==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 14-JUN-01 1JDM . COMPND 2 MOLECULE: SARCOLIPIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR G.VEGLIA,A.MASCIONI . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3419.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 61.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 51.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 188 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 74.7 1.2 17.2 -11.4 2 2 A G - 0 0 53 1,-0.1 3,-0.0 3,-0.1 0, 0.0 -0.887 360.0 -13.7-149.2 114.6 -1.0 18.4 -14.2 3 3 A I S S+ 0 0 177 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.987 103.2 100.0 60.8 62.7 -3.5 16.4 -16.3 4 4 A N - 0 0 82 -3,-0.1 -1,-0.1 0, 0.0 -2,-0.1 -0.185 52.5-167.2-174.5 68.3 -2.3 13.0 -15.3 5 5 A T S S+ 0 0 127 1,-0.2 -3,-0.1 2,-0.1 0, 0.0 0.085 70.2 44.7 -52.7 174.0 -4.4 11.2 -12.6 6 6 A R S S+ 0 0 182 1,-0.1 -1,-0.2 2,-0.0 4,-0.0 0.948 76.2 120.1 49.4 58.3 -3.0 8.1 -10.9 7 7 A E S S+ 0 0 69 2,-0.0 -1,-0.1 -6,-0.0 -2,-0.1 0.262 71.8 41.7-131.9 7.5 0.5 9.6 -10.4 8 8 A L S > S+ 0 0 96 2,-0.1 4,-1.8 3,-0.0 5,-0.2 0.170 78.0 104.9-138.1 11.9 0.8 9.5 -6.6 9 9 A F H >> + 0 0 104 1,-0.2 4,-2.6 2,-0.2 5,-0.6 0.798 69.9 70.6 -65.5 -29.7 -0.6 6.0 -5.9 10 10 A L H >5S+ 0 0 86 1,-0.2 4,-1.1 3,-0.2 5,-0.2 0.958 106.9 32.8 -53.2 -58.3 2.9 4.7 -5.4 11 11 A N H >5S+ 0 0 106 3,-0.2 4,-1.5 -3,-0.2 -1,-0.2 0.911 129.7 38.5 -66.9 -43.3 3.4 6.5 -2.1 12 12 A F H X5S+ 0 0 126 -4,-1.8 4,-1.3 2,-0.2 -2,-0.2 0.985 119.4 42.5 -71.3 -62.4 -0.3 6.3 -1.1 13 13 A T H X5S+ 0 0 76 -4,-2.6 4,-1.3 1,-0.2 -3,-0.2 0.695 116.9 51.1 -60.2 -20.0 -1.2 2.8 -2.3 14 14 A I H XS+ 0 0 75 -4,-1.6 4,-1.6 1,-0.2 5,-0.7 0.979 111.6 48.6 -61.6 -61.2 -2.2 -3.7 6.0 21 21 A L H X>S+ 0 0 43 -4,-1.6 5,-0.9 1,-0.2 4,-0.5 0.757 110.7 58.7 -53.4 -23.0 0.3 -6.6 5.2 22 22 A M H X5S+ 0 0 125 -4,-1.2 4,-1.1 3,-0.2 5,-0.5 0.994 103.8 43.8 -69.3 -64.4 2.0 -5.4 8.4 23 23 A W H <5S+ 0 0 215 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.698 141.6 6.2 -56.2 -22.1 -0.7 -5.9 11.0 24 24 A L H X5S+ 0 0 56 -4,-1.6 4,-0.8 -5,-0.2 5,-0.3 0.636 125.7 55.5-135.0 -31.6 -1.6 -9.2 9.4 25 25 A L H <