==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 13-MAY-02 1J5K . COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.M.CLORE,D.T.BRADDOCK . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5478.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 19.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 36.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 10 A G 0 0 137 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-170.3 19.3 -32.9 2.4 2 11 A G - 0 0 33 1,-0.2 55,-0.0 0, 0.0 0, 0.0 -0.698 360.0 -70.2-112.5 167.6 17.3 -29.7 2.4 3 12 A P - 0 0 95 0, 0.0 55,-0.7 0, 0.0 2,-0.7 -0.098 45.6-127.7 -50.7 149.6 18.4 -26.0 2.6 4 13 A I E +A 57 0A 124 53,-0.2 2,-0.3 -3,-0.1 53,-0.2 -0.888 38.5 166.0-106.8 111.8 19.9 -24.8 5.9 5 14 A I E -A 56 0A 67 51,-1.3 51,-1.2 -2,-0.7 2,-0.4 -0.884 28.3-133.9-124.4 157.3 18.1 -21.7 7.2 6 15 A T E +A 55 0A 99 -2,-0.3 2,-0.3 49,-0.2 49,-0.2 -0.895 24.3 175.7-112.1 138.2 18.2 -19.9 10.6 7 16 A T E -A 54 0A 35 47,-2.0 47,-3.1 -2,-0.4 2,-0.4 -0.981 14.6-152.8-138.3 152.0 15.0 -18.7 12.4 8 17 A Q E -A 53 0A 142 -2,-0.3 2,-0.4 45,-0.2 45,-0.2 -0.975 12.0-178.2-127.5 139.4 14.4 -17.1 15.8 9 18 A V E -A 52 0A 48 43,-3.3 43,-3.4 -2,-0.4 2,-0.4 -0.990 12.1-152.6-135.4 145.7 11.2 -17.2 17.9 10 19 A T E -A 51 0A 88 -2,-0.4 41,-0.2 41,-0.2 -2,-0.0 -0.936 11.5-167.3-118.7 139.9 10.3 -15.6 21.3 11 20 A I E -A 50 0A 16 39,-1.3 39,-2.2 -2,-0.4 5,-0.1 -0.966 34.7 -94.5-126.7 144.7 7.7 -17.1 23.7 12 21 A P E >> -A 49 0A 62 0, 0.0 3,-2.2 0, 0.0 4,-0.6 -0.250 34.9-129.6 -52.1 131.5 6.1 -15.6 26.8 13 22 A K H >> S+ 0 0 84 35,-2.1 3,-2.7 1,-0.3 4,-0.7 0.916 104.7 71.0 -55.1 -41.9 8.2 -16.7 29.8 14 23 A D H 34 S+ 0 0 117 1,-0.3 -1,-0.3 34,-0.3 4,-0.2 0.722 104.6 44.2 -49.5 -15.3 5.0 -17.9 31.6 15 24 A L H <> S+ 0 0 14 -3,-2.2 4,-3.5 2,-0.1 5,-0.5 0.548 84.7 94.6-106.1 -10.3 5.1 -20.7 29.0 16 25 A A H S+ 0 0 2 -3,-2.7 4,-2.7 -4,-0.6 5,-0.5 0.930 93.0 41.7 -48.2 -47.9 8.9 -21.4 29.2 17 26 A G H X5S+ 0 0 56 -4,-0.7 