==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS 15-JUN-01 1JE3 . COMPND 2 MOLECULE: HYPOTHETICAL 8.6 KDA PROTEIN IN AMYA-FLIE . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR A.YEE,P.GUTIERREZ,G.KOZLOV,A.DENISOV,K.GEHRING,C.ARROWSMITH . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8269.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 54.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 14.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 243 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 141.0 -8.2 52.8 -12.0 2 2 A G + 0 0 41 1,-0.1 4,-0.0 3,-0.1 0, 0.0 -0.394 360.0 174.9 -70.6 145.5 -10.5 50.6 -9.9 3 3 A S S S- 0 0 122 -2,-0.1 -1,-0.1 0, 0.0 3,-0.1 0.738 82.4 -3.7-114.5 -53.5 -9.7 49.9 -6.3 4 4 A S S S+ 0 0 103 1,-0.1 2,-0.4 3,-0.0 -2,-0.1 0.219 105.9 97.7-126.9 9.8 -12.6 47.9 -4.8 5 5 A H + 0 0 166 2,-0.1 2,-0.4 0, 0.0 -1,-0.1 -0.249 61.3 102.3 -94.4 45.3 -14.9 48.0 -7.8 6 6 A H - 0 0 152 -2,-0.4 2,-0.7 -3,-0.1 0, 0.0 -0.970 57.7-153.9-134.2 119.0 -13.9 44.5 -9.0 7 7 A H - 0 0 182 -2,-0.4 2,-0.2 2,-0.0 -2,-0.1 -0.816 16.0-146.7 -95.4 112.1 -15.9 41.3 -8.4 8 8 A H - 0 0 163 -2,-0.7 3,-0.1 1,-0.1 -2,-0.0 -0.530 16.5-174.9 -78.1 141.4 -13.7 38.2 -8.3 9 9 A H + 0 0 177 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 0.666 69.3 42.5-106.0 -26.3 -15.2 35.0 -9.7 10 10 A H S S- 0 0 158 2,-0.0 2,-0.4 0, 0.0 -1,-0.1 -0.818 78.4-121.1-121.1 161.3 -12.3 32.6 -8.8 11 11 A S - 0 0 117 -2,-0.3 2,-0.9 -3,-0.1 -2,-0.0 -0.810 17.5-131.5-104.5 143.3 -10.1 32.2 -5.7 12 12 A S + 0 0 131 -2,-0.4 2,-0.8 1,-0.1 -2,-0.0 -0.808 24.6 178.7 -96.2 103.8 -6.3 32.5 -5.7 13 13 A G + 0 0 67 -2,-0.9 2,-0.7 2,-0.0 -1,-0.1 -0.583 12.1 163.7-105.5 70.8 -4.8 29.5 -3.9 14 14 A L + 0 0 154 -2,-0.8 -2,-0.1 2,-0.0 0, 0.0 -0.790 7.4 173.6 -91.9 116.4 -1.0 30.2 -4.2 15 15 A V - 0 0 93 -2,-0.7 2,-0.9 2,-0.0 -2,-0.0 -0.793 17.6-156.6-125.7 88.9 1.0 28.1 -1.7 16 16 A P + 0 0 114 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.511 33.7 152.4 -68.2 102.2 4.8 28.4 -2.3 17 17 A R - 0 0 204 -2,-0.9 4,-0.1 2,-0.2 -2,-0.0 -0.821 54.0-127.6-128.3 167.8 6.2 25.2 -0.8 18 18 A G S S+ 0 0 91 -2,-0.3 2,-0.3 2,-0.1 -1,-0.1 0.597 92.8 54.3 -90.0 -12.5 9.2 23.0 -1.3 19 19 A S S S- 0 0 87 1,-0.1 -2,-0.2 2,-0.0 0, 0.0 -0.769 97.0 -84.9-118.9 164.7 7.1 19.8 -1.6 20 20 A H - 0 0 169 -2,-0.3 -1,-0.1 1,-0.1 -2,-0.1 -0.180 37.9-114.4 -63.6 159.6 4.2 18.8 -3.8 21 21 A M S S+ 0 0 185 -4,-0.1 2,-0.2 2,-0.0 -1,-0.1 0.923 93.6 0.8 -61.5 -46.3 0.7 19.7 -2.9 22 22 A K S S- 0 0 171 0, 0.0 2,-0.5 0, 0.0 -2,-0.1 -0.678 76.5-106.2-131.4-174.6 -0.3 16.1 -2.4 23 23 A N + 0 0 114 -2,-0.2 -2,-0.0 1,-0.1 0, 0.0 -0.938 32.7 163.8-125.6 110.6 1.2 12.6 -2.6 24 24 A I + 0 0 119 -2,-0.5 32,-0.1 1,-0.1 -1,-0.1 0.007 59.1 89.5-110.4 25.6 0.3 10.3 -5.5 25 25 A V + 0 0 40 30,-0.1 31,-1.1 1,-0.1 2,-1.0 0.914 59.0 86.4 -87.1 -51.1 3.2 7.9 -5.0 26 26 A P E -a 56 0A 58 0, 0.0 31,-0.2 0, 0.0 3,-0.1 -0.334 57.2-179.3 -56.4 95.1 1.7 5.3 -2.5 27 27 A D E - 0 0 40 29,-2.0 2,-0.3 -2,-1.0 30,-0.2 0.997 54.1 -15.8 -61.3 -76.0 0.1 3.0 -5.1 28 28 A Y E -a 57 0A 127 28,-1.0 30,-1.8 2,-0.0 2,-0.4 -0.893 50.8-144.2-134.3 164.8 -1.6 0.3 -2.9 29 29 A R E -a 58 0A 141 -2,-0.3 2,-0.7 28,-0.2 30,-0.2 -0.952 9.6-176.4-134.4 114.1 -1.6 -1.1 0.6 30 30 A L E +a 59 0A 12 28,-1.6 30,-1.1 -2,-0.4 2,-0.8 -0.688 19.6 156.6-109.6 77.4 -2.1 -4.8 1.4 31 31 A D + 0 0 69 -2,-0.7 30,-0.2 28,-0.3 28,-0.1 -0.561 48.5 71.0-103.6 67.6 -2.2 -4.9 5.2 32 32 A M S S- 0 0 96 -2,-0.8 30,-0.7 3,-0.0 2,-0.4 0.090 94.1 -35.0-136.5-107.7 -4.1 -8.1 5.9 33 33 A V B -d 62 0B 67 28,-0.3 2,-1.6 -2,-0.0 30,-0.1 -0.996 54.1-107.2-134.9 140.0 -3.0 -11.7 5.3 34 34 A G - 0 0 6 28,-0.7 27,-0.0 -2,-0.4 -3,-0.0 -0.452 44.3-170.1 -66.8 89.1 -0.8 -13.4 2.7 35 35 A E - 0 0 72 -2,-1.6 4,-0.3 1,-0.1 6,-0.2 -0.681 22.0-149.2 -85.8 132.9 -3.5 -15.2 0.8 36 36 A P S S+ 0 0 127 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.784 76.3 89.2 -69.2 -27.8 -2.3 -17.7 -1.9 37 37 A C S S- 0 0 71 1,-0.1 2,-1.4 -3,-0.0 -2,-0.1 -0.533 96.8-104.0 -74.7 134.8 -5.4 -17.0 -4.0 38 38 A P S S+ 0 0 110 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.384 90.8 97.2 -61.1 89.3 -5.0 -14.1 -6.5 39 39 A Y S S+ 0 0 172 -2,-1.4 4,-0.2 -4,-0.3 3,-0.1 0.486 77.1 37.7-140.4 -53.8 -7.0 -11.5 -4.7 40 40 A P S > S+ 0 0 10 0, 0.0 3,-1.7 0, 0.0 4,-0.2 0.998 117.8 42.2 -70.3 -72.6 -4.8 -9.0 -2.6 41 41 A A T >> S+ 0 0 3 1,-0.3 4,-1.6 -6,-0.2 3,-0.9 0.497 85.3 102.7 -55.9 -3.1 -1.7 -8.5 -4.8 42 42 A V H 3> S+ 0 0 62 1,-0.3 4,-1.7 2,-0.2 -1,-0.3 0.816 79.7 53.9 -51.5 -29.0 -4.1 -8.2 -7.7 43 43 A A H <> S+ 0 0 7 -3,-1.7 4,-1.3 2,-0.2 -1,-0.3 0.849 101.1 59.2 -72.8 -36.1 -3.5 -4.5 -7.4 44 44 A T H <> S+ 0 0 3 -3,-0.9 4,-0.9 -4,-0.2 3,-0.3 0.954 109.5 41.1 -57.4 -54.1 0.3 -5.0 -7.6 45 45 A L H >< S+ 0 0 57 -4,-1.6 3,-1.1 1,-0.2 -1,-0.2 0.928 115.4 49.9 -61.3 -47.7 0.2 -6.6 -11.0 46 46 A E H 3X S+ 0 0 103 -4,-1.7 4,-1.3 