==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 1JAB . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3709.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 56.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 24.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 144 0, 0.0 2,-1.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-102.6 19.5 25.4 30.4 2 1 A N + 0 0 87 25,-0.1 2,-0.5 2,-0.0 25,-0.0 -0.063 360.0 143.9 -90.3 47.5 18.1 25.7 26.8 3 2 A Q - 0 0 104 -2,-1.4 25,-0.5 25,-0.1 2,-0.3 -0.671 40.4-144.6 -85.0 124.4 20.7 23.5 25.0 4 3 A A E -A 27 0A 28 -2,-0.5 31,-1.9 23,-0.2 32,-0.3 -0.676 13.8-162.3 -90.9 146.1 19.0 21.5 22.2 5 4 A S E -AB 26 34A 0 21,-3.0 21,-2.0 -2,-0.3 2,-0.4 -0.774 30.4 -91.5-119.7 166.5 19.9 18.0 21.3 6 5 A V E -A 25 0A 0 27,-2.0 50,-2.4 50,-0.3 2,-0.4 -0.675 45.0-171.7 -79.9 128.5 19.3 15.8 18.3 7 6 A V E -AC 24 55A 0 17,-2.5 17,-3.0 -2,-0.4 2,-0.3 -0.963 30.8-104.3-126.0 138.7 16.1 13.7 18.7 8 7 A A E -A 23 0A 0 46,-2.5 45,-2.4 -2,-0.4 15,-0.2 -0.484 25.3-167.2 -65.7 118.6 14.9 10.9 16.5 9 8 A N S S+ 0 0 71 13,-2.9 2,-0.3 -2,-0.3 14,-0.2 0.569 78.8 5.6 -83.6 -12.0 12.1 12.2 14.3 10 9 A Q S S- 0 0 76 12,-0.6 2,-0.3 40,-0.1 43,-0.2 -0.916 104.7 -71.4-154.9 168.1 11.2 8.6 13.3 11 10 A L - 0 0 96 -2,-0.3 38,-0.0 41,-0.1 -2,-0.0 -0.598 48.5-148.5 -65.8 132.2 12.5 5.2 14.4 12 11 A I B -D 50 0B 0 38,-2.8 38,-3.0 -2,-0.3 3,-0.1 -0.950 15.4-132.5-106.7 114.3 16.0 4.9 12.9 13 12 A P > - 0 0 55 0, 0.0 3,-0.9 0, 0.0 33,-0.3 -0.267 32.6 -85.5 -62.7 153.3 16.9 1.2 12.1 14 13 A I T 3 S+ 0 0 95 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.192 110.5 10.4 -54.4 142.8 20.2 -0.4 13.1 15 14 A N T 3 S+ 0 0 81 31,-1.7 2,-0.4 1,-0.2 -1,-0.2 0.841 94.5 135.9 55.0 39.8 23.0 0.2 10.7 16 15 A T < - 0 0 47 -3,-0.9 30,-1.4 30,-0.2 2,-0.2 -0.942 59.3-112.2-121.9 137.6 21.2 2.8 8.6 17 16 A A B -E 45 0C 45 -2,-0.4 28,-0.2 28,-0.2 2,-0.2 -0.537 36.1-114.6 -68.1 130.6 22.7 6.0 7.4 18 17 A L - 0 0 4 26,-2.7 25,-2.8 23,-0.4 2,-0.3 -0.476 33.8-171.8 -68.8 135.9 21.2 9.1 9.0 19 18 A S > - 0 0 40 23,-0.2 3,-1.5 -2,-0.2 4,-0.4 -0.870 37.9-104.8-122.1 164.9 19.3 11.5 6.7 20 19 A L G > S+ 0 0 112 -2,-0.3 3,-1.3 1,-0.3 -1,-0.0 0.847 116.4 61.5 -59.7 -31.3 17.9 15.0 7.5 21 20 A V G 3 S+ 0 0 94 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.729 