==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 28-MAY-01 1J9O . COMPND 2 MOLECULE: LYMPHOTACTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR E.S.KULOGLU,D.R.MCCASLIN,M.KITABWALLA,C.D.PAUZA,J.L.MARKLEY, . 93 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8570.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 45.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 12.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 15.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 209 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 87.1 -11.7 9.6 13.9 2 2 A G - 0 0 78 2,-0.0 2,-0.2 0, 0.0 0, 0.0 -0.865 360.0-109.2 156.2 172.8 -10.2 6.1 13.5 3 3 A S - 0 0 95 -2,-0.3 2,-0.3 1,-0.0 0, 0.0 -0.658 43.6 -76.1-123.0 178.9 -10.9 2.4 13.5 4 4 A E + 0 0 149 -2,-0.2 2,-0.2 2,-0.0 4,-0.2 -0.630 52.4 175.1 -81.6 133.3 -10.2 -0.6 15.7 5 5 A V + 0 0 108 -2,-0.3 4,-0.0 2,-0.1 -1,-0.0 -0.740 49.6 58.6-129.1 176.6 -6.6 -1.9 15.7 6 6 A S S S+ 0 0 116 -2,-0.2 -1,-0.1 1,-0.1 -2,-0.0 0.040 106.4 60.8 89.3 -25.5 -4.6 -4.5 17.4 7 7 A D S S+ 0 0 143 2,-0.0 -2,-0.1 0, 0.0 -1,-0.1 0.867 89.9 72.0 -95.7 -52.6 -7.1 -7.1 16.2 8 8 A K - 0 0 85 -4,-0.2 4,-0.1 1,-0.1 -2,-0.1 0.142 63.0-157.7 -53.2 179.4 -6.8 -6.8 12.5 9 9 A R S S- 0 0 239 2,-0.8 -1,-0.1 3,-0.1 3,-0.1 0.598 74.6 -18.8-126.9 -62.5 -3.7 -8.1 10.7 10 10 A T S S- 0 0 46 1,-0.3 2,-0.2 2,-0.1 36,-0.2 0.660 125.9 -10.8-120.2 -42.1 -3.2 -6.4 7.3 11 11 A a - 0 0 13 1,-0.2 -2,-0.8 36,-0.1 -1,-0.3 -0.624 70.0 -99.6-140.9-161.8 -6.6 -4.9 6.5 12 12 A V S S- 0 0 111 1,-0.2 -1,-0.2 -2,-0.2 2,-0.1 0.886 84.9 -20.4 -92.8 -78.3 -10.2 -5.0 7.7 13 13 A S S S- 0 0 77 2,-0.3 2,-0.7 35,-0.1 35,-0.6 -0.358 80.0 -76.1-117.8-162.1 -12.2 -7.4 5.5 14 14 A L B S-a 48 0A 68 -2,-0.1 35,-0.3 33,-0.1 2,-0.2 -0.896 85.4 -52.7-108.6 105.1 -11.9 -8.9 2.0 15 15 A T + 0 0 23 33,-3.3 -2,-0.3 -2,-0.7 33,-0.1 -0.451 68.1 144.8 70.1-138.0 -12.7 -6.4 -0.7 16 16 A T + 0 0 129 -2,-0.2 2,-0.3 -3,-0.0 -1,-0.1 0.366 68.1 74.7 82.9 -4.6 -16.1 -4.7 -0.3 17 17 A Q S S- 0 0 81 2,-0.1 2,-1.8 0, 0.0 -2,-0.1 -0.740 72.8-152.3-143.4 89.8 -14.4 -1.6 -1.7 18 18 A R - 0 0 197 -2,-0.3 3,-0.0 1,-0.0 38,-0.0 -0.441 24.6-166.2 -64.6 87.8 -13.8 -1.6 -5.4 19 19 A L - 0 0 54 -2,-1.8 2,-0.4 1,-0.1 -2,-0.1 -0.550 24.1-108.0 -80.1 143.4 -10.8 0.7 -5.4 20 20 A P >> - 0 0 67 0, 0.0 3,-2.7 0, 0.0 4,-1.5 -0.575 14.9-139.6 -75.0 127.0 -9.7 2.2 -8.7 21 21 A V T 34 S+ 0 0 35 -2,-0.4 -2,-0.0 