==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 30-APR-02 1J6Q . COMPND 2 MOLECULE: CYTOCHROME C MATURATION PROTEIN E; . SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA PUTREFACIENS; . AUTHOR F.ARNESANO,L.BANCI,P.D.BARKER,I.BERTINI,A.ROSATO,X.C.SU, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5980.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 66.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 6.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 28.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 17.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 32 A S 0 0 175 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -88.8 16.2 -4.4 12.6 2 33 A N - 0 0 96 25,-0.0 2,-2.6 2,-0.0 27,-0.1 -0.840 360.0-125.3-160.6 130.1 13.5 -3.2 10.2 3 34 A L + 0 0 128 -2,-0.3 2,-2.5 25,-0.2 27,-0.2 -0.302 40.0 163.5 -78.7 62.0 10.0 -1.9 11.1 4 35 A N + 0 0 46 -2,-2.6 2,-0.2 25,-0.2 25,-0.2 -0.376 27.4 142.6 -76.3 62.8 8.0 -4.3 8.9 5 36 A L - 0 0 75 -2,-2.5 25,-2.6 23,-0.2 2,-0.6 -0.645 58.8-105.9-101.3 162.2 4.8 -3.6 10.8 6 37 A F E +a 30 0A 99 -2,-0.2 2,-0.3 23,-0.2 25,-0.2 -0.817 44.1 180.0 -91.1 118.5 1.2 -3.2 9.5 7 38 A Y E -a 31 0A 77 23,-2.9 25,-2.6 -2,-0.6 22,-0.0 -0.920 29.1-110.5-126.5 143.5 0.2 0.4 9.5 8 39 A T >> - 0 0 52 -2,-0.3 4,-1.6 23,-0.2 3,-0.8 -0.504 21.9-127.3 -74.3 142.5 -3.1 2.1 8.4 9 40 A P T 34 S+ 0 0 0 0, 0.0 5,-0.2 0, 0.0 -1,-0.1 0.931 111.2 59.0 -54.7 -46.6 -3.1 4.3 5.2 10 41 A S T >> S+ 0 0 6 1,-0.2 4,-2.7 2,-0.2 3,-1.1 0.826 102.4 53.9 -46.3 -42.6 -4.7 7.1 7.2 11 42 A E T <4 S+ 0 0 72 -3,-0.8 2,-1.3 1,-0.3 -1,-0.2 0.981 105.3 52.7 -59.0 -56.2 -1.7 7.0 9.6 12 43 A I T 3< S+ 0 0 0 -4,-1.6 6,-0.4 1,-0.2 -1,-0.3 -0.084 116.4 40.7 -79.4 42.1 0.7 7.4 6.6 13 44 A V T X4 S+ 0 0 33 -2,-1.3 2,-2.2 -3,-1.1 3,-0.6 0.288 94.1 77.8-141.9 -55.2 -1.2 10.5 5.4 14 45 A N T 3< S- 0 0 118 -4,-2.7 45,-0.0 1,-0.3 -4,-0.0 -0.385 128.8 -40.7 -73.2 80.5 -2.0 12.5 8.6 15 46 A G T 3 S+ 0 0 36 -2,-2.2 -1,-0.3 1,-0.1 -3,-0.1 0.950 126.9 74.3 70.5 53.8 1.3 14.1 9.3 