99.7 58.3 -65.6 -19.7 14.3 13.7 7.8 22 21 A M G < S+ 0 0 20 -3,-1.5 -13,-2.9 1,-0.1 -12,-0.6 0.603 98.1 66.3 -86.5 -9.2 15.3 11.5 10.7 23 22 A M E < +A 8 0A 14 -3,-1.3 2,-0.2 -4,-0.4 -15,-0.2 -0.925 48.7 163.6-126.7 121.8 16.6 14.2 13.0 24 23 A R E -A 7 0A 95 -17,-3.0 -17,-2.5 -2,-0.5 2,-0.4 -0.697 31.9-121.4-115.8 175.5 14.8 17.1 14.7 25 24 A S E +A 6 0A 69 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.964 33.8 161.0-121.8 151.2 16.1 19.2 17.6 26 25 A E E -A 5 0A 81 -21,-2.0 -21,-3.0 -2,-0.4 2,-0.9 -0.989 45.4-106.1-157.7 151.2 14.6 19.6 21.0 27 26 A V E +A 4 0A 85 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.764 58.6 156.8 -86.6 107.9 15.5 20.7 24.5 28 27 A V - 0 0 26 -2,-0.9 4,-0.1 -25,-0.5 -25,-0.1 -0.853 37.6 -98.2-129.7 165.0 15.7 17.5 26.4 29 28 A T S S+ 0 0 135 -2,-0.3 2,-0.2 2,-0.1 26,-0.1 -0.999 100.9 37.7-133.6 132.6 17.3 16.1 29.5 30 29 A P S S- 0 0 92 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.570 99.2-120.4 -65.8 164.0 19.9 14.5 29.6 31 30 A V + 0 0 69 -2,-0.2 -2,-0.1 1,-0.1 2,-0.1 -0.618 36.3 179.8 -78.5 134.9 21.7 16.4 26.9 32 31 A G - 0 0 8 -2,-0.3 25,-0.2 1,-0.3 -1,-0.1 -0.056 51.3 -18.6-110.4-148.6 22.7 14.3 23.8 33 32 A I S S- 0 0 0 23,-3.1 -27,-2.0 -27,-0.2 -1,-0.3 -0.416 83.1-101.6 -59.9 131.9 24.5 15.3 20.6 34 33 A P B > -B 5 0A 33 0, 0.0 3,-2.0 0, 0.0 -29,-0.3 -0.264 21.9-125.4 -55.6 138.2 24.2 19.1 20.0 35 34 A A G > S+ 0 0 24 -31,-1.9 3,-2.0 1,-0.3 -30,-0.1 0.810 107.3 68.5 -53.4 -30.6 21.6 20.2 17.5 36 35 A E G 3 S+ 0 0 154 1,-0.3 4,-0.3 -32,-0.3 -1,-0.3 0.731 90.1 64.4 -62.7 -22.9 24.3 22.1 15.6 37 36 A D G <> + 0 0 18 -3,-2.0 4,-1.7 1,-0.2 3,-0.5 0.506 69.4 102.5 -83.8 3.4 25.9 18.8 14.6 38 37 A I H X> S+ 0 0 25 -3,-2.0 4,-1.0 1,-0.2 3,-0.6 0.919 79.7 49.9 -53.2 -47.8 22.9 17.6 12.6 39 38 A P H 34 S+ 0 0 97 0, 0.0 3,-0.4 0, 0.0 -1,-0.2 0.882 111.1 50.0 -62.4 -30.7 24.6 18.4 9.1 40 39 A R H 34 S+ 0 0 122 -3,-0.5 -2,-0.2 -4,-0.3 -3,-0.1 0.852 103.9 59.2 -78.1 -24.4 27.7 16.5 10.1 41 40 A L H X< S+ 0 0 0 -4,-1.7 3,-2.4 -3,-0.6 -23,-0.4 0.717 76.9 116.8 -74.0 -19.7 25.7 13.5 11.2 42 41 A V T 3< S+ 0 0 55 -4,-1.0 -23,-0.2 -3,-0.4 3,-0.1 -0.332 85.3 9.7 -52.7 128.2 24.2 13.1 7.7 43 42 A S T 3 S+ 0 0 91 -25,-2.8 -1,-0.3 1,-0.3 2,-0.2 0.239 97.4 122.2 79.6 -4.7 25.3 9.7 6.2 44 43 A M < - 0 0 41 -3,-2.4 -26,-2.7 -26,-0.1 -1,-0.3 -0.547 59.3-126.5 -80.8 150.9 26.8 8.4 9.5 45 44 A Q B -E 17 0C 73 17,-0.5 17,-2.9 -28,-0.2 2,-0.3 -0.781 7.4-128.9-101.5 147.2 25.3 5.1 10.8 46 45 A V B -F 61 0D 0 -30,-1.4 -31,-1.7 -2,-0.3 15,-0.2 -0.623 7.0-147.5 -86.2 151.7 23.7 4.2 14.1 47 46 A N S S+ 0 0 61 13,-2.3 2,-0.3 -2,-0.3 14,-0.1 0.345 81.9 27.5-100.5 6.5 24.9 1.1 15.8 48 47 A R S S- 0 0 97 12,-0.4 2,-0.2 -35,-0.1 -33,-0.1 -0.948 97.0 -86.4-156.3 154.6 21.6 0.3 17.4 49 48 A A - 0 0 52 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.519 40.1-151.1 -63.4 139.6 17.9 0.9 16.5 50 49 A V B -D 12 0B 1 -38,-3.0 -38,-2.8 -2,-0.2 -40,-0.1 -0.938 12.5-138.1-117.7 107.7 16.9 4.4 17.8 51 50 A P > - 0 0 70 0, 0.0 3,-2.0 0, 0.0 -43,-0.3 -0.213 37.8 -76.9 -59.8 154.0 13.1 4.6 18.6 52 51 A L T 3 S+ 0 0 114 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.202 118.9 17.9 -48.1 134.4 11.0 7.6 17.8 53 52 A G T 3 S+ 0 0 39 -45,-2.4 2,-0.3 1,-0.3 -1,-0.3 0.517 89.7 138.7 79.5 1.4 11.6 10.5 20.2 54 53 A T < - 0 0 44 -3,-2.0 -46,-2.5 -4,-0.1 2,-0.4 -0.643 57.0-118.9 -77.3 137.8 14.9 9.1 21.6 55 54 A T B -C 7 0A 24 -2,-0.3 2,-0.5 -48,-0.2 -48,-0.3 -0.628 28.4-123.0 -72.4 127.7 17.8 11.6 22.1 56 55 A L - 0 0 0 -50,-2.4 -23,-3.1 -2,-0.4 -50,-0.3 -0.607 30.1-161.2 -72.9 121.9 20.8 10.6 20.0 57 56 A M > - 0 0 39 -2,-0.5 3,-1.9 -25,-0.2 4,-0.4 -0.750 28.5-111.6-102.4 153.5 23.8 10.1 22.2 58 57 A P G > S+ 0 0 65 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.868 115.4 58.3 -52.2 -38.9 27.5 10.1 21.0 59 58 A D G 3 S+ 0 0 97 1,-0.2 -12,-0.0 3,-0.1 -3,-0.0 0.631 97.2 62.8 -70.1 -11.3 27.9 6.4 21.7 60 59 A M G < S+ 0 0 21 -3,-1.9 -13,-2.3 -14,-0.1 2,-0.6 0.582 89.6 74.3 -89.8 -13.9 25.1 5.5 19.3 61 60 A V B X S-F 46 0D 6 -3,-1.2 3,-1.7 -4,-0.4 2,-0.3 -0.891 81.7-128.2-113.3 122.8 26.7 6.9 16.1 62 61 A K T 3 S+ 0 0 90 -17,-2.9 -17,-0.5 -2,-0.6 -2,-0.1 -0.498 93.0 9.7 -67.8 121.7 29.4 5.0 14.5 63 62 A G T 3 S+ 0 0 74 -2,-0.3 2,-0.3 1,-0.3 -1,-0.3 0.479 90.7 144.4 90.9 2.2 32.4 7.2 13.9 64 63 A Y < + 0 0 29 -3,-1.7 2,-0.3 -6,-0.3 -1,-0.3 -0.591 8.1 148.3 -80.0 136.1 31.1 10.1 15.8 65 64 A A 0 0 75 -2,-0.3 0, 0.0 0, 0.0 0, 0.0 -0.906 360.0 360.0-156.9 131.0 33.6 12.3 17.8 66 65 A A 0 0 105 -2,-0.3 -2,-0.0 0, 0.0 -33,-0.0 0.103 360.0 360.0-164.2 360.0 33.0 16.0 18.3