==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 28-SEP-06 2J6F . COMPND 2 MOLECULE: CD2-ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.MONCALIAN,N.CARDENES,Y.L.DERIBE,M.SPINOLA-AMILIBIA, I.DIKI . 65 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4495.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 55.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 32.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 97 0, 0.0 27,-2.9 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 132.7 50.9 22.1 24.9 2 3 A D - 0 0 63 54,-0.5 54,-2.9 25,-0.2 2,-0.3 -0.770 360.0-151.5-107.5 157.9 49.1 25.1 26.4 3 4 A Y E -AB 25 55A 27 22,-2.3 22,-2.8 -2,-0.3 2,-0.4 -0.961 7.5-137.3-127.5 150.0 50.6 28.5 27.3 4 5 A I E -AB 24 54A 61 50,-2.8 50,-2.4 -2,-0.3 2,-0.5 -0.865 25.9-119.6-104.7 141.4 49.8 31.2 29.9 5 6 A V E + B 0 53A 2 18,-2.6 17,-2.7 -2,-0.4 48,-0.3 -0.696 32.9 172.3 -82.2 125.1 49.9 34.8 28.9 6 7 A E + 0 0 81 46,-2.8 2,-0.3 -2,-0.5 47,-0.2 0.591 67.8 29.2-103.2 -25.6 52.5 36.8 30.9 7 8 A Y S S- 0 0 91 45,-1.7 -1,-0.3 13,-0.1 12,-0.1 -0.999 86.5-106.6-142.1 140.5 52.3 40.1 29.1 8 9 A D - 0 0 87 -2,-0.3 2,-0.4 -3,-0.1 12,-0.2 -0.392 36.6-173.6 -67.6 143.6 49.5 41.9 27.2 9 10 A Y B -C 19 0B 18 10,-2.2 10,-2.2 -2,-0.1 2,-0.5 -0.993 13.5-148.9-140.4 135.0 49.8 41.9 23.4 10 11 A D - 0 0 93 -2,-0.4 8,-0.2 8,-0.2 7,-0.1 -0.905 25.7-116.7-104.5 124.9 47.6 43.7 20.8 11 12 A A - 0 0 35 -2,-0.5 7,-0.1 1,-0.1 3,-0.1 -0.284 24.0-174.0 -53.5 132.4 47.2 42.2 17.4 12 13 A V S S+ 0 0 91 1,-0.1 2,-0.3 5,-0.1 -1,-0.1 0.374 74.2 35.0-110.0 -0.1 48.6 44.3 14.6 13 14 A H S > S- 0 0 61 4,-0.0 3,-1.9 1,-0.0 -1,-0.1 -0.968 88.3-110.5-143.5 158.6 47.2 42.1 11.8 14 15 A D T 3 S+ 0 0 161 -2,-0.3 -3,-0.1 1,-0.3 -1,-0.0 0.687 114.3 60.5 -64.5 -20.9 44.0 40.0 11.5 15 16 A D T 3 S+ 0 0 82 31,-0.1 32,-2.8 2,-0.1 -1,-0.3 0.365 93.9 84.6 -87.1 4.4 45.9 36.7 11.7 16 17 A E B < S-d 47 0C 1 -3,-1.9 2,-0.4 30,-0.3 32,-0.2 -0.736 75.1-125.3-103.6 157.6 47.2 37.6 15.2 17 18 A L - 0 0 3 30,-2.9 2,-0.5 -2,-0.3 -5,-0.1 -0.775 9.6-137.5 -97.3 145.4 45.6 37.2 18.6 18 19 A T - 0 0 63 -2,-0.4 2,-0.3 -8,-0.2 -8,-0.2 -0.909 34.5-173.7 -95.7 125.8 45.1 39.9 21.1 19 20 A I B -C 9 0B 0 -10,-2.2 -10,-2.2 -2,-0.5 2,-0.3 -0.875 14.0-157.5-129.8 150.4 46.0 38.3 24.5 20 21 A R > - 0 0 95 -2,-0.3 3,-2.2 -12,-0.2 -15,-0.3 -0.964 38.3 -79.4-133.2 149.3 45.8 39.5 28.1 21 22 A V T 3 S+ 0 0 92 -2,-0.3 -15,-0.2 1,-0.3 3,-0.1 -0.105 114.0 20.0 -49.2 132.8 47.6 38.5 31.3 22 23 A G T 3 S+ 0 0 47 -17,-2.7 -1,-0.3 1,-0.3 -16,-0.1 0.094 89.7 129.5 96.8 -21.8 46.3 35.2 32.8 23 24 A E < - 0 0 59 -3,-2.2 -18,-2.6 -19,-0.1 2,-0.5 -0.303 52.9-135.4 -65.4 151.4 44.6 33.9 29.7 24 25 A I E -A 4 0A 70 -20,-0.2 2,-0.5 -3,-0.1 -20,-0.2 -0.945 10.5-155.4-109.3 126.0 45.4 30.4 28.6 25 26 A I E -A 3 0A 0 -22,-2.8 -22,-2.3 -2,-0.5 3,-0.3 -0.897 20.0-142.8-102.6 129.5 46.1 29.7 24.9 26 27 A R E +E 40 0C 142 14,-2.7 14,-2.7 -2,-0.5 -24,-0.2 -0.640 63.1 7.0-100.0 147.5 45.3 26.1 23.9 27 28 A N E S- 0 0 81 -2,-0.3 2,-0.3 12,-0.2 -1,-0.2 0.943 79.6-165.4 60.3 58.9 46.9 23.6 21.5 28 29 A V E - 0 0 13 -27,-2.9 2,-0.4 -3,-0.3 11,-0.2 -0.598 11.3-165.8 -90.8 136.8 50.0 25.8 20.7 29 30 A K E -E 38 0C 96 9,-2.7 9,-2.2 -2,-0.3 2,-0.5 -0.958 21.1-126.1-122.1 136.6 52.3 25.1 17.8 30 31 A K E -E 37 0C 149 -2,-0.4 7,-0.2 7,-0.2 2,-0.2 -0.716 32.2-140.3 -86.2 129.3 55.7 26.6 17.3 31 32 A L - 0 0 48 5,-1.5 5,-0.2 -2,-0.5 4,-0.2 -0.497 20.0-120.3 -90.5 156.3 56.0 28.2 13.9 32 33 A Q S S+ 0 0 197 -2,-0.2 2,-0.6 2,-0.1 -1,-0.1 0.892 97.5 89.5 -54.4 -40.2 58.8 28.3 11.4 33 34 A E S > S- 0 0 76 1,-0.1 3,-1.8 2,-0.1 -2,-0.3 -0.467 92.1-121.0 -64.1 107.8 58.6 32.1 11.9 34 35 A E T 3 S+ 0 0 146 -2,-0.6 -1,-0.1 1,-0.2 3,-0.1 -0.228 91.9 19.9 -57.9 136.6 61.0 32.7 14.8 35 36 A G T 3 S+ 0 0 4 1,-0.2 15,-3.1 -4,-0.2 16,-0.4 0.358 106.1 99.8 91.8 -4.1 59.5 34.3 17.9 36 37 A W E < - F 0 49C 2 -3,-1.8 -5,-1.5 13,-0.3 2,-0.3 -0.878 45.2-174.1-122.5 147.4 55.9 33.4 17.0 37 38 A L E -EF 30 48C 0 11,-2.5 11,-2.5 -2,-0.3 2,-0.4 -0.864 16.0-140.1-129.0 163.1 53.4 30.7 18.0 38 39 A E E +EF 29 47C 69 -9,-2.2 -9,-2.7 -2,-0.3 2,-0.3 -0.978 37.3 138.6-126.6 137.8 49.9 29.7 16.8 39 40 A G E - F 0 46C 0 7,-2.1 7,-2.4 -2,-0.4 2,-0.4 -0.970 47.3 -87.8-167.9 176.9 47.2 28.7 19.2 40 41 A E E +EF 26 45C 61 -14,-2.7 -14,-2.7 -2,-0.3 2,-0.4 -0.844 34.6 169.8-108.5 129.7 43.5 28.9 20.2 41 42 A L E > S- F 0 44C 14 3,-2.8 3,-1.2 -2,-0.4 -16,-0.1 -0.978 75.8 -5.4-140.1 126.8 42.0 31.6 22.4 42 43 A N T 3 S- 0 0 137 -2,-0.4 -1,-0.1 1,-0.2 3,-0.1 0.927 131.6 -57.2 58.6 41.3 38.2 32.1 22.9 43 44 A G T 3 S+ 0 0 63 1,-0.2 2,-0.4 -3,-0.1 -1,-0.2 0.567 117.6 