==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 18-MAY-01 1J7R . COMPND 2 MOLECULE: CALCIUM VECTOR PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BRANCHIOSTOMA LANCEOLATUM; . AUTHOR I.THERET,S.BALADI,J.A.COX,J.GALLAY,H.SAKAMOTO,C.T.CRAESCU . 77 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5178.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 59.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 41.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 8 A L > 0 0 143 0, 0.0 3,-0.9 0, 0.0 6,-0.1 0.000 360.0 360.0 360.0 147.7 -46.6 -65.2 -46.2 2 9 A G G > - 0 0 40 1,-0.3 3,-0.5 2,-0.2 4,-0.1 -0.627 360.0 -22.8 79.3-132.1 -50.4 -65.2 -46.3 3 10 A P G > S+ 0 0 125 0, 0.0 3,-1.6 0, 0.0 -1,-0.3 0.831 139.8 63.3 -80.2 -31.1 -51.7 -66.7 -49.5 4 11 A E G <> + 0 0 138 -3,-0.9 4,-2.5 1,-0.3 -2,-0.2 0.337 67.1 99.9 -79.1 8.7 -48.4 -65.9 -51.3 5 12 A E H <> S+ 0 0 21 -3,-0.5 4,-2.9 1,-0.2 -1,-0.3 0.819 79.4 63.4 -53.7 -27.3 -46.6 -68.2 -48.9 6 13 A K H <> S+ 0 0 118 -3,-1.6 4,-2.2 2,-0.2 5,-0.3 0.942 101.2 46.6 -60.1 -46.8 -47.0 -70.3 -52.1 7 14 A D H > S+ 0 0 75 1,-0.2 4,-1.9 -4,-0.2 -2,-0.2 0.955 113.8 49.2 -60.1 -44.4 -44.8 -67.7 -53.9 8 15 A E H X S+ 0 0 58 -4,-2.5 4,-2.5 1,-0.2 5,-0.2 0.911 110.7 49.2 -60.4 -42.4 -42.3 -67.9 -51.0 9 16 A C H X S+ 0 0 2 -4,-2.9 4,-1.6 1,-0.2 -1,-0.2 0.850 114.2 43.7 -74.6 -30.6 -42.2 -71.7 -51.0 10 17 A M H < S+ 0 0 77 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.757 110.2 60.3 -76.9 -20.5 -41.6 -71.9 -54.8 11 18 A K H >X S+ 0 0 80 -4,-1.9 4,-2.7 -5,-0.3 3,-1.2 0.922 107.2 42.2 -70.2 -45.5 -39.1 -69.1 -54.3 12 19 A I H 3X>S+ 0 0 1 -4,-2.5 4,-2.7 1,-0.3 5,-1.0 0.910 107.8 61.3 -60.1 -42.3 -37.1 -71.3 -51.9 13 20 A F H 3<5S+ 0 0 13 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.481 110.5 43.0 -60.3 -5.9 -37.8 -74.0 -54.5 14 21 A D H <45S+ 0 0 97 -3,-1.2 -2,-0.2 4,-0.1 -1,-0.2 0.688 119.0 38.5-101.7 -43.2 -35.8 -71.5 -56.7 15 22 A I H ><5S+ 0 0 107 -4,-2.7 3,-0.6 2,-0.2 -3,-0.2 0.953 125.7 36.5 -72.1 -49.1 -33.0 -70.5 -54.4 16 23 A F T 3<5S+ 0 0 23 -4,-2.7 7,-0.3 1,-0.3 -3,-0.2 0.756 113.8 55.9 -81.5 -22.0 -32.4 -73.9 -52.8 17 24 A D T 3>XS- 0 0 8 -5,-1.0 2,-2.1 5,-0.1 4,-0.8 0.526 105.8-145.0 -76.9 -6.3 -33.1 -75.6 -56.1 18 25 A R T <45 - 0 0 96 -3,-0.6 -1,-0.1 -6,-0.3 -4,-0.1 -0.320 53.6 -55.6 87.7 -57.8 -30.3 -73.3 -57.2 19 26 A N T 45S+ 0 0 130 -2,-2.1 -1,-0.2 -6,-0.1 -4,-0.1 -0.082 132.1 4.4 167.7 -51.7 -31.5 -72.5 -60.7 20 27 A A T 45S+ 0 0 78 -3,-0.4 -2,-0.1 -6,-0.0 -6,-0.1 -0.457 101.3 92.8-153.0 79.8 -31.8 -76.0 -62.1 21 