==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 11-JUN-01 1JCP . COMPND 2 MOLECULE: EDAP : ACE-ILE-TRP-GLU-SER-GLY-LYS-LEU-ILE-DAP- . AUTHOR A.PHAN CHAN DU,D.LIMAL,V.SEMETEY,H.DALI,M.JOLIVET, . 12 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1487.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A I 0 0 118 0, 0.0 2,-0.4 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 135.7 5.5 0.4 -0.5 2 3 A W + 0 0 195 1,-0.2 11,-0.0 11,-0.0 0, 0.0 -0.963 360.0 17.4-133.7 113.2 4.6 2.9 2.3 3 4 A G S S+ 0 0 66 -2,-0.4 2,-0.3 1,-0.1 -1,-0.2 0.934 71.0 143.1 91.2 70.0 1.3 2.5 4.3 4 5 A E + 0 0 95 -3,-0.2 2,-0.3 4,-0.1 -1,-0.1 -0.775 16.4 124.9-142.5 90.2 -0.1 -1.1 3.8 5 6 A S S S- 0 0 126 -2,-0.3 2,-0.9 2,-0.2 3,-0.1 -0.792 85.9 -21.6-150.5 99.1 -1.7 -2.7 6.9 6 7 A G S S+ 0 0 87 -2,-0.3 2,-0.2 1,-0.1 -2,-0.0 -0.620 114.8 80.4 102.2 -73.1 -5.4 -4.0 6.5 7 8 A K S S- 0 0 162 -2,-0.9 2,-1.4 1,-0.1 -2,-0.2 -0.522 83.8-123.0 -71.9 132.7 -6.7 -2.1 3.4 8 9 A L 0 0 176 -2,-0.2 -1,-0.1 1,-0.1 -4,-0.1 -0.596 360.0 360.0 -81.8 87.6 -5.6 -3.5 0.0 9 10 A I 0 0 96 -2,-1.4 -1,-0.1 -6,-0.1 -2,-0.1 -0.500 360.0 360.0-142.1 360.0 -3.8 -0.5 -1.6 10 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 12 A T 0 0 164 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 72.6 0.7 0.3 -5.6 12 13 A T 0 0 67 0, 0.0 -9,-0.0 0, 0.0 -3,-0.0 -0.972 360.0 360.0-144.1 126.0 3.5 2.7 -4.3 13 14 A A 0 0 135 -2,-0.3 -11,-0.0 -12,-0.1 0, 0.0 -0.855 360.0 360.0-105.1 360.0 7.2 2.9 -5.6