==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 02-OCT-06 2J6O . COMPND 2 MOLECULE: CD2-ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.MONCALIAN,N.CARDENES,Y.L.DERIBE,M.SPINOLA-AMILIBIA, . 64 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4495.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 51.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 32.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A V 0 0 85 0, 0.0 27,-3.4 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 143.7 50.7 44.4 9.3 2 3 A D - 0 0 64 54,-0.4 54,-2.4 25,-0.2 2,-0.3 -0.799 360.0-153.3-106.4 153.3 49.0 41.4 7.6 3 4 A Y E -AB 25 55A 17 22,-2.5 22,-3.0 -2,-0.3 2,-0.4 -0.932 7.7-138.4-125.5 151.3 50.6 37.9 6.8 4 5 A I E -AB 24 54A 56 50,-2.8 50,-1.9 -2,-0.3 2,-0.4 -0.915 23.5-122.3-109.4 135.6 49.8 35.3 4.2 5 6 A V E + B 0 53A 2 18,-2.9 17,-3.5 -2,-0.4 48,-0.2 -0.661 33.8 168.5 -81.7 127.3 49.8 31.6 5.0 6 7 A E + 0 0 91 46,-2.7 2,-0.4 -2,-0.4 47,-0.2 0.597 66.8 33.0-107.3 -25.2 52.3 29.6 3.0 7 8 A Y S S- 0 0 115 45,-1.8 -1,-0.3 13,-0.1 12,-0.1 -0.999 87.1-107.8-137.7 135.5 52.2 26.3 4.9 8 9 A D - 0 0 85 -2,-0.4 2,-0.3 -3,-0.1 12,-0.2 -0.273 36.5-175.0 -56.9 139.5 49.4 24.6 6.8 9 10 A Y B -C 19 0B 19 10,-1.9 10,-2.0 56,-0.0 2,-0.5 -0.984 12.7-151.6-141.3 133.4 49.7 24.6 10.5 10 11 A D - 0 0 92 -2,-0.3 8,-0.2 8,-0.2 7,-0.1 -0.896 26.5-113.1-106.1 131.8 47.4 22.9 13.1 11 12 A A - 0 0 37 -2,-0.5 3,-0.1 1,-0.1 7,-0.1 -0.245 24.5-175.3 -57.3 141.8 47.0 24.3 16.6 12 13 A V S S+ 0 0 91 1,-0.2 2,-0.3 5,-0.1 -1,-0.1 0.478 76.1 35.3-115.2 -13.7 48.4 22.2 19.5 13 14 A H S > S- 0 0 86 4,-0.0 3,-1.8 0, 0.0 -1,-0.2 -0.937 90.3-110.0-133.4 159.4 47.0 24.5 22.2 14 15 A D T 3 S+ 0 0 164 -2,-0.3 -3,-0.0 1,-0.3 0, 0.0 0.535 115.3 58.9 -67.6 -6.9 43.7 26.5 22.3 15 16 A D T 3 S+ 0 0 82 31,-0.1 32,-2.7 2,-0.1 -1,-0.3 0.427 91.0 82.1-102.6 -2.2 45.7 29.8 22.0 16 17 A E B < S-d 47 0C 0 -3,-1.8 2,-0.4 30,-0.3 32,-0.2 -0.617 79.8-117.5 -93.5 160.3 47.3 28.9 18.7 17 18 A L - 0 0 3 30,-2.8 2,-0.6 -2,-0.2 -2,-0.1 -0.823 7.6-139.0 -97.5 142.0 45.6 29.3 15.3 18 19 A T - 0 0 65 -2,-0.4 2,-0.3 -8,-0.2 -8,-0.2 -0.909 38.6-179.4 -91.2 118.6 44.9 26.5 12.8 19 20 A I B -C 9 0B 0 -10,-2.0 -10,-1.9 -2,-0.6 2,-0.4 -0.821 17.3-149.1-127.8 152.6 45.8 28.2 9.5 20 21 A R > - 0 0 97 -2,-0.3 3,-2.7 -12,-0.2 -15,-0.3 -0.983 35.6 -83.8-132.8 142.0 45.7 27.1 5.8 21 22 A V T 3 S+ 0 0 90 -2,-0.4 -15,-0.2 1,-0.3 3,-0.1 -0.028 115.3 20.4 -38.1 125.0 47.8 27.9 2.7 22 23 A G T 3 S+ 0 0 47 -17,-3.5 -1,-0.3 1,-0.3 -16,-0.1 0.145 90.1 128.6 98.8 -21.3 46.5 31.1 1.1 23 24 A E < - 0 0 73 -3,-2.7 -18,-2.9 -19,-0.1 2,-0.5 -0.408 53.4-134.3 -68.9 145.4 44.7 32.6 4.2 24 25 A I E -A 4 0A 76 -20,-0.2 2,-0.5 -2,-0.1 -20,-0.2 -0.890 11.3-154.1-102.5 129.1 45.5 36.1 5.3 25 26 A I E -A 3 0A 0 -22,-3.0 -22,-2.5 -2,-0.5 3,-0.3 -0.923 20.1-142.7-103.1 125.3 46.1 36.7 9.0 26 27 A R E +E 40 0C 147 14,-2.7 14,-2.8 -2,-0.5 -24,-0.2 -0.642 64.0 7.7 -95.6 147.0 45.2 40.3 10.0 27 28 A N E S- 0 0 84 -2,-0.3 2,-0.4 12,-0.2 -25,-0.2 0.944 80.7-166.0 61.1 55.5 46.8 42.8 12.4 28 29 A V E - 0 0 8 -27,-3.4 2,-0.4 -3,-0.3 11,-0.2 -0.643 10.3-169.1 -92.0 126.2 49.8 40.7 13.2 29 30 A K E -E 38 0C 111 9,-3.1 9,-2.3 -2,-0.4 2,-0.3 -0.896 22.1-123.9-117.4 138.5 52.1 41.4 16.1 30 31 A K E -E 37 0C 139 -2,-0.4 7,-0.2 7,-0.2 2,-0.2 -0.649 34.0-152.4 -78.5 134.7 55.6 39.9 16.9 31 32 A L - 0 0 54 5,-1.6 5,-0.2 2,-0.3 4,-0.2 -0.559 26.9-110.3-108.5 170.4 55.7 38.3 20.4 32 33 A Q S S+ 0 0 196 -2,-0.2 2,-0.5 2,-0.1 -1,-0.1 0.903 98.8 87.0 -66.2 -45.5 58.4 37.6 23.1 33 34 A E S > S- 0 0 91 1,-0.1 3,-1.5 2,-0.1 -2,-0.3 -0.481 93.8-123.2 -52.3 108.8 58.2 33.8 22.4 34 35 A E T 3 S+ 0 0 148 -2,-0.5 3,-0.1 1,-0.2 -2,-0.1 -0.428 91.9 23.5 -69.3 132.7 60.7 33.7 19.6 35 36 A G T 3 S+ 0 0 7 1,-0.3 15,-3.0 -4,-0.2 16,-0.3 0.394 104.4 107.5 90.9 1.1 59.4 32.3 16.3 36 37 A W E < - F 0 49C 4 -3,-1.5 -5,-1.6 13,-0.3 -1,-0.3 -0.869 43.6-175.6-120.7 147.6 55.8 33.2 17.2 37 38 A L E -EF 30 48C 0 11,-2.0 11,-1.9 -2,-0.3 2,-0.4 -0.863 14.4-141.9-133.0 162.2 53.3 35.8 16.0 38 39 A E E +EF 29 47C 56 -9,-2.3 -9,-3.1 -2,-0.3 2,-0.3 -0.998 35.7 130.6-134.3 130.4 49.8 36.8 17.0 39 40 A G E - F 0 46C 0 7,-1.9 7,-2.0 -2,-0.4 2,-0.5 -0.925 49.8 -82.2-161.8-175.9 47.0 37.9 14.6 40 41 A E E +EF 26 45C 53 -14,-2.8 -14,-2.7 -2,-0.3 2,-0.4 -0.880 31.8 176.2-112.4 129.6 43.4 37.5 13.6 41 42 A L E > S- F 0 44C 24 3,-3.0 3,-1.6 -2,-0.5 -16,-0.1 -0.973 74.9 -16.0-132.8 120.8 41.9 34.8 11.4 42 43 A N T 3 S- 0 0 162 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.923 131.0 -49.2 51.5 