==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 18-JUN-01 1JEI . COMPND 2 MOLECULE: EMERIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR N.WOLFF,B.GILQUIN,K.COURCHAY,I.CALLEBAUT,S.ZINN-JUSTIN . 53 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4480.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 50.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 15.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 26.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D 0 0 137 0, 0.0 37,-0.0 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 -75.0 -8.2 3.1 8.7 2 2 A N >> + 0 0 79 3,-0.0 4,-1.1 4,-0.0 3,-1.0 0.055 360.0 143.1-179.1 50.5 -10.5 0.5 7.1 3 3 A Y T 34 S+ 0 0 65 1,-0.2 31,-0.1 2,-0.1 8,-0.0 0.147 72.0 66.9 -87.5 25.0 -8.7 -2.7 6.1 4 4 A A T 34 S+ 0 0 90 3,-0.0 -1,-0.2 -3,-0.0 3,-0.0 0.157 106.2 34.6-126.2 16.2 -11.8 -4.7 7.0 5 5 A D T <4 S+ 0 0 139 -3,-1.0 -2,-0.1 2,-0.1 -3,-0.0 0.546 91.9 86.9-134.4 -50.9 -14.1 -3.4 4.3 6 6 A L < - 0 0 16 -4,-1.1 2,-0.2 1,-0.1 3,-0.0 0.018 66.1-144.0 -48.8 166.3 -12.1 -2.7 1.1 7 7 A S > - 0 0 75 -3,-0.0 4,-1.9 1,-0.0 -1,-0.1 -0.447 37.2 -70.5-121.3-165.0 -11.8 -5.8 -1.2 8 8 A D H > S+ 0 0 87 2,-0.2 4,-2.5 1,-0.2 5,-0.4 0.966 126.6 59.1 -59.6 -52.1 -9.0 -7.1 -3.5 9 9 A T H > S+ 0 0 93 1,-0.3 4,-2.4 2,-0.2 5,-0.3 0.930 108.3 46.4 -41.9 -56.4 -9.4 -4.3 -6.1 10 10 A E H > S+ 0 0 85 2,-0.3 4,-0.9 1,-0.2 5,-0.3 0.906 106.3 58.3 -56.8 -40.6 -8.6 -1.7 -3.4 11 11 A L H >X S+ 0 0 0 -4,-1.9 4,-1.3 1,-0.3 3,-0.9 0.967 114.3 37.9 -54.1 -47.1 -5.7 -3.8 -2.2 12 12 A T H 3X S+ 0 0 46 -4,-2.5 4,-1.3 1,-0.3 5,-0.3 0.786 114.2 55.0 -74.3 -23.0 -4.3 -3.4 -5.7 13 13 A T H 3< S+ 0 0 62 -4,-2.4 -1,-0.3 -5,-0.4 -2,-0.2 0.526 118.8 35.6 -84.3 -2.2 -5.7 0.1 -5.8 14 14 A L H << S+ 0 0 35 -4,-0.9 -2,-0.3 -3,-0.9 -1,-0.2 0.444 125.1 40.3-121.7 -11.4 -3.6 0.5 -2.6 15 15 A L H < S+ 0 0 0 -4,-1.3 7,-0.3 -5,-0.3 5,-0.2 0.434 128.8 32.3-114.0 -8.4 -0.7 -1.7 -3.7 16 16 A R S < S+ 0 0 181 -4,-1.3 -3,-0.2 -5,-0.3 -4,-0.1 0.501 111.3 61.6-122.0 -17.0 -0.7 -0.4 -7.3 17 17 A R S S+ 0 0 141 -5,-0.3 -3,-0.1 1,-0.1 -4,-0.1 0.829 118.6 28.5 -84.1 -28.5 -1.8 3.2 -6.7 18 18 A Y S S- 0 0 40 -4,-0.1 -1,-0.1 2,-0.0 -3,-0.1 0.682 110.4-121.5 -99.1 -22.2 1.3 4.1 -4.6 19 19 A N - 0 0 106 1,-0.2 -3,-0.2 2,-0.0 -4,-0.1 0.880 41.4-179.2 83.6 43.0 3.5 1.5 -6.3 20 20 A I - 0 0 12 -5,-0.2 2,-1.6 -6,-0.1 -1,-0.2 -0.511 45.6 -96.1 -73.1 143.5 4.3 -0.5 -3.2 21 21 A P S S+ 0 0 127 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.404 71.6 151.0 -63.1 89.8 6.7 -3.4 -4.0 22 22 A H + 0 0 57 -2,-1.6 3,-0.1 -7,-0.3 -7,-0.0 -0.961 23.6 176.7-125.1 143.5 3.9 -6.0 -4.3 23 23 A G + 0 0 46 -2,-0.4 2,-0.4 1,-0.3 -1,-0.1 0.422 66.6 2.4-109.3-110.0 3.8 -9.2 -6.5 24 24 A P - 0 0 93 0, 0.0 2,-2.2 0, 0.0 -1,-0.3 -0.653 