16 47 A K S < >S+ 0 0 37 -3,-0.6 5,-2.0 5,-0.1 6,-0.4 -0.039 102.8 1.3-149.5-107.5 3.6 11.2 8.5 17 48 A T T > 5S+ 0 0 0 3,-0.2 3,-1.7 2,-0.2 -4,-0.2 0.961 128.9 50.9 -64.3 -61.8 4.5 9.9 5.0 18 49 A D T 3 5S+ 0 0 101 -6,-0.4 -1,-0.2 1,-0.3 -4,-0.1 0.892 121.9 34.7 -37.8 -55.0 2.5 12.4 2.9 19 50 A T T 3 5S- 0 0 76 -6,-0.4 -1,-0.3 70,-0.1 -2,-0.2 0.446 102.6-134.9 -86.4 -6.5 4.1 15.3 4.8 20 51 A G T < 5 + 0 0 33 -3,-1.7 -3,-0.2 -4,-0.4 -2,-0.1 0.816 66.1 126.7 50.8 40.0 7.5 13.5 5.2 21 52 A V S - 0 0 145 -2,-0.7 3,-0.7 1,-0.1 61,-0.2 -0.422 32.3 -91.9 -67.4 153.8 11.6 9.5 5.8 25 56 A A T 3 S+ 0 0 41 1,-0.2 61,-0.2 -2,-0.1 -1,-0.1 -0.183 106.0 51.3 -61.4 160.5 11.4 7.8 2.3 26 57 A G T 3 S+ 0 0 56 59,-2.4 2,-0.3 1,-0.3 -1,-0.2 0.398 81.6 119.0 91.3 -1.1 13.4 4.6 1.7 27 58 A Q < - 0 0 81 -3,-0.7 58,-2.8 59,-0.1 2,-0.4 -0.689 62.7-120.4 -96.0 148.4 12.1 2.7 4.8 28 59 A R E + B 0 84A 91 -2,-0.3 2,-0.3 56,-0.2 56,-0.2 -0.737 44.3 144.8 -84.3 139.5 10.2 -0.6 4.8 29 60 A I E - B 0 83A 18 54,-0.7 54,-1.5 -2,-0.4 2,-0.5 -0.888 43.5-120.6-149.4 174.5 6.7 -0.8 6.3 30 61 A R E -aB 6 82A 64 -25,-2.6 -23,-2.9 -2,-0.3 2,-0.3 -0.991 19.4-149.2-118.9 120.9 3.5 -2.7 5.4 31 62 A V E -aB 7 81A 2 50,-2.6 50,-3.1 -2,-0.5 2,-0.4 -0.696 15.2-170.4 -78.0 142.1 0.4 -0.6 4.7 32 63 A G E + B 0 80A 16 -25,-2.6 2,-0.3 -2,-0.3 48,-0.2 -0.976 30.5 105.5-135.8 122.1 -2.8 -2.5 5.7 33 64 A G E - B 0 79A 15 46,-2.0 46,-2.3 -2,-0.4 2,-0.4 -0.929 64.8 -57.7-173.4-172.6 -6.2 -1.1 4.6 34 65 A M E -CB 54 78A 63 20,-2.6 20,-2.9 -2,-0.3 2,-0.5 -0.771 45.6-122.1-101.3 134.0 -9.2 -1.4 2.3 35 66 A V E -C 53 0A 6 42,-3.1 41,-0.5 -2,-0.4 2,-0.3 -0.646 22.3-123.6 -75.9 119.2 -9.0 -1.3 -1.5 36 67 A T > - 0 0 33 16,-1.4 3,-1.0 -2,-0.5 4,-0.3 -0.491 26.1-130.2 -60.2 118.6 -10.9 1.5 -3.3 37 68 A V T 3 S+ 0 0 113 -2,-0.3 2,-0.3 1,-0.3 3,-0.3 0.785 99.6 34.7 -46.6 -43.8 -13.1 -0.6 -5.6 38 69 A G T 3 S+ 0 0 70 1,-0.2 -1,-0.3 37,-0.1 -2,-0.1 -0.539 95.8 84.1-115.9 61.4 -12.3 1.5 -8.8 39 70 A S < + 0 0 30 -3,-1.0 2,-0.7 -2,-0.3 -1,-0.2 0.405 50.4 111.9-137.2 -4.4 -8.6 2.5 -8.2 40 71 A M + 0 0 30 -4,-0.3 2,-0.3 -3,-0.3 11,-0.2 -0.656 44.4 173.3 -69.4 110.2 -6.6 -0.5 -9.5 41 72 A V E -D 50 0A 78 9,-2.8 9,-2.9 -2,-0.7 2,-0.3 -0.947 8.3-170.2-124.4 147.2 -4.9 0.9 -12.7 42 73 A R E -D 49 0A 189 -2,-0.3 7,-0.2 7,-0.2 -2,-0.0 -0.973 22.2-116.9-139.0 146.4 -2.3 -1.0 -14.7 43 74 A D > - 0 0 60 5,-2.9 3,-2.0 -2,-0.3 5,-0.3 -0.566 23.4-127.3 -76.8 149.8 0.1 -0.3 -17.6 44 75 A P T 3 S+ 0 0 123 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.749 109.4 79.9 -65.9 -19.6 -0.3 -2.2 -20.9 45 76 A N T 3 S- 0 0 96 1,-0.1 -3,-0.0 3,-0.1 -2,-0.0 0.811 97.5-145.6 -49.1 -30.9 3.4 -2.9 -20.2 46 77 A S S < S+ 0 0 75 -3,-2.0 -1,-0.1 2,-0.3 3,-0.1 0.777 82.1 75.2 68.3 30.7 1.6 -5.5 -17.9 47 78 A L S S+ 0 0 76 1,-0.3 2,-0.4 20,-0.1 -1,-0.1 0.177 80.1 68.4-154.9 7.0 4.4 -5.2 -15.3 48 79 A H + 0 0 85 -5,-0.3 -5,-2.9 18,-0.2 2,-0.3 -0.992 58.7 163.8-137.4 127.4 3.6 -1.8 -13.7 49 80 A V E -DE 42 65A 21 16,-3.0 16,-2.6 -2,-0.4 2,-0.3 -0.989 11.4-175.5-148.0 139.7 0.5 -1.5 -11.6 50 81 A Q E +DE 41 64A 85 -9,-2.9 -9,-2.8 -2,-0.3 2,-0.3 -0.988 3.6 178.2-144.9 154.6 -0.7 1.0 -9.0 51 82 A F E - E 0 63A 1 12,-2.7 12,-3.2 -2,-0.3 2,-0.4 -0.976 27.3-118.5-153.2 156.6 -3.7 1.3 -6.7 52 83 A A E - E 0 62A 9 -2,-0.3 -16,-1.4 -16,-0.2 2,-0.4 -0.885 26.0-171.2-102.7 132.2 -5.3 3.5 -4.0 53 84 A V E +CE 35 61A 3 8,-2.8 8,-3.2 -2,-0.4 -18,-0.2 -0.993 14.4 160.8-124.8 134.2 -5.8 2.0 -0.5 54 85 A H E -C 34 0A 50 -20,-2.9 -20,-2.6 -2,-0.4 2,-0.3 -0.569 27.7-128.9-132.5-168.5 -7.8 3.8 2.2 55 86 A D > - 0 0 32 -22,-0.2 3,-2.4 -2,-0.2 4,-0.1 -0.874 42.3 -95.4-136.3 169.7 -9.6 3.3 5.5 56 87 A S T 3 S+ 0 0 105 1,-0.3 -1,-0.0 -2,-0.3 0, 0.0 0.823 123.7 72.3 -53.2 -31.0 -13.1 4.3 6.7 57 88 A L T 3 S- 0 0 138 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.539 108.6-128.5 -64.9 -7.7 -11.1 7.2 8.2 58 89 A G < + 0 0 58 -3,-2.4 2,-0.9 1,-0.2 -2,-0.1 0.730 63.4 136.9 69.6 27.1 -10.8 8.4 4.5 59 90 A G - 0 0 7 -4,-0.1 2,-0.2 -45,-0.0 -1,-0.2 -0.723 39.4-164.4-102.0 77.1 -7.0 8.9 4.4 60 91 A E - 