28 A E T <5 - 0 0 75 -4,-0.8 -3,-0.2 -7,-0.1 -4,-0.1 0.523 53.7-165.8-133.7 -44.4 -31.1 -78.6 -59.4 22 29 A N < + 0 0 62 -5,-0.7 2,-0.3 -9,-0.2 -5,-0.1 0.851 54.3 99.6 61.6 34.7 -34.5 -79.4 -58.0 23 30 A I + 0 0 72 -7,-0.3 40,-0.3 40,-0.2 -1,-0.1 -0.823 43.1 178.2-151.5 112.8 -33.2 -81.2 -54.9 24 31 A A B -A 62 0A 1 38,-2.6 38,-3.0 -2,-0.3 -7,-0.1 -0.956 15.9-154.0-115.8 126.2 -33.0 -79.5 -51.5 25 32 A P > - 0 0 24 0, 0.0 4,-1.4 0, 0.0 36,-0.2 -0.040 37.1 -85.8 -89.4-170.8 -31.8 -81.6 -48.5 26 33 A V H > S+ 0 0 42 34,-0.4 4,-1.6 2,-0.2 3,-0.3 0.924 126.3 57.9 -59.6 -46.1 -32.5 -81.3 -44.8 27 34 A S H > S+ 0 0 64 1,-0.3 4,-2.3 2,-0.2 3,-0.3 0.911 104.5 52.7 -53.6 -39.7 -29.7 -78.8 -44.3 28 35 A D H > S+ 0 0 19 1,-0.2 4,-1.6 2,-0.2 -1,-0.3 0.884 105.7 54.2 -61.9 -36.5 -31.4 -76.6 -46.8 29 36 A T H X S+ 0 0 1 -4,-1.4 4,-2.4 -3,-0.3 -1,-0.2 0.778 107.5 52.2 -68.6 -22.7 -34.6 -76.9 -44.8 30 37 A M H X S+ 0 0 80 -4,-1.6 4,-1.3 -3,-0.3 5,-0.4 0.977 111.0 43.0 -74.5 -59.7 -32.6 -75.7 -41.7 31 38 A D H X>S+ 0 0 75 -4,-2.3 4,-2.2 3,-0.2 5,-0.7 0.829 119.9 52.2 -50.0 -31.6 -31.3 -72.6 -43.4 32 39 A M H X>S+ 0 0 0 -4,-1.6 4,-1.7 -5,-0.3 5,-1.0 0.996 107.2 41.1 -67.0 -74.1 -34.8 -72.3 -44.8 33 40 A L H <5S+ 0 0 8 -4,-2.4 5,-0.2 1,-0.3 -1,-0.2 0.556 124.2 44.1 -68.8 0.1 -37.2 -72.4 -41.9 34 41 A T H <5S+ 0 0 97 -4,-1.3 -1,-0.3 -5,-0.1 -2,-0.2 0.778 131.8 16.9 -95.5 -49.5 -34.7 -70.2 -40.0 35 42 A K H <5S+ 0 0 132 -4,-2.2 -3,-0.2 -5,-0.4 -2,-0.2 0.908 113.0 65.5 -92.0 -49.4 -33.9 -67.7 -42.8 36 43 A L T < S+ 0 0 166 2,-0.2 4,-1.1 3,-0.1 5,-0.0 0.796 124.8 51.2 -90.0 -30.4 -42.9 -79.0 -32.9 44 51 A E H > S+ 0 0 98 2,-0.2 4,-1.4 1,-0.2 -1,-0.1 0.897 111.4 46.2 -78.1 -38.4 -45.2 -79.8 -35.8 45 52 A T H > S+ 0 0 0 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.728 103.7 64.6 -72.2 -19.7 -43.2 -77.8 -38.3 46 53 A E H > S+ 0 0 30 2,-0.2 4,-2.4 1,-0.2 5,-0.3 0.879 96.8 56.7 -59.5 -37.7 -40.3 -79.6 -36.6 47 54 A A H X S+ 0 0 45 -4,-1.1 4,-2.2 2,-0.2 -2,-0.2 0.940 105.2 50.6 -54.6 -46.9 -42.2 -82.5 -38.2 48 55 A I H X S+ 0 0 1 -4,-1.4 4,-1.6 1,-0.2 3,-0.3 0.983 112.6 45.7 -46.9 -59.9 -41.8 -80.6 -41.5 49 56 A M H < S+ 0 0 32 -4,-2.5 4,-0.4 1,-0.2 -2,-0.2 0.784 116.4 43.2 -65.2 -29.2 -38.1 -80.2 -40.9 50 57 A K H < S+ 0 0 143 -4,-2.4 4,-0.4 1,-0.1 -1,-0.2 0.780 112.1 51.3 -89.6 -24.6 -37.4 -83.8 -39.9 51 58 A E H < S+ 0 0 93 -4,-2.2 -2,-0.2 -3,-0.3 -1,-0.1 0.736 88.0 81.7 -86.0 -20.8 -39.5 -85.6 -42.5 52 59 A A S < S+ 0 0 5 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.1 0.941 91.6 49.7 -49.2 -55.7 -38.0 -83.8 -45.5 53 60 A R S S- 0 0 62 -4,-0.4 -2,-0.1 1,-0.1 3,-0.1 0.955 96.2-135.8 -50.1 -87.3 -34.9 -86.0 -45.7 54 61 A G - 0 0 39 -4,-0.4 -1,-0.1 1,-0.1 -2,-0.0 -0.999 27.9 -59.6 155.3-164.2 -36.0 -89.7 -45.6 55 62 A P S S+ 0 0 137 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.888 125.8 28.9 -94.2 -43.8 -35.3 -93.0 -44.0 56 63 A K S S- 0 0 157 -3,-0.1 -2,-0.1 1,-0.0 -3,-0.0 0.911 81.1-162.2 -83.7 -44.3 -31.8 -93.8 -45.0 57 64 A G + 0 0 26 -4,-0.1 -3,-0.1 1,-0.0 -4,-0.0 0.677 48.9 123.6 74.9 15.6 -30.6 -90.2 -45.3 58 65 A D S S- 0 0 73 1,-0.2 -1,-0.0 0, 0.0 -4,-0.0 0.969 100.3 -15.7 -72.7 -52.6 -27.5 -91.0 -47.5 59 66 A K S S+ 0 0 172 2,-0.0 2,-0.9 -6,-0.0 -1,-0.2 -0.289 91.1 146.8-144.3 55.5 -28.5 -88.7 -50.3 60 67 A K + 0 0 76 2,-0.0 -34,-0.4 -6,-0.0 2,-0.3 -0.795 14.3 157.0 -99.1 103.1 -32.2 -88.0 -49.6 61 68 A N - 0 0 51 -2,-0.9 2,-0.7 -36,-0.2 -8,-0.1 -0.917 42.6-116.5-118.9 154.1 -33.1 -84.5 -50.7 62 69 A I B -A 24 0A 13 -38,-3.0 -38,-2.6 -2,-0.3 -9,-0.1 -0.773 38.2-170.5 -97.6 121.7 -36.5 -83.2 -51.6 63 70 A G > - 0 0 9 -2,-0.7 4,-1.1 -40,-0.3 -40,-0.2 0.267 44.5 -25.5 -93.8-150.8 -36.8 -82.2 -55.2 64 71 A P T 4 S+ 0 0 57 0, 0.0 4,-0.5 0, 0.0 -41,-0.1 0.736 128.4 16.7 -31.1 -55.3 -39.3 -80.4 -57.4 65 72 A E T > S+ 0 0 120 2,-0.1 4,-2.9 -43,-0.1 5,-0.4 0.850 108.1 66.0-104.1 -36.2 -42.6 -81.1 -55.7 66 73 A E H > S+ 0 0 60 1,-0.2 4,-2.9 2,-0.2 5,-0.4 0.904 100.2 55.8 -57.2 -39.3 -42.3 -82.3 -52.0 67 74 A W H X S+ 0 0 1 -4,-1.1 4,-1.5 1,-0.2 -1,-0.2 0.926 116.9 33.3 -67.1 -38.5 -40.9 -79.0 -50.8 68 75 A L H > S+ 0 0 16 -4,-0.5 4,-3.2 2,-0.2 5,-0.3 0.921 119.6 49.4 -81.9 -44.3 -43.8 -76.8 -52.1 69 76 A T H X S+ 0 0 61 -4,-2.9 4,-3.1 2,-0.2 5,-0.2 0.949 114.4 47.0 -59.3 -42.3 -46.6 -79.4 -51.6 70 77 A L H X S+ 0 0 2 -4,-2.9 4,-3.1 -5,-0.4 5,-0.3 0.925 112.2 50.8 -61.7 -40.8 -45.3 -79.9 -48.0 71 78 A C H X S+ 0 0 1 -4,-1.5 4,-1.9 -5,-0.4 5,-0.3 0.907 112.9 45.4 -65.1 -35.0 -45.1 -76.1 -47.6 72 79 A S H X>S+ 0 0 42 -4,-3.2 5,-2.6 2,-0.2 4,-1.1 0.892 113.9 50.0 -73.1 -36.2 -48.7 -75.8 -48.9 73 80 A K H <5S+ 0 0 103 -4,-3.1 -2,-0.2 4,-0.3 -3,-0.2 0.941 116.1 40.7 -63.8 -47.4 -49.8 -78.7 -46.6 74 81 A W H <5S+ 0 0 77 -4,-3.1 -2,-0.2 -5,-0.2 -1,-0.2 0.851 125.0 37.2 -71.3 -31.4 -48.2 -77.2 -43.5 75 82 A V H <5S+ 0 0 51 -4,-1.9 -3,-0.2 -5,-0.3 -2,-0.2 0.966 138.1 6.4 -86.0 -68.0 -49.2 -73.7 -44.4 76 83 A R T <5 0 0 209 -4,-1.1 -3,-0.2 -5,-0.3 -4,-0.1 0.960 360.0 360.0 -82.3 -52.6 -52.7 -73.8 -45.9 77 84 A Q < 0 0 165 -5,-2.6 -4,-0.3 -7,-0.1 -3,-0.1 0.454 360.0 360.0 110.9 360.0 -53.6 -77.6 -45.4