1,-0.3 -1,-0.2 0.712 103.7 63.6 -64.4 -20.3 -2.4 -4.2 -12.3 47 47 A A H 3< S+ 0 0 1 -4,-1.3 -1,-0.3 -3,-0.3 -2,-0.2 0.797 86.5 72.7 -72.9 -30.2 -0.2 -1.4 -11.0 48 48 A M T X< S+ 0 0 44 -3,-1.1 3,-0.9 -4,-0.9 -1,-0.2 0.932 106.9 32.4 -51.3 -54.8 2.6 -2.4 -13.4 49 49 A P T 34 S+ 0 0 96 0, 0.0 -1,-0.2 0, 0.0 -2,-0.2 0.897 117.4 55.7 -70.6 -39.7 0.7 -1.0 -16.5 50 50 A Q T 3< S+ 0 0 119 -4,-1.3 -2,-0.2 2,-0.0 -3,-0.1 0.352 84.8 144.6 -73.1 7.1 -0.9 1.8 -14.5 51 51 A L < - 0 0 89 -3,-0.9 2,-0.2 -4,-0.2 -3,-0.1 -0.004 26.8-175.0 -46.3 152.1 2.6 2.8 -13.5 52 52 A K - 0 0 100 -27,-0.1 2,-1.0 -28,-0.0 3,-0.2 -0.622 45.5 -68.1-134.9-166.0 3.3 6.5 -13.0 53 53 A K S S+ 0 0 220 1,-0.2 -2,-0.0 -2,-0.2 -28,-0.0 -0.230 122.0 14.0 -85.4 45.7 6.1 8.9 -12.3 54 54 A G S S- 0 0 13 -2,-1.0 2,-0.3 -29,-0.1 -1,-0.2 0.013 72.3-179.0 145.5 103.1 6.4 7.6 -8.8 55 55 A E + 0 0 2 -3,-0.2 42,-1.9 -29,-0.1 2,-0.3 -0.843 3.1 172.2-122.2 158.5 5.0 4.4 -7.3 56 56 A I E -aB 26 96A 54 -31,-1.1 -29,-2.0 -2,-0.3 -28,-1.0 -0.983 9.9-161.0-159.6 154.2 5.0 2.8 -3.8 57 57 A L E -aB 28 95A 6 38,-2.5 38,-0.5 -2,-0.3 2,-0.4 -0.986 5.5-163.1-140.4 154.5 3.4 -0.1 -1.9 58 58 A E E -aB 29 94A 76 -30,-1.8 -28,-1.6 -2,-0.3 2,-0.5 -0.920 11.8-179.7-141.6 112.0 2.9 -1.1 1.6 59 59 A V E +aB 30 93A 2 34,-3.1 34,-1.8 -2,-0.4 2,-0.5 -0.951 8.5 174.8-118.4 123.1 2.0 -4.7 2.5 60 60 A V E + B 0 92A 61 -30,-1.1 2,-0.3 -2,-0.5 32,-0.2 -0.844 26.0 144.6-126.1 90.8 1.4 -5.9 6.1 61 61 A S E - B 0 91A 0 30,-1.5 30,-1.9 -2,-0.5 2,-0.4 -0.867 40.5-130.7-126.4 162.9 0.3 -9.5 6.1 62 62 A D B +d 33 0B 69 -30,-0.7 -28,-0.7 -2,-0.3 28,-0.1 -0.945 29.3 164.3-118.2 132.0 0.7 -12.6 8.2 63 63 A C - 0 0 42 -2,-0.4 -28,-0.1 2,-0.2 -2,-0.0 -0.998 39.0-139.7-147.2 142.5 1.7 -16.0 6.9 64 64 A P S S+ 0 0 134 0, 0.0 -1,-0.1 0, 0.0 26,-0.0 0.760 90.7 63.1 -70.9 -24.9 3.1 -19.3 8.4 65 65 A Q S S- 0 0 136 2,-0.1 -2,-0.2 1,-0.1 3,-0.0 0.049 84.3-125.6 -83.6-163.2 5.4 -19.7 5.5 66 66 A S S S+ 0 0 94 2,-0.1 -1,-0.1 25,-0.0 -3,-0.0 0.586 72.6 106.0-119.8 -24.8 8.3 -17.5 4.4 67 67 A I S S- 0 0 101 1,-0.1 2,-0.5 2,-0.0 -2,-0.1 -0.319 71.4-123.2 -61.7 138.4 7.4 -16.8 0.8 68 68 A N > - 0 0 42 1,-0.2 4,-0.6 2,-0.1 -1,-0.1 -0.733 20.2-165.1 -88.7 127.2 6.1 -13.3 0.1 69 69 A N H >> S+ 0 0 29 -2,-0.5 4,-1.1 2,-0.2 3,-0.6 0.994 83.5 33.6 -72.6 -74.9 2.6 -13.2 -1.5 70 70 A I H >> S+ 0 0 1 1,-0.2 4,-1.4 2,-0.2 3,-1.1 0.913 118.9 52.5 -50.6 -51.8 2.2 -9.6 -2.8 71 71 A P H 3> S+ 0 0 6 0, 0.0 4,-2.4 0, 