4,-1.6 1,-0.2 -1,-0.3 0.873 115.7 52.5 -68.5 -33.1 8.2 -24.2 31.7 18 27 A S H 45S+ 0 0 33 -4,-0.2 -2,-0.2 2,-0.2 -1,-0.2 0.900 119.5 31.7 -71.4 -39.0 5.2 -25.3 29.6 19 28 A I H <5S+ 0 0 4 -4,-3.5 -2,-0.2 1,-0.1 -3,-0.2 0.883 124.9 44.1 -86.7 -39.5 7.1 -25.5 26.3 20 29 A I H <5S- 0 0 40 -4,-2.7 7,-1.8 -5,-0.5 6,-0.9 0.926 96.2-161.9 -70.7 -42.4 10.5 -26.6 27.7 21 30 A G ><< - 0 0 25 -4,-1.6 3,-0.6 -5,-0.5 2,-0.3 -0.081 35.1 -49.2 83.2 170.7 9.0 -29.1 30.1 22 31 A K G > S+ 0 0 192 1,-0.2 3,-2.1 2,-0.1 4,-0.2 -0.575 127.9 0.3 -80.1 141.6 10.6 -30.6 33.2 23 32 A G G 3 S- 0 0 69 1,-0.3 -1,-0.2 -2,-0.3 -2,-0.1 0.511 120.7 -82.8 61.4 -2.3 14.2 -31.9 32.6 24 33 A G G <> S+ 0 0 10 -3,-0.6 4,-3.6 -7,-0.1 5,-0.4 0.540 88.9 142.5 85.6 3.9 13.6 -30.8 29.0 25 34 A Q H <> S+ 0 0 150 -3,-2.1 4,-1.1 1,-0.2 5,-0.2 0.798 77.1 46.6 -50.3 -23.0 11.7 -34.0 28.1 26 35 A R H > S+ 0 0 88 -6,-0.9 4,-2.1 -4,-0.2 -1,-0.2 0.954 116.7 37.5 -84.3 -59.3 9.6 -31.7 26.0 27 36 A I H > S+ 0 0 25 -7,-1.8 4,-1.4 2,-0.2 -2,-0.2 0.821 122.1 49.6 -62.4 -26.9 12.2 -29.6 24.2 28 37 A K H X S+ 0 0 96 -4,-3.6 4,-1.3 -8,-0.3 3,-0.4 0.981 110.0 44.9 -77.3 -61.3 14.3 -32.8 23.9 29 38 A Q H X S+ 0 0 120 -4,-1.1 4,-3.3 -5,-0.4 3,-0.4 0.879 111.5 58.2 -51.1 -33.4 11.8 -35.2 22.5 30 39 A I H X>S+ 0 0 6 -4,-2.1 4,-2.1 1,-0.2 5,-0.5 0.959 106.9 45.2 -62.2 -47.5 10.8 -32.4 20.2 31 40 A R H <5S+ 0 0 78 -4,-1.4 -1,-0.2 -3,-0.4 -2,-0.2 0.643 117.5 46.7 -71.4 -11.2 14.4 -32.2 18.8 32 41 A H H <5S+ 0 0 133 -4,-1.3 -2,-0.2 -3,-0.4 -1,-0.2 0.850 113.4 44.2 -96.8 -43.2 14.4 -36.0 18.5 33 42 A E H <5S+ 0 0 141 -4,-3.3 -2,-0.2 -5,-0.2 -3,-0.2 0.866 132.2 26.2 -68.4 -33.3 11.1 -36.6 16.9 34 43 A S T <5S- 0 0 17 -4,-2.1 -3,-0.2 -5,-0.4 -1,-0.2 0.759 95.7-138.8 -99.1 -31.5 11.8 -33.7 14.5 35 44 A G < + 0 0 32 -5,-0.5 -4,-0.2 1,-0.2 -3,-0.2 0.730 53.5 141.7 79.7 19.8 15.6 -33.9 14.6 36 45 A A - 0 0 5 -6,-0.4 2,-0.3 24,-0.2 -1,-0.2 -0.492 49.7-123.5 -89.7 165.9 15.9 -30.1 14.7 37 46 A S E -B 55 0A 68 18,-1.0 18,-1.7 -2,-0.1 2,-0.4 -0.831 24.7-169.8-107.5 146.8 18.4 -28.1 16.7 38 47 A I E -B 54 0A 21 -2,-0.3 2,-0.4 16,-0.2 16,-0.2 -0.975 7.2-175.9-140.8 128.7 17.4 -25.4 19.3 39 48 A K E -B 53 0A 137 14,-2.9 14,-3.5 -2,-0.4 2,-0.5 -0.972 8.7-160.0-123.5 134.0 19.5 -22.9 21.1 40 49 A I E -B 52 0A 56 -2,-0.4 12,-0.2 12,-0.2 -2,-0.0 -0.943 17.3-130.8-116.9 122.8 18.0 -20.5 23.8 41 50 A D - 0 0 81 10,-1.2 10,-0.2 -2,-0.5 3,-0.1 -0.192 52.8 -70.2 -61.2 161.7 19.9 -17.3 24.8 42 51 A E S S- 0 0 167 1,-0.1 9,-0.2 8,-0.1 -1,-0.1 -0.254 72.2 -84.0 -53.7 140.4 20.3 -16.9 28.5 43 52 A P - 0 0 77 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.103 46.5-119.6 -48.0 139.8 16.9 -16.1 30.1 44 53 A L - 0 0 58 5,-0.3 2,-0.4 -3,-0.1 3,-0.4 -0.681 22.9-153.5 -87.4 136.4 15.9 -12.4 29.9 45 54 A E S S+ 0 0 179 -2,-0.4 3,-0.1 1,-0.2 -1,-0.0 -0.844 79.7 26.3-107.0 142.3 15.3 -10.6 33.1 46 55 A G S S+ 0 0 95 -2,-0.4 2,-0.3 1,-0.3 -1,-0.2 0.564 113.0 84.9 83.8 4.4 12.9 -7.6 33.3 47 56 A S S S- 0 0 58 -3,-0.4 -1,-0.3 2,-0.1 -3,-0.0 -0.979 71.9-143.5-137.5 149.8 11.1 -9.1 30.3 48 57 A E S S+ 0 0 152 -2,-0.3 -35,-2.1 -3,-0.1 2,-0.3 -0.140 77.8 78.3-105.7 40.1 8.4 -11.7 30.0 49 58 A D E -A 12 0A 68 -37,-0.3 -5,-0.3 -36,-0.1 2,-0.3 -0.992 61.0-153.4-147.5 138.4 9.8 -13.4 26.8 50 59 A R E -A 11 0A 56 -39,-2.2 -39,-1.3 -2,-0.3 2,-0.6 -0.724 21.9-121.9-107.5 159.9 12.6 -15.8 26.1 51 60 A I E -A 10 0A 42 -2,-0.3 -10,-1.2 -10,-0.2 2,-0.5 -0.885 24.3-171.4-105.9 123.9 14.6 -16.1 22.9 52 61 A I E -AB 9 40A 6 -43,-3.4 -43,-3.3 -2,-0.6 2,-0.5 -0.933 5.0-161.5-112.9 130.1 14.6 -19.4 21.0 53 62 A T E -AB 8 39A 20 -14,-3.5 -14,-2.9 -2,-0.5 2,-0.4 -0.926 6.2-161.9-111.3 128.0 16.9 -19.9 18.0 54 63 A I E +AB 7 38A 0 -47,-3.1 -47,-2.0 -2,-0.5 2,-0.4 -0.862 9.5 179.3-109.4 143.4 16.2 -22.7 15.6 55 64 A T E +AB 6 37A 62 -18,-1.7 -18,-1.0 -2,-0.4 2,-0.3 -0.913 34.8 80.3-145.4 115.9 18.7 -24.2 13.1 56 65 A G E S-A 5 0A 8 -51,-1.2 -51,-1.3 -2,-0.4 -20,-0.1 -0.979 81.7 -42.1 173.9-172.2 18.0 -27.0 10.7 