==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 21-MAY-01 1J8E . COMPND 2 MOLECULE: LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.SIMONOVIC,K.DOLMER,W.HUANG,D.K.STRICKLAND,K.VOLZ, . 44 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3269.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 40.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 9.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 20.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 125 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 167.4 -14.6 12.5 17.4 2 2 A S + 0 0 126 3,-0.0 2,-0.0 0, 0.0 3,-0.0 0.596 360.0 103.8 -77.0 -12.1 -13.0 9.0 17.8 3 3 A H S S- 0 0 164 1,-0.1 3,-0.0 2,-0.0 0, 0.0 -0.359 79.2-122.3 -70.1 153.7 -11.0 9.4 14.5 4 4 A S S S+ 0 0 82 1,-0.1 2,-0.3 -2,-0.0 -1,-0.1 0.941 88.2 15.1 -60.7 -53.2 -7.3 10.2 14.8 5 5 A a S S- 0 0 26 4,-0.1 -1,-0.1 1,-0.1 6,-0.1 -0.842 84.7 -98.3-124.9 161.5 -7.3 13.4 12.8 6 6 A S > - 0 0 57 -2,-0.3 3,-1.6 1,-0.1 -1,-0.1 -0.185 43.0-100.1 -71.1 168.6 -9.9 15.9 11.5 7 7 A S T 3 S+ 0 0 120 1,-0.3 -1,-0.1 3,-0.0 -2,-0.0 0.668 122.6 49.3 -64.6 -18.0 -11.3 15.8 8.0 8 8 A T T 3 S+ 0 0 80 2,-0.1 12,-2.5 12,-0.0 2,-0.3 0.159 97.3 92.7-108.8 19.1 -9.0 18.7 6.9 9 9 A Q E < -A 19 0A 70 -3,-1.6 2,-0.4 10,-0.3 -4,-0.1 -0.848 66.9-132.0-118.7 152.1 -5.8 17.2 8.4 10 10 A F E -A 18 0A 37 8,-3.9 8,-2.2 -2,-0.3 2,-0.7 -0.797 25.7-130.8 -95.6 138.1 -2.9 15.1 7.1 11 11 A K E -A 17 0A 121 -2,-0.4 6,-0.2 6,-0.2 5,-0.1 -0.835 20.0-143.7 -96.7 110.6 -2.0 12.1 9.3 12 12 A b > - 0 0 3 4,-3.1 3,-1.7 -2,-0.7 21,-0.0 -0.276 25.0-111.8 -66.8 157.5 1.8 12.0 9.9 13 13 A N T 3 S+ 0 0 138 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.776 120.6 57.4 -62.1 -25.0 3.5 8.6 10.2 14 14 A S T 3 S- 0 0 79 2,-0.1 -1,-0.3 16,-0.1 3,-0.1 0.587 123.1-106.6 -80.5 -11.5 4.1 9.3 13.8 15 15 A G S < S+ 0 0 41 -3,-1.7 -2,-0.1 1,-0.4 2,-0.0 0.238 77.6 135.7 102.7 -12.2 0.3 9.8 14.4 16 16 A R - 0 0 157 14,-0.1 -4,-3.1 -5,-0.1 -1,-0.4 -0.376 48.3-135.8 -67.2 148.5 0.6 13.6 14.6 17 17 A a E +A 11 0A 40 -6,-0.2 -6,-0.2 -13,-0.1 -1,-0.1 -0.875 25.6 173.0-110.8 142.2 -2.0 15.6 12.7 18 18 A I E -A 10 0A 6 -8,-2.2 -8,-3.9 -2,-0.4 5,-0.1 -0.971 45.1 -78.6-143.0 156.5 -1.3 18.7 10.6 19 19 A P E > -A 9 0A 53 0, 0.0 3,-1.8 0, 0.0 -10,-0.3 -0.281 43.4-126.9 -53.2 136.0 -3.3 20.9 8.2 20 20 A E G > S+ 0 0 90 -12,-2.5 3,-1.6 1,-0.3 -11,-0.1 0.836 105.8 63.5 -58.1 -35.4 -3.6 19.0 4.9 21 21 A H G 3 S+ 0 0 163 -13,-0.3 -1,-0.3 1,-0.3 -12,-0.1 0.556 86.4 77.1 -68.5 -3.6 -2.2 22.0 2.8 22 22 A W G X + 0 0 115 -3,-1.8 3,-0.6 4,-0.0 7,-0.3 0.381 68.6 114.8 -86.5 4.1 1.0 21.6 4.7 23 23 A T T < S- 0 0 14 -3,-1.6 13,-0.2 1,-0.2 12,-0.1 -0.506 86.9 -4.5 -76.3 145.1 2.1 18.6 2.6 24 24 A c T 3 S+ 0 0 45 11,-3.3 -1,-0.2 -2,-0.2 12,-0.1 0.875 93.2 128.4 36.0 62.3 5.1 18.9 0.4 25 25 A D S < S- 0 0 68 -3,-0.6 -1,-0.1 2,-0.4 -2,-0.1 0.304 83.1 -94.5-125.7 8.5 5.6 22.6 1.2 26 26 A G S S+ 0 0 64 1,-0.2 2,-0.4 -4,-0.1 10,-0.1 0.260 95.8 96.5 98.4 -13.6 9.2 22.9 2.2 27 27 A D S S- 0 0 98 -5,-0.2 2,-1.8 8,-0.1 -2,-0.4 -0.916 72.3-133.8-114.3 140.2 8.7 22.5 6.0 28 28 A N + 0 0 77 -2,-0.4 3,-0.1 1,-0.2 6,-0.1 -0.626 40.9 162.2 -86.9 76.5 9.0 19.3 8.0 29 29 A D + 0 0 41 -2,-1.8 -1,-0.2 -7,-0.3 -6,-0.1 0.781 69.8 52.3 -70.3 -27.9 5.7 20.0 9.8 30 30 A b S S- 0 0 5 -3,-0.2 -1,-0.2 1,-0.1 -14,-0.1 0.769 98.9-134.7 -78.8 -27.5 5.4 16.4 11.0 31 31 A G S S+ 0 0 61 -3,-0.1 -2,-0.1 -15,-0.0 -1,-0.1 0.104 98.9 67.0 92.8 -23.7 8.9 16.3 12.5 32 32 A D S S- 0 0 64 0, 0.0 -3,-0.1 0, 0.0 -4,-0.0 0.193 108.2-119.3-111.8 12.2 9.4 12.9 10.9 33 33 A Y S > S+ 0 0 134 1,-0.1 3,-1.5 3,-0.0 4,-0.4 0.427 75.9 128.3 66.3 1.9 9.4 14.3 7.3 34 34 A S G > S+ 0 0 2 1,-0.3 3,-0.5 2,-0.2 6,-0.2 0.779 70.5 53.9 -60.8 -25.2 6.4 12.2 6.3 35 35 A D G 3 S+ 0 0 0 1,-0.2 -11,-3.3 -12,-0.1 -1,-0.3 0.689 111.1 47.3 -80.7 -14.4 4.5 15.2 5.0 36 36 A E G < S+ 0 0 16 -3,-1.5 -1,-0.2 -13,-0.2 -2,-0.2 0.300 81.3 129.7-108.3 7.1 7.5 16.1 2.8 37 37 A T S <> S- 0 0 44 -3,-0.5 4,-1.8 -4,-0.4 3,-0.3 -0.171 70.8-113.9 -62.9 157.1 8.2 12.7 1.2 38 38 A H H > S+ 0 0 151 1,-0.2 4,-2.1 2,-0.2 5,-0.2 0.904 116.3 59.8 -56.2 -42.3 8.6 12.3 -2.6 39 39 A A H 4 S+ 0 0 56 1,-0.2 4,-0.4 2,-0.2 -1,-0.2 0.889 105.5 45.7 -54.3 -46.8 5.4 10.2 -2.5 40 40 A N H >4 S+ 0 0 33 -3,-0.3 3,-0.8 1,-0.2 -1,-0.2 0.850 108.5 57.0 -69.3 -33.0 3.3 13.0 -1.1 41 41 A c H >< S+ 0 0 42 -4,-1.8 3,-2.1 1,-0.2 -2,-0.2 0.925 102.3 54.4 -63.1 -43.6 4.7 15.6 -3.5 42 42 A T T 3< S+ 0 0 90 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.641 102.3 60.4 -65.5 -12.7 3.6 13.5 -6.5 43 43 A N T < 0 0 118 -3,-0.8 -1,-0.3 -4,-0.4 -2,-0.2 0.376 360.0 360.0 -93.9 3.3 0.1 13.5 -5.1 44 44 A Q < 0 0 153 -3,-2.1 -1,-0.2 -4,-0.1 -2,-0.1 0.290 360.0 360.0 -92.7 360.0 -0.0 17.3 -5.3