0.0 -1,-0.2 0.828 101.6 62.3 -55.9 -33.4 5.9 -9.2 -3.7 72 72 A L H S+ 0 0 0 -4,-1.4 4,-2.0 1,-0.2 5,-0.5 0.847 112.6 57.4 -60.6 -35.2 5.2 -7.7 -8.8 75 75 A R H <5S+ 0 0 173 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.856 102.2 56.8 -64.3 -35.6 8.4 -9.8 -9.1 76 76 A N H <5S+ 0 0 130 -4,-1.6 -2,-0.2 -3,-0.4 -1,-0.2 0.989 116.3 31.4 -59.1 -64.6 6.8 -11.9 -11.8 77 77 A H H <5S- 0 0 122 -4,-1.5 -1,-0.2 1,-0.0 -2,-0.2 0.781 118.6-119.2 -65.0 -26.9 6.0 -9.1 -14.2 78 78 A G T <5 - 0 0 40 -4,-2.0 -3,-0.2 -5,-0.3 -2,-0.1 0.875 35.9-169.3 85.4 94.3 9.1 -7.3 -12.9 79 79 A Y < - 0 0 34 -5,-0.5 3,-0.1 1,-0.1 18,-0.1 0.066 34.5 -94.7 -92.1-154.8 8.6 -3.9 -11.3 80 80 A T S S+ 0 0 70 16,-0.3 2,-0.5 1,-0.3 17,-0.2 0.926 100.3 10.5 -90.8 -64.7 11.2 -1.3 -10.3 81 81 A V E +C 96 0A 46 15,-1.8 15,-1.5 2,-0.0 2,-0.5 -0.974 61.1 177.4-125.4 122.5 11.9 -1.9 -6.6 82 82 A L E +C 95 0A 39 -2,-0.5 2,-0.3 13,-0.2 13,-0.2 -0.918 16.2 155.7-126.7 104.6 10.8 -5.0 -4.7 83 83 A D E -C 94 0A 100 11,-2.2 11,-2.6 -2,-0.5 2,-0.3 -0.889 16.9-167.4-127.6 157.9 11.9 -5.3 -1.1 84 84 A I E -C 93 0A 68 -2,-0.3 2,-0.3 9,-0.3 9,-0.3 -0.922 3.1-170.5-139.9 166.1 10.6 -7.1 2.0 85 85 A Q E -C 92 0A 120 7,-1.9 7,-2.4 -2,-0.3 2,-0.3 -0.986 7.4-151.1-154.4 156.7 11.1 -7.2 5.8 86 86 A Q E +C 91 0A 108 -2,-0.3 5,-0.2 5,-0.2 -2,-0.0 -0.916 14.0 173.5-131.8 158.4 10.0 -9.3 8.8 87 87 A D - 0 0 147 3,-1.4 -1,-0.1 -2,-0.3 4,-0.1 0.553 57.8 -61.5-124.0 -79.7 9.4 -8.7 12.5 88 88 A G S S+ 0 0 40 2,-0.2 -1,-0.1 0, 0.0 0, 0.0 0.134 112.2 5.8-140.1-100.3 8.0 -11.6 14.6 89 89 A P S S+ 0 0 125 0, 0.0 2,-0.3 0, 0.0 -26,-0.1 0.306 129.4 41.2 -79.3 10.4 4.6 -13.3 14.2 90 90 A T S S- 0 0 58 -28,-0.1 -3,-1.4 -26,-0.0 2,-0.3 -0.871 70.3-139.0-145.6 177.7 4.0 -11.3 11.0 91 91 A I E -BC 61 86A 18 -30,-1.9 -30,-1.5 -2,-0.3 2,-0.4 -0.997 7.8-163.6-146.8 145.7 5.8 -9.9 7.9 92 92 A R E -BC 60 85A 121 -7,-2.4 -7,-1.9 -2,-0.3 2,-0.3 -0.990 8.4-179.3-136.3 129.9 5.7 -6.7 5.9 93 93 A Y E -BC 59 84A 1 -34,-1.8 -34,-3.1 -2,-0.4 2,-0.3 -0.805 3.0-171.3-123.1 163.1 6.9 -5.9 2.4 94 94 A L E -BC 58 83A 58 -11,-2.6 -11,-2.2 -2,-0.3 2,-0.3 -0.996 5.6-164.7-154.5 152.0 7.1 -2.8 0.3 95 95 A I E +BC 57 82A 7 -38,-0.5 -38,-2.5 -2,-0.3 2,-0.3 -0.897 9.1 178.4-134.6 162.6 7.8 -1.7 -3.3 96 96 A Q E BC 56 81A 101 -15,-1.5 -15,-1.8 -2,-0.3 -16,-0.3 -0.929 360.0 360.0-153.5 177.4 8.6 1.6 -5.1 97 97 A K 0 0 110 -42,-1.9 -1,-0.1 -2,-0.3 -44,-0.1 0.462 360.0 360.0-123.1 360.0 9.4 3.3 -8.4