.6 -55.7 0.9 -16.2 3.0 75 75 A E S S- 0 0 89 1,-0.1 2,-1.7 -50,-0.1 -49,-0.1 -0.584 90.5-121.0 -77.2 131.6 3.6 -17.4 0.7 76 76 A P S S+ 0 0 82 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 -0.552 74.4 99.4 -75.0 86.4 7.2 -16.3 1.6 77 77 A G S S- 0 0 21 -2,-1.7 20,-2.0 21,-0.0 2,-0.3 -0.402 77.3 -81.7-139.2-144.7 8.1 -14.4 -1.5 78 78 A T - 0 0 69 18,-0.2 -31,-0.3 -2,-0.2 2,-0.2 -0.848 35.5-162.0-143.4 102.1 8.3 -10.8 -2.7 79 79 A Y - 0 0 1 -2,-0.3 16,-2.4 -33,-0.1 2,-0.3 -0.555 8.1-163.8 -84.3 148.1 5.1 -9.0 -3.9 80 80 A T E -FG 44 94D 68 -36,-0.6 -36,-2.1 -2,-0.2 2,-0.3 -0.940 7.5-177.6-132.3 153.6 5.3 -5.9 -6.0 81 81 A Y E -F 43 0D 4 12,-1.0 2,-0.3 -2,-0.3 12,-0.3 -0.976 6.7-165.7-148.2 158.2 2.9 -3.2 -7.0 82 82 A Y - 0 0 112 -40,-1.9 2,-0.5 -2,-0.3 -40,-0.4 -0.985 30.0-113.1-150.6 136.6 2.7 -0.0 -9.1 83 83 A C - 0 0 6 -2,-0.3 7,-0.1 1,-0.2 8,-0.1 -0.574 28.5-175.7 -71.2 116.8 0.3 2.9 -9.3 84 84 A E S S+ 0 0 123 -2,-0.5 -1,-0.2 6,-0.1 6,-0.1 0.938 79.1 25.5 -77.6 -51.7 -1.4 2.6 -12.7 85 85 A P S S+ 0 0 72 0, 0.0 3,-0.3 0, 0.0 5,-0.2 0.950 83.7 121.0 -75.0 -88.8 -3.4 5.8 -12.5 86 86 A H - 0 0 22 1,-0.2 -47,-0.1 -48,-0.1 -49,-0.1 0.005 67.5-110.6 52.1-164.6 -1.8 8.3 -10.2 87 87 A R S S+ 0 0 232 3,-0.1 -1,-0.2 -51,-0.1 2,-0.1 -0.209 88.5 33.7-160.9 55.2 -0.7 11.7 -11.6 88 88 A G S S- 0 0 58 -3,-0.3 2,-0.1 -74,-0.0 3,-0.1 -0.258 115.8 -32.5-164.3-102.1 3.1 11.8 -11.7 89 89 A A S S- 0 0 85 1,-0.6 -74,-0.1 -2,-0.1 -3,-0.1 -0.566 78.5-100.8-145.7 74.2 5.5 9.1 -12.4 90 90 A G - 0 0 33 -5,-0.2 -1,-0.6 -6,-0.1 2,-0.3 0.104 50.0 -95.5 39.0-155.8 4.3 5.8 -11.1 91 91 A M - 0 0 15 -8,-0.1 2,-0.5 -3,-0.1 -8,-0.1 -0.990 18.3-137.2-155.0 153.5 5.7 4.6 -7.8 92 92 A V + 0 0 91 -2,-0.3 -76,-0.6 -76,-0.1 2,-0.2 -0.964 46.8 110.2-118.8 130.2 8.5 2.4 -6.5 93 93 A G + 0 0 13 -2,-0.5 -12,-1.0 -12,-0.3 2,-0.3 -0.688 27.8 179.8 167.6 138.4 8.0 0.0 -3.6 94 94 A K E -eG 20 80D 100 -75,-1.6 -73,-0.7 -2,-0.2 2,-0.3 -0.878 19.7-125.1-142.8 172.6 7.8 -3.7 -2.8 95 95 A V E -e 21 0D 0 -16,-2.4 2,-0.3 -2,-0.3 -73,-0.2 -0.781 13.3-156.5-120.5 164.7 7.3 -6.0 0.1 96 96 A V E -e 22 0D 48 -75,-1.5 -73,-2.2 -2,-0.3 2,-0.3 -0.990 5.4-150.1-146.0 133.7 9.3 -8.9 1.5 97 97 A V E e 23 0D 14 -20,-2.0 -73,-0.3 -2,-0.3 -75,-0.0 -0.785 360.0 360.0-104.7 147.9 8.2 -11.9 3.7 98 98 A D 0 0 143 -75,-2.0 -73,-0.9 -2,-0.3 -21,-0.0 -0.942 360.0 360.0-120.4 360.0 10.4 -13.7 6.1