48.0 38.1 34.4 10.7 43 44 A G T 3 S+ 0 0 62 1,-0.2 2,-0.4 -3,-0.0 -1,-0.3 0.142 118.7 106.2 84.5 -21.1 37.4 36.7 13.7 44 45 A R E < - F 0 41C 108 -3,-1.6 -3,-3.0 2,-0.0 2,-0.4 -0.771 56.7-146.6-100.1 138.2 39.7 34.9 16.2 45 46 A R E + F 0 40C 79 -2,-0.4 2,-0.3 -5,-0.3 -5,-0.2 -0.829 37.4 128.7 -98.6 136.0 43.0 36.0 17.6 46 47 A G E - F 0 39C 4 -7,-2.0 -7,-1.9 -2,-0.4 2,-0.3 -0.942 51.7 -81.5-165.2-177.3 45.8 33.5 18.4 47 48 A M E +dF 16 38C 21 -32,-2.7 -30,-2.8 -2,-0.3 -9,-0.2 -0.729 36.2 175.3-105.2 153.0 49.4 32.6 17.9 48 49 A F E - F 0 37C 0 -11,-1.9 -11,-2.0 -2,-0.3 2,-0.1 -0.985 39.6 -90.1-152.7 149.4 51.1 30.9 14.9 49 50 A P E > - F 0 36C 0 0, 0.0 3,-1.4 0, 0.0 -13,-0.3 -0.418 31.1-135.7 -70.1 135.5 54.7 30.0 13.9 50 51 A D G > S+ 0 0 55 -15,-3.0 3,-0.7 1,-0.3 -14,-0.1 0.653 97.3 61.2 -69.2 -17.9 56.4 32.7 11.8 51 52 A N G 3 S+ 0 0 75 -16,-0.3 -1,-0.3 1,-0.2 -15,-0.1 0.343 94.6 63.0 -93.7 9.9 58.0 30.5 9.2 52 53 A F G < S+ 0 0 12 -3,-1.4 -46,-2.7 13,-0.1 -45,-1.8 0.392 108.6 47.8 -98.2 -3.3 54.6 29.1 8.0 53 54 A V E < -B 5 0A 13 -3,-0.7 2,-0.4 -48,-0.2 -48,-0.2 -0.809 67.9-142.8-137.5 165.3 53.7 32.6 6.9 54 55 A K E -B 4 0A 116 -50,-1.9 -50,-2.8 -2,-0.3 2,-0.2 -0.996 27.2-114.2-137.6 132.9 55.1 35.6 5.0 55 56 A E E -B 3 0A 68 -2,-0.4 2,-0.4 -52,-0.2 -52,-0.2 -0.449 29.0-128.3 -65.1 127.5 54.6 39.3 5.7 56 57 A I 0 0 77 -54,-2.4 -54,-0.4 -2,-0.2 -1,-0.1 -0.680 360.0 360.0 -75.6 129.7 52.5 41.1 3.0 57 58 A K 0 0 210 -2,-0.4 -54,-0.0 -56,-0.1 0, 0.0 -0.974 360.0 360.0-133.9 360.0 54.5 44.2 1.9 58 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 59 327 C P 0 0 168 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 177.4 56.8 25.3 26.5 60 328 C L - 0 0 38 3,-0.0 0, 0.0 2,-0.0 0, 0.0 -0.966 360.0-157.5-118.0 122.6 56.4 26.1 22.8 61 329 C P - 0 0 88 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 0.013 30.9-105.1 -74.9-167.4 58.7 24.6 20.1 62 330 C R - 0 0 135 -13,-0.1 -27,-0.1 -12,-0.0 -26,-0.0 -0.815 41.4-131.6-124.7 89.8 59.2 26.2 16.7 63 331 C P - 0 0 23 0, 0.0 2,-0.4 0, 0.0 -12,-0.2 0.071 22.4-119.8 -47.7 149.0 57.2 23.9 14.4 64 332 C R 0 0 223 1,-0.1 -12,-0.0 -12,-0.0 0, 0.0 -0.781 360.0 360.0-103.6 134.3 59.1 22.7 11.3 65 333 C V 0 0 99 -2,-0.4 -13,-0.1 -14,-0.0 -1,-0.1 -0.249 360.0 360.0 -55.7 360.0 58.1 23.4 7.7