1,-0.3 -3,-0.0 0.837 104.6 67.2 -51.8 -35.0 -6.4 0.7 -9.9 22 22 A S T 34 S+ 0 0 67 1,-0.3 -1,-0.3 19,-0.0 -3,-0.0 0.787 107.4 39.3 -56.5 -28.4 -5.5 4.3 -10.9 23 23 A R T <4 S+ 0 0 171 -3,-2.7 19,-1.9 18,-0.1 20,-0.3 0.703 103.5 86.2 -92.4 -25.4 -5.5 5.0 -7.2 24 24 A I E < -B 41 0A 1 -4,-1.5 17,-0.3 17,-0.2 3,-0.1 -0.495 53.5-174.9 -77.8 146.7 -3.8 1.7 -6.3 25 25 A K E - 0 0 23 15,-3.8 2,-0.2 1,-0.4 16,-0.2 0.807 59.0 -10.9-102.7 -77.1 -0.1 1.5 -6.4 26 26 A T E -B 40 0A 28 14,-0.7 14,-4.1 15,-0.1 -1,-0.4 -0.750 58.3-152.8-124.0 171.1 1.2 -2.0 -5.7 27 27 A Y E -B 39 0A 43 12,-0.3 2,-0.4 -2,-0.2 12,-0.3 -0.959 4.2-151.8-143.9 159.8 -0.3 -5.3 -4.5 28 28 A T E -B 38 0A 76 10,-2.4 10,-3.6 -2,-0.3 2,-0.4 -0.970 8.1-161.2-139.7 120.8 0.7 -8.4 -2.7 29 29 A I E -B 37 0A 67 -2,-0.4 8,-0.2 8,-0.3 2,-0.2 -0.842 10.7-151.8-103.5 137.1 -0.9 -11.8 -3.1 30 30 A T - 0 0 33 6,-2.2 -2,-0.0 -2,-0.4 0, 0.0 -0.655 16.4-167.1-104.6 162.0 -0.4 -14.5 -0.5 31 31 A E + 0 0 160 -2,-0.2 -1,-0.1 4,-0.1 -2,-0.0 0.540 65.0 85.8-119.1 -20.5 -0.5 -18.3 -0.9 32 32 A G S > S- 0 0 48 1,-0.1 3,-0.9 4,-0.1 -2,-0.1 0.069 113.3 -59.5 -70.8-172.9 -0.7 -19.3 2.8 33 33 A S T 3 S+ 0 0 144 1,-0.3 -1,-0.1 2,-0.1 -3,-0.0 0.768 139.7 61.9 -39.6 -29.8 -3.8 -19.6 4.8 34 34 A L T 3 + 0 0 99 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 0.975 67.9 166.0 -62.5 -57.5 -4.2 -16.0 3.9 35 35 A R < + 0 0 151 -3,-0.9 2,-0.3 1,-0.2 -4,-0.1 0.879 33.8 131.2 37.7 55.4 -4.4 -16.6 0.2 36 36 A A - 0 0 1 14,-0.1 -6,-2.2 15,-0.1 2,-0.6 -0.939 61.4-116.3-134.7 155.9 -5.6 -13.1 -0.3 37 37 A V E -BC 29 49A 1 12,-3.4 12,-2.0 -2,-0.3 2,-0.5 -0.838 26.3-152.3 -97.0 122.5 -4.7 -10.2 -2.7 38 38 A I E -BC 28 48A 6 -10,-3.6 -10,-2.4 -2,-0.6 2,-0.5 -0.809 5.8-159.6 -97.1 132.2 -3.3 -7.2 -0.9 39 39 A F E -BC 27 47A 9 8,-2.5 8,-2.3 -2,-0.5 2,-0.5 -0.953 2.8-164.0-116.7 118.4 -3.8 -3.8 -2.6 40 40 A I E -BC 26 46A 43 -14,-4.1 -15,-3.8 -2,-0.5 -14,-0.7 -0.868 8.8-154.3-103.4 130.9 -1.6 -0.9 -1.7 41 41 A T E > -B 24 0A 14 4,-2.4 3,-2.4 -2,-0.5 -17,-0.2 -0.555 32.2-108.0 -99.3 165.7 -2.7 2.6 -2.6 42 42 A K T 3 S+ 0 0 99 -19,-1.9 -18,-0.1 1,-0.3 -1,-0.1 0.735 120.5 66.0 -62.2 -22.2 -0.5 5.7 -3.2 43 43 A R T 3 S- 0 0 216 -20,-0.3 -1,-0.3 2,-0.2 3,-0.1 0.469 120.5-112.4 -77.8 -1.9 -2.0 6.9 0.1 44 44 A G S < S+ 0 0 57 -3,-2.4 2,-0.6 1,-0.3 -2,-0.2 0.510 72.9 142.7 81.8 6.1 -0.1 4.0 1.7 45 45 A L - 0 0 107 -5,-0.0 -4,-2.4 -34,-0.0 2,-0.4 -0.721 32.7-165.3 -84.6 120.0 -3.4 2.4 2.5 46 46 A K E + C 0 40A 92 -2,-0.6 2,-0.3 -6,-0.2 -6,-0.2 -0.894 10.6 174.4-109.6 136.1 -3.2 -1.4 2.1 47 47 A V E - C 0 39A 23 -8,-2.3 -8,-2.5 -2,-0.4 2,-0.3 -0.795 25.0-119.2-131.6 173.2 -6.3 -3.6 1.9 48 48 A a E +aC 14 38A 9 -35,-0.6 -33,-3.3 -2,-0.3 2,-0.3 -0.870 27.1 178.7-117.0 150.5 -7.1 -7.2 1.3 49 49 A A E - C 0 37A 2 -12,-2.0 -12,-3.4 -2,-0.3 -35,-0.1 -0.984 33.3-102.8-149.1 153.9 -9.2 -8.7 -1.4 50 50 A D > - 0 0 71 -2,-0.3 3,-1.5 -14,-0.2 6,-0.2 -0.654 17.6-147.0 -82.1 131.2 -10.4 -12.1 -2.6 51 51 A P T 3 S+ 0 0 36 0, 0.0 -1,-0.1 0, 0.0 6,-0.1 0.439 92.6 79.5 -75.0 0.6 -8.5 -13.5 -5.6 52 52 A Q T 3 S+ 0 0 158 4,-0.1 2,-0.4 5,-0.0 3,-0.1 0.589 70.8 98.8 -81.8 -12.2 -11.8 -15.2 -6.6 53 53 A A <> - 0 0 24 -3,-1.5 4,-2.6 1,-0.2 5,-0.1 -0.659 64.2-154.6 -80.8 126.3 -13.0 -11.8 -7.9 54 54 A T H > S+ 0 0 101 -2,-0.4 4,-2.6 2,-0.2 5,-0.2 0.901 97.9 53.2 -65.1 -42.8 -12.7 -11.6 -11.7 55 55 A W H > S+ 0 0 63 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.860 110.7 49.3 -59.9 -35.9 -12.5 -7.8 -11.5 56 56 A V H > S+ 0 0 0 2,-0.2 4,-3.5 1,-0.2 -2,-0.2 0.934 109.9 48.8 -68.2 -48.0 -9.7 -8.3 -9.0 57 57 A R H X S+ 0 0 172 -4,-2.6 4,-1.6 1,-0.2 -2,-0.2 0.842 112.7 49.9 -59.9 -34.9 -7.9 -10.7 -11.2 58 58 A D H X S+ 0 0 120 -4,-2.6 4,-1.4 2,-0.2 -1,-0.2 0.912 114.2 43.1 -69.6 -44.4 -8.3 -8.3 -14.1 59 59 A V H X S+ 0 0 24 -4,-2.3 4,-4.3 1,-0.2 -2,-0.2 0.862 109.6 58.4 -68.4 -37.0 -7.0 -5.4 -12.0 60 60 A V H X S+ 0 0 21 -4,-3.5 4,-1.6 1,-0.2 -1,-0.2 0.886 103.0 53.7 -58.9 -40.6 -4.2 -7.7 -10.6 61 61 A R H X S+ 0 0 185 -4,-1.6 4,-0.8 1,-0.2 -1,-0.2 0.909 116.4 37.3 -60.2 -44.7 -3.1 -8.2 -14.2 62 62 A S H >X S+ 0 0 54 -4,-1.4 4,-3.4 1,-0.2 3,-1.1 0.913 105.5 67.8 -73.2 -45.3 -2.8 -4.5 -14.8 63 63 A M H 3X S+ 0 0 0 -4,-4.3 4,-2.5 1,-0.3 -1,-0.2 0.842 97.3 55.6 -41.2 -43.2 -1.5 -3.8 -11.3 64 64 A D H 3< S+ 0 0 86 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.911 113.4 40.0 -58.0 -44.9 1.6 -5.6 -12.3 65 65 A R H X< S+ 0 0 189 -3,-1.1 3,-1.6 -4,-0.8 4,-0.4 0.888 111.6 56.4 -71.1 -41.4 2.0 -3.2 -15.3 66 66 A K H 3< S+ 0 0 59 -4,-3.4 -2,-0.2 1,-0.3 -1,-0.2 0.853 126.0 23.5 -58.0 -36.1 0.9 -0.2 -13.2 67 67 A S T 3< S+ 0 0 7 -4,-2.5 4,-0.3 -5,-0.3 -1,-0.3 -0.224 90.2 119.1-123.6 40.5 3.7 -1.1 -10.8 68 68 A N S < S- 0 0 106 -3,-1.6 4,-0.2 2,-0.1 -2,-0.1 0.992 100.1 -3.9 -67.7 -64.3 5.9 -3.0 -13.2 69 69 A T S >> S+ 0 0 102 -4,-0.4 4,-2.2 2,-0.1 3,-1.8 0.709 