69.6-132.4 -80.6 126.5 0.9 -11.6 -6.3 25 25 A V + 0 0 48 -2,-0.4 2,-0.2 -3,-0.1 5,-0.1 -0.503 48.2 160.1 -79.0 80.8 -1.9 -10.4 -4.0 26 26 A V - 0 0 61 -2,-2.2 -3,-0.0 3,-0.1 0, 0.0 -0.576 54.3-103.0-100.4 166.2 -2.3 -13.8 -2.2 27 27 A G S >> S+ 0 0 62 -2,-0.2 3,-2.1 1,-0.2 4,-0.6 0.968 117.5 51.0 -51.0 -61.9 -3.8 -14.4 1.3 28 28 A S G >4 S+ 0 0 108 1,-0.3 2,-0.9 2,-0.2 3,-0.6 0.942 119.3 34.7 -42.6 -68.2 -0.5 -14.9 3.1 29 29 A T G 34 S+ 0 0 51 1,-0.2 -1,-0.3 -5,-0.1 -2,-0.2 -0.074 94.9 101.0 -82.2 40.6 1.1 -11.6 1.8 30 30 A R G X> S+ 0 0 62 -3,-2.1 4,-1.8 -2,-0.9 3,-0.6 0.909 84.3 36.3 -90.2 -50.0 -2.4 -9.9 1.9 31 31 A R H S+ 0 0 83 -4,-0.5 4,-0.9 1,-0.3 -1,-0.2 0.793 109.4 41.4 -42.1 -25.0 1.7 -7.1 4.6 33 33 A Y H <> S+ 0 0 22 -3,-0.6 4,-1.2 2,-0.2 -1,-0.3 0.853 116.1 45.1 -93.2 -39.0 0.3 -5.0 1.7 34 34 A E H < S+ 0 0 17 -4,-1.8 -2,-0.2 1,-0.2 -3,-0.2 0.442 117.9 49.9 -80.8 3.3 -2.7 -3.6 3.5 35 35 A K H >X S+ 0 0 84 -4,-1.8 3,-1.2 -5,-0.2 4,-0.6 0.693 103.3 52.8-111.6 -28.9 -0.3 -2.9 6.4 36 36 A K H 3X S+ 0 0 116 -4,-0.9 4,-1.7 -5,-0.4 3,-0.3 0.917 98.5 70.3 -69.1 -39.2 2.6 -1.2 4.6 37 37 A I H 3< S+ 0 0 10 -4,-1.2 -1,-0.3 1,-0.2 -2,-0.1 0.374 86.9 71.2 -57.2 4.5 -0.1 1.1 3.3 38 38 A F H X4 S+ 0 0 88 -3,-1.2 3,-1.7 2,-0.1 4,-0.3 0.918 105.3 28.2 -92.2 -63.8 -0.3 2.5 6.9 39 39 A E H >X>S+ 0 0 97 -4,-0.6 5,-2.2 -3,-0.3 3,-1.4 0.839 105.4 80.7 -66.0 -27.4 2.9 4.5 7.5 40 40 A Y T 3<5S+ 0 0 28 -4,-1.7 -1,-0.3 1,-0.3 -3,-0.1 0.773 110.4 23.1 -49.8 -21.6 2.8 5.1 3.8 41 41 A E T <45S+ 0 0 98 -3,-1.7 -1,-0.3 4,-0.1 -2,-0.2 0.283 124.6 49.9-129.5 10.8 0.3 7.8 4.7 42 42 A T T <45S- 0 0 102 -3,-1.4 -2,-0.2 2,-0.4 -3,-0.1 0.261 133.0 -13.4-134.3 15.1 0.9 8.7 8.3 43 43 A Q T <5S+ 0 0 109 -4,-1.2 2,-0.3 1,-0.7 -3,-0.1 0.136 128.6 17.7 178.0 -36.3 4.7 9.4 8.6 44 44 A R < + 0 0 123 -5,-2.2 -1,-0.7 -6,-0.1 -2,-0.4 -0.833 45.3 159.2-141.2 178.6 6.4 8.1 5.4 45 45 A R S S- 0 0 147 -2,-0.3 -5,-0.1 -4,-0.1 -1,-0.1 0.186 78.2 -18.4-169.4 -49.8 5.3 7.1 1.9 46 46 A R + 0 0 145 2,-0.1 -6,-0.0 -6,-0.0 -2,-0.0 0.435 55.1 161.0-137.7 -69.2 8.2 7.2 -0.7 47 47 A L - 0 0 116 2,-0.0 -3,-0.0 1,-0.0 0, 0.0 0.872 39.2-160.6 40.7 40.6 11.3 9.2 0.4 48 48 A S - 0 0 87 1,-0.2 -2,-0.1 2,-0.1 -1,-0.0 0.062 28.8 -84.6 -43.6 166.3 13.1 7.2 -2.3 49 49 A P + 0 0 102 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 -0.717 44.5 179.7 -83.0 109.3 16.9 7.0 -2.1 50 50 A P S S- 0 0 127 0, 0.0 -2,-0.1 0, 0.0 3,-0.0 0.897 81.0 -4.3 -77.4 -44.2 18.3 10.1 -3.8 51 51 A S S S- 0 0 112 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.707 122.6 -52.8-114.5 -71.8 22.0 9.3 -3.2 52 52 A S 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.378 360.0 360.0-136.9 -79.5 22.5 6.2 -1.1 53 53 A S 0 0 183 -4,-0.1 -2,-0.0 -3,-0.0 0, 0.0 0.363 360.0 360.0-158.7 360.0 20.7 5.8 2.3