108.7 68.1 10.7 37.7 29.4 20.2 44 45 A R E < - F 0 41C 112 -3,-1.2 -3,-2.8 2,-0.0 2,-0.4 -0.967 60.4-140.3-120.9 136.0 39.8 31.3 17.5 45 46 A R E + F 0 40C 81 -2,-0.4 2,-0.3 -5,-0.3 -5,-0.2 -0.795 38.0 137.5 -95.9 138.6 43.2 30.3 16.3 46 47 A G E - F 0 39C 2 -7,-2.4 -7,-2.1 -2,-0.4 -30,-0.3 -0.958 48.6 -81.3-164.5 178.8 45.8 32.9 15.6 47 48 A M E +dF 16 38C 21 -32,-2.8 -30,-2.9 -2,-0.3 -9,-0.2 -0.617 40.5 170.1 -96.3 145.0 49.5 34.0 15.9 48 49 A F E - F 0 37C 0 -11,-2.5 -11,-2.5 -2,-0.3 2,-0.2 -0.993 38.2 -91.7-152.0 154.0 51.1 35.5 19.0 49 50 A P E > - F 0 36C 0 0, 0.0 3,-1.3 0, 0.0 -13,-0.3 -0.453 24.4-140.8 -75.4 139.6 54.6 36.3 20.2 50 51 A D G > S+ 0 0 37 -15,-3.1 3,-0.6 1,-0.3 -14,-0.1 0.636 96.3 61.2 -73.7 -15.3 56.5 33.6 22.2 51 52 A N G 3 S+ 0 0 50 -16,-0.4 -1,-0.3 1,-0.2 15,-0.1 0.293 95.8 60.8 -96.9 9.1 58.1 36.1 24.6 52 53 A F G < S+ 0 0 9 -3,-1.3 -46,-2.8 -46,-0.0 -45,-1.7 0.321 107.5 48.2-106.8 2.6 54.7 37.3 26.0 53 54 A V E < -B 5 0A 10 -3,-0.6 2,-0.4 -48,-0.3 -48,-0.2 -0.852 67.5-138.6-141.0 165.1 53.8 33.8 27.2 54 55 A K E -B 4 0A 122 -50,-2.4 -50,-2.8 -2,-0.3 2,-0.2 -1.000 27.9-114.1-131.7 135.3 55.1 30.8 29.1 55 56 A E E -B 3 0A 69 -2,-0.4 2,-0.7 -52,-0.2 -52,-0.3 -0.436 30.5-127.4 -62.5 131.9 54.6 27.1 28.3 56 57 A I 0 0 77 -54,-2.9 -54,-0.5 1,-0.2 -1,-0.1 -0.765 360.0 360.0 -84.0 118.1 52.5 25.3 30.9 57 58 A K 0 0 215 -2,-0.7 -1,-0.2 -56,-0.1 -54,-0.0 0.574 360.0 360.0-121.6 360.0 54.4 22.3 32.1 58 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 59 905 C P 0 0 134 0, 0.0 2,-0.0 0, 0.0 -46,-0.0 0.000 360.0 360.0 360.0 151.4 53.8 42.0 5.8 60 906 C P - 0 0 120 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.313 360.0-137.5 -65.2 154.4 56.8 40.9 8.0 61 907 C K - 0 0 29 1,-0.0 -25,-0.0 3,-0.0 2,-0.0 -0.941 10.9-137.5-112.3 140.8 56.2 40.7 11.8 62 908 C P - 0 0 86 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 -0.179 29.9-102.8 -75.5-178.8 58.8 42.0 14.3 63 909 C R - 0 0 136 -14,-0.1 -28,-0.1 -13,-0.0 -27,-0.1 -0.858 52.0-134.4 -99.1 90.0 59.7 40.1 17.5 64 910 C P - 0 0 19 0, 0.0 2,-0.3 0, 0.0 -13,-0.1 -0.073 12.9-135.1 -56.3 149.0 57.6 42.4 19.7 65 911 C R 0 0 213 1,-0.1 -13,-0.0 -13,-0.0 0, 0.0 -0.781 360.0 360.0-103.5 142.5 59.2 43.8 22.9 66 912 C R 0 0 175 -2,-0.3 -1,-0.1 -15,-0.1 -58,-0.1 0.384 360.0 360.0 -70.4 360.0 57.4 43.9 26.3