0 0 100 -2,-0.9 2,-0.3 -6,-0.1 -6,-0.3 -0.475 4.4-165.7 -67.9 130.8 -6.4 7.4 1.0 61 92 A I E -E 53 0A 11 -8,-3.2 -8,-2.8 -2,-0.2 2,-0.5 -0.880 16.5-127.9-113.0 149.8 -2.8 6.4 0.2 62 93 A L E -E 52 0A 76 -2,-0.3 29,-1.6 27,-0.2 2,-0.4 -0.870 21.9-165.9-100.8 128.4 -1.4 5.6 -3.2 63 94 A V E -Ef 51 91A 0 -12,-3.2 -12,-2.7 -2,-0.5 2,-0.3 -0.926 2.8-158.6-115.7 137.5 0.6 2.3 -3.6 64 95 A T E -Ef 50 92A 38 27,-3.3 29,-2.8 -2,-0.4 2,-0.3 -0.893 6.4-170.7-116.9 145.8 2.8 1.5 -6.7 65 96 A Y E -E 49 0A 20 -16,-2.6 -16,-3.0 -2,-0.3 29,-0.1 -0.995 12.0-161.2-145.7 127.5 3.8 -2.0 -7.7 66 97 A D + 0 0 106 27,-0.5 2,-0.3 -2,-0.3 -18,-0.2 -0.306 69.9 42.6-117.9 48.2 6.4 -3.0 -10.4 67 98 A D S S- 0 0 86 -18,-0.1 2,-0.5 -2,-0.0 -20,-0.1 -0.901 104.2 -60.0-162.9-179.6 5.6 -6.6 -11.3 68 99 A L - 0 0 114 -2,-0.3 -2,-0.1 -21,-0.1 -21,-0.1 -0.645 54.1-129.1 -72.6 123.1 2.4 -8.7 -11.8 69 100 A L > - 0 0 16 -2,-0.5 3,-0.6 -4,-0.1 -1,-0.0 -0.270 23.2-113.3 -59.6 158.3 0.2 -8.6 -8.8 70 101 A P T 3 S+ 0 0 76 0, 0.0 2,-1.9 0, 0.0 -1,-0.1 0.962 104.8 14.5 -64.4 -92.4 -1.0 -12.1 -7.5 71 102 A D T 3 S- 0 0 90 1,-0.2 3,-0.2 3,-0.1 -2,-0.0 -0.187 118.1 -92.9 -77.9 43.2 -4.9 -12.5 -8.0 72 103 A L S < S- 0 0 102 -2,-1.9 -1,-0.2 -3,-0.6 -3,-0.1 0.543 73.7 -74.0 50.2 13.0 -4.6 -9.4 -10.3 73 104 A F - 0 0 11 1,-0.1 2,-0.3 23,-0.0 -1,-0.2 0.990 55.6-133.4 59.5 79.4 -5.4 -7.6 -6.9 74 105 A R - 0 0 156 -3,-0.2 3,-0.2 1,-0.1 -1,-0.1 -0.491 28.9-135.3 -57.5 116.7 -9.1 -8.4 -6.5 75 106 A E S S+ 0 0 79 -2,-0.3 -38,-0.1 1,-0.2 -39,-0.1 -0.151 74.1 47.2 -75.9 170.6 -10.6 -5.0 -5.7 76 107 A G S S+ 0 0 53 -41,-0.5 2,-0.3 1,-0.3 -1,-0.2 0.907 93.9 84.5 65.1 47.2 -13.2 -4.1 -3.0 77 108 A Q S S- 0 0 51 -3,-0.2 -42,-3.1 -42,-0.1 2,-0.3 -0.879 83.0 -89.4-151.4-179.8 -11.6 -6.0 -0.1 78 109 A G E +B 34 0A 12 -44,-0.3 22,-0.3 -2,-0.3 2,-0.3 -0.748 45.1 171.7 -92.9 149.4 -8.9 -5.4 2.5 79 110 A I E -B 33 0A 8 -46,-2.3 -46,-2.0 -2,-0.3 2,-0.4 -0.953 29.0-130.6-144.8 166.4 -5.2 -6.3 1.8 80 111 A V E -BG 32 97A 15 17,-1.6 17,-2.8 -2,-0.3 2,-0.4 -0.985 