57 66 A T E > -A 4 0A 31 -2,-0.3 4,-2.6 -53,-0.2 3,-0.4 -0.367 63.0-104.5 -73.0 157.0 16.4 -27.8 7.4 58 67 A Q H > S+ 0 0 109 -55,-0.7 4,-4.4 1,-0.3 5,-0.3 0.912 123.7 57.9 -50.5 -40.5 13.1 -26.2 6.8 59 68 A D H > S+ 0 0 109 2,-0.2 4,-3.8 1,-0.2 5,-0.4 0.952 108.5 45.4 -55.6 -47.3 11.4 -29.5 7.4 60 69 A Q H > S+ 0 0 52 -3,-0.4 4,-2.8 2,-0.2 5,-0.3 0.951 117.5 43.0 -63.7 -45.3 13.0 -29.6 10.9 61 70 A I H X S+ 0 0 7 -4,-2.6 4,-3.9 2,-0.2 5,-0.3 0.954 117.0 48.8 -65.4 -43.8 12.1 -26.0 11.6 62 71 A Q H X S+ 0 0 110 -4,-4.4 4,-2.0 -5,-0.3 5,-0.2 0.984 116.9 39.7 -59.0 -57.2 8.6 -26.6 10.1 63 72 A N H X S+ 0 0 88 -4,-3.8 4,-1.3 -5,-0.3 -1,-0.2 0.891 120.5 47.9 -60.4 -37.7 8.1 -29.8 12.2 64 73 A A H X S+ 0 0 0 -4,-2.8 4,-2.1 -5,-0.4 -2,-0.2 0.955 109.2 49.8 -71.3 -49.8 9.7 -28.1 15.2 65 74 A Q H X S+ 0 0 80 -4,-3.9 4,-2.1 -5,-0.3 5,-0.3 0.925 108.2 54.0 -58.5 -41.9 7.8 -24.8 15.1 66 75 A Y H X S+ 0 0 161 -4,-2.0 4,-2.0 -5,-0.3 -1,-0.2 0.926 109.1 49.5 -59.6 -39.6 4.4 -26.6 14.8 67 76 A L H X S+ 0 0 39 -4,-1.3 4,-1.9 -5,-0.2 -1,-0.2 0.897 107.5 54.5 -67.6 -37.0 5.3 -28.5 18.0 68 77 A L H X S+ 0 0 15 -4,-2.1 4,-1.5 1,-0.2 -2,-0.2 0.977 111.7 42.4 -62.0 -52.6 6.3 -25.4 19.8 69 78 A Q H X S+ 0 0 152 -4,-2.1 4,-0.5 1,-0.2 -1,-0.2 0.906 109.3 59.3 -61.7 -38.9 3.0 -23.6 19.2 70 79 A N H >X S+ 0 0 59 -4,-2.0 3,-1.6 -5,-0.3 4,-0.6 0.931 102.2 54.1 -56.9 -42.4 1.0 -26.8 20.0 71 80 A S H >X S+ 0 0 3 -4,-1.9 3,-1.7 1,-0.3 4,-1.3 0.943 97.1 63.1 -58.1 -46.0 2.6 -26.9 23.5 72 81 A V H 3X S+ 0 0 40 -4,-1.5 4,-1.0 1,-0.3 -1,-0.3 0.691 94.4 68.3 -53.8 -13.0 1.4 -23.3 24.1 73 82 A K H << S+ 0 0 152 -3,-1.6 -1,-0.3 -4,-0.5 -2,-0.2 0.884 97.0 47.2 -75.4 -40.4 -2.1 -24.9 23.8 74 83 A Q H << S+ 0 0 136 -3,-1.7 -2,-0.2 -4,-0.6 -1,-0.1 0.900 106.1 56.5 -72.7 -38.5 -1.9 -27.0 26.9 75 84 A Y H < 0 0 127 -4,-1.3 -1,-0.2 -60,-0.1 -2,-0.2 0.930 360.0 360.0 -59.2 -40.7 -0.6 -24.2 29.2 76 85 A S < 0 0 114 -4,-1.0 -61,-0.0 -61,-0.0 0, 0.0 -0.484 360.0 360.0 -67.1 360.0 -3.7 -22.2 28.2