118.4 84.3-100.3 -29.4 9.0 -0.8 -13.1 70 70 A R H 3> S+ 0 0 117 1,-0.3 4,-1.5 -5,-0.3 -3,-0.1 0.864 80.9 66.8 -38.7 -49.5 7.5 1.9 -10.8 71 71 A N H >4 S+ 0 0 85 -4,-0.3 3,-0.7 1,-0.3 -1,-0.3 0.880 109.3 36.6 -39.1 -51.5 8.4 -0.3 -7.9 72 72 A N H <4 S+ 0 0 120 -3,-1.8 -1,-0.3 1,-0.2 -2,-0.2 0.895 106.0 67.5 -70.0 -41.8 12.1 0.4 -8.8 73 73 A M H 3< S+ 0 0 139 -4,-2.2 2,-0.5 1,-0.1 -1,-0.2 0.695 103.6 55.6 -51.2 -19.2 11.2 3.9 -9.8 74 74 A I << + 0 0 73 -4,-1.5 -1,-0.1 -3,-0.7 2,-0.0 -0.980 56.1 158.7-122.5 126.3 10.6 4.3 -6.1 75 75 A Q - 0 0 146 -2,-0.5 2,-0.1 2,-0.0 -3,-0.1 -0.476 24.1-158.9-144.8 66.7 13.2 3.5 -3.4 76 76 A T - 0 0 133 1,-0.1 -2,-0.1 -2,-0.0 0, 0.0 -0.283 9.6-159.4 -51.6 115.8 12.3 5.3 -0.2 77 77 A K - 0 0 183 -2,-0.1 -1,-0.1 0, 0.0 -2,-0.0 -0.907 6.1-153.4-107.4 110.4 15.6 5.5 1.7 78 78 A P - 0 0 117 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.206 7.5-141.1 -75.0 169.6 15.1 6.1 5.4 79 79 A T - 0 0 116 1,-0.2 3,-0.1 -2,-0.0 0, 0.0 -0.888 8.1-148.5-131.6 161.8 17.6 7.7 7.7 80 80 A G - 0 0 71 1,-0.4 2,-0.3 -2,-0.3 -1,-0.2 0.879 64.3 -32.1 -90.8 -85.2 18.8 7.2 11.3 81 81 A T - 0 0 136 0, 0.0 -1,-0.4 0, 0.0 2,-0.3 -0.842 51.5-136.9-135.8 171.5 19.9 10.4 12.9 82 82 A Q - 0 0 174 -2,-0.3 2,-0.3 -3,-0.1 -3,-0.0 -0.777 12.0-131.9-126.6 170.7 21.4 13.7 12.0 83 83 A Q + 0 0 193 -2,-0.3 2,-0.3 0, 0.0 0, 0.0 -0.822 21.7 173.2-122.8 162.2 24.1 16.1 13.4 84 84 A S - 0 0 111 -2,-0.3 2,-0.1 0, 0.0 -2,-0.0 -0.958 29.9 -97.9-158.4 169.9 24.3 19.8 14.1 85 85 A T - 0 0 122 -2,-0.3 2,-0.1 1,-0.1 0, 0.0 -0.446 43.0 -96.2 -92.3 167.8 26.4 22.5 15.7 86 86 A N - 0 0 139 -2,-0.1 2,-0.2 1,-0.1 -1,-0.1 -0.299 37.3-150.9 -78.4 166.6 26.2 24.0 19.2 87 87 A T - 0 0 128 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.756 13.8-171.1-131.3 177.2 24.3 27.2 19.9 88 88 A A + 0 0 98 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.620 20.7 143.9-176.0 110.0 24.5 30.1 22.3 89 89 A V - 0 0 139 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.867 22.6-163.6-157.6 117.9 22.0 32.9 22.8 90 90 A T - 0 0 142 -2,-0.3 2,-0.5 0, 0.0 -2,-0.0 -0.740 15.4-132.9-104.0 152.4 20.9 34.6 26.0 91 91 A L - 0 0 145 -2,-0.3 -2,-0.0 2,-0.1 0, 0.0 -0.895 30.6-104.8-107.6 132.4 17.8 36.8 26.5 92 92 A T 0 0 131 -2,-0.5 -1,-0.1 1,-0.1 0, 0.0 -0.112 360.0 360.0 -50.6 147.8 18.1 40.1 28.3 93 93 A G 0 0 121 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.596 360.0 360.0 128.9 360.0 16.8 40.1 31.9