23.8-167.2-119.4 133.2 -1.8 -5.8 3.4 81 112 A A E -BG 31 96A 3 -50,-3.1 -50,-2.6 -2,-0.4 2,-0.4 -0.987 3.7-172.7-130.5 118.4 1.0 -4.5 1.1 82 113 A Q E +BG 30 95A 5 13,-2.3 12,-3.0 -2,-0.4 13,-1.9 -0.874 32.9 93.8-114.5 145.5 4.7 -4.5 2.0 83 114 A G E S-BG 29 93A 8 -54,-1.5 -54,-0.7 -2,-0.4 2,-0.3 -0.804 70.3 -52.2 177.4-125.6 7.7 -3.0 0.3 84 115 A V E -BG 28 92A 55 8,-2.7 8,-2.9 -2,-0.2 2,-0.6 -0.964 47.1 -99.1-140.4 146.6 9.5 0.4 0.8 85 116 A L E + G 0 91A 4 -58,-2.8 -59,-2.4 -2,-0.3 6,-0.2 -0.597 53.2 169.9 -62.4 113.4 8.6 4.1 0.8 86 117 A G + 0 0 35 4,-1.9 2,-2.1 -2,-0.6 -1,-0.1 0.754 59.1 24.3 -96.8 -99.2 9.6 5.0 -2.7 87 118 A E S > S- 0 0 137 1,-0.2 3,-2.7 -62,-0.1 -1,-0.2 -0.533 109.1 -96.4 -78.4 78.9 8.6 8.4 -4.1 88 119 A D T 3 S+ 0 0 97 -2,-2.1 -1,-0.2 1,-0.3 3,-0.1 0.530 120.4 23.9 13.5 67.3 8.4 10.2 -0.7 89 120 A G T 3 S+ 0 0 12 1,-0.5 -1,-0.3 -27,-0.1 2,-0.3 -0.361 109.9 79.8 146.0 -57.7 4.6 9.8 -0.5 90 121 A K S < S- 0 0 60 -3,-2.7 -4,-1.9 -73,-0.1 2,-0.6 -0.593 73.7-133.9 -83.1 141.4 4.0 6.7 -2.7 91 122 A L E -fG 63 85A 8 -29,-1.6 -27,-3.3 -2,-0.3 2,-1.1 -0.837 5.4-147.8 -93.2 122.9 4.7 3.2 -1.4 92 123 A A E -fG 64 84A 32 -8,-2.9 -8,-2.7 -2,-0.6 2,-0.3 -0.817 34.7-179.9 -87.3 95.5 6.7 1.0 -3.7 93 124 A A E + G 0 83A 2 -29,-2.8 -27,-0.5 -2,-1.1 -10,-0.3 -0.697 28.8 148.8 -99.8 153.2 5.0 -2.3 -2.6 94 125 A T E + 0 0 59 -12,-3.0 2,-2.1 -2,-0.3 -11,-0.2 0.385 60.9 75.1-147.3 -40.3 5.6 -5.8 -3.8 95 126 A E E + G 0 82A 75 -13,-1.9 -13,-2.3 2,-0.1 2,-0.5 -0.549 63.5 166.8 -82.7 76.3 5.0 -8.3 -0.9 96 127 A V E - G 0 81A 18 -2,-2.1 2,-0.5 -15,-0.3 -15,-0.2 -0.852 17.5-166.6 -88.5 129.2 1.2 -8.0 -1.1 97 128 A L E - G 0 80A 82 -17,-2.8 2,-2.2 -2,-0.5 -17,-1.6 -0.964 14.7-156.2-116.5 111.6 -0.7 -10.6 1.0 98 129 A A + 0 0 46 -2,-0.5 -19,-0.1 1,-0.2 -17,-0.1 -0.403 38.4 150.9 -75.7 59.7 -4.4 -10.9 0.2 99 130 A K 0 0 154 -2,-2.2 -1,-0.2 1,-0.3 -20,-0.1 0.830 360.0 360.0 -67.3 -27.4 -4.8 -12.4 3.7 100 131 A H 0 0 164 -3,-0.4 -1,-0.3 -22,-0.3 -22,-0.2 -0.475 360.0 360.0 -77.5 360.0 -8.3 -10.9 3.6