==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 19-JUN-01 1JEX . COMPND 2 MOLECULE: CYTOCHROME B5; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR N.SHAHZAD,B.DANGI,J.I.BLANKMAN,R.D.GUILES . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5977.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 10.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A V 0 0 123 0, 0.0 2,-0.4 0, 0.0 73,-0.1 0.000 360.0 360.0 360.0 149.5 14.3 14.4 -26.4 2 5 A K - 0 0 158 71,-0.4 2,-1.2 75,-0.0 73,-0.7 -0.751 360.0-132.1 -92.7 135.0 16.4 16.1 -23.8 3 6 A Y + 0 0 124 -2,-0.4 2,-0.5 71,-0.1 73,-0.2 -0.731 33.9 175.4 -89.7 94.6 17.4 14.1 -20.7 4 7 A Y - 0 0 45 -2,-1.2 73,-0.7 71,-0.2 2,-0.1 -0.881 21.9-136.4-105.3 129.8 16.7 16.4 -17.8 5 8 A T >> - 0 0 27 -2,-0.5 3,-4.8 71,-0.3 4,-0.9 -0.387 37.2 -94.4 -79.4 159.1 17.1 15.3 -14.2 6 9 A L H 3> S+ 0 0 31 1,-0.3 4,-3.9 2,-0.2 5,-0.4 0.799 120.4 81.2 -39.8 -33.9 14.6 16.0 -11.5 7 10 A E H 34 S+ 0 0 146 1,-0.2 -1,-0.3 2,-0.2 4,-0.1 0.743 105.1 30.8 -46.1 -24.7 16.9 18.9 -10.9 8 11 A E H X4 S+ 0 0 80 -3,-4.8 3,-2.5 2,-0.1 4,-0.5 0.863 115.9 53.1 -98.9 -57.5 15.0 20.4 -13.7 9 12 A I H >< S+ 0 0 2 -4,-0.9 3,-2.6 1,-0.3 10,-0.3 0.855 103.3 63.1 -46.5 -39.7 11.5 18.9 -13.5 10 13 A Q G >< S+ 0 0 85 -4,-3.9 3,-0.7 1,-0.3 -1,-0.3 0.832 96.9 56.1 -55.1 -34.5 11.6 20.1 -9.9 11 14 A K G < S+ 0 0 166 -3,-2.5 -1,-0.3 -5,-0.4 -2,-0.2 0.550 98.3 66.3 -74.7 -7.5 11.8 23.6 -11.3 12 15 A H G < + 0 0 44 -3,-2.6 7,-1.1 -4,-0.5 -1,-0.3 -0.293 64.7 115.3-107.8 44.8 8.6 22.7 -13.1 13 16 A K B < +A 18 0A 89 -3,-0.7 2,-0.3 5,-0.2 5,-0.2 -0.413 59.5 79.1-109.9 53.1 6.5 22.4 -10.0 14 17 A D S S- 0 0 99 3,-3.4 -3,-0.0 -2,-0.2 16,-0.0 -0.931 90.8 -99.5-149.9 169.7 4.2 25.3 -10.8 15 18 A S S S+ 0 0 56 -2,-0.3 3,-0.3 1,-0.2 18,-0.1 0.951 122.4 52.9 -57.4 -53.9 1.2 26.2 -12.8 16 19 A K S S+ 0 0 181 1,-0.3 2,-0.4 -3,-0.1 -1,-0.2 0.871 130.0 18.0 -49.2 -41.1 3.3 27.9 -15.5 17 20 A S S S+ 0 0 29 -6,-0.1 -3,-3.4 12,-0.0 2,-0.4 -0.923 76.0 155.0-139.7 110.6 5.2 24.7 -15.6 18 21 A T B +A 13 0A 0 -2,-0.4 11,-0.6 -3,-0.3 12,-0.3 -0.950 9.0 166.0-141.0 116.8 3.9 21.4 -14.2 19 22 A W E -B 28 0B 22 -7,-1.1 2,-0.2 -2,-0.4 9,-0.2 -0.565 21.8-148.3-117.5-177.8 5.0 18.0 -15.3 20 23 A V E -B 27 0B 7 7,-0.9 7,-0.8 -2,-0.2 2,-0.4 -0.731 16.5-134.3-160.2 102.8 4.5 14.5 -13.9 21 24 A I E +Bc 26 50B 11 28,-0.9 31,-0.9 25,-0.2 30,-0.8 -0.444 36.3 169.1 -62.0 116.3 7.1 11.7 -14.4 22 25 A L E > -B 25 0B 10 3,-2.6 3,-1.5 -2,-0.4 -2,-0.1 -0.983 64.3 -6.2-137.7 122.7 5.1 8.7 -15.4 23 26 A H T 3 S- 0 0 132 -2,-0.4 -1,-0.1 1,-0.3 3,-0.1 0.860 127.8 -59.9 63.7 36.7 6.6 5.4 -16.7 24 27 A H T 3 S+ 0 0 36 1,-0.2 2,-0.6 57,-0.1 -1,-0.3 0.532 123.9 109.4 68.6 5.0 10.0 7.1 -16.8 25 28 A K E < -B 22 0B 57 -3,-1.5 -3,-2.6 50,-0.2 2,-0.3 -0.956 60.5-151.1-118.4 114.5 8.3 9.5 -19.2 26 29 A V E -B 21 0B 0 -2,-0.6 48,-1.5 -5,-0.3 47,-1.3 -0.661 11.1-156.3 -85.5 136.9 7.6 13.0 -17.9 27 30 A Y E -BD 20 72B 51 -7,-0.8 2,-1.1 -2,-0.3 -7,-0.9 -0.931 13.6-142.5-117.8 139.2 4.7 14.8 -19.4 28 31 A D E > +B 19 0B 43 43,-0.7 3,-0.6 -2,-0.4 4,-0.3 -0.728 34.1 157.5-100.3 83.3 4.1 18.6 -19.6 29 32 A L T 3> + 0 0 23 -2,-1.1 4,-0.5 -11,-0.6 6,-0.2 0.077 40.6 111.8 -91.9 22.4 0.4 18.9 -19.0 30 33 A T T 34 S+ 0 0 31 -12,-0.3 -1,-0.2 2,-0.2 4,-0.2 0.699 82.9 42.4 -67.2 -19.7 1.0 22.5 -17.9 31 34 A K T X4 S+ 0 0 160 -3,-0.6 3,-0.8 2,-0.1 4,-0.2 0.903 120.9 36.7 -90.0 -54.4 -0.9 23.5 -21.0 32 35 A F T 3> S+ 0 0 34 -4,-0.3 4,-0.6 1,-0.2 -2,-0.2 0.326 88.7 104.9 -80.7 7.8 -3.7 21.0 -21.0 33 36 A L T >< S+ 0 0 7 -4,-0.5 3,-0.6 1,-0.3 6,-0.3 0.886 86.9 40.2 -54.0 -41.9 -3.7 21.3 -17.2 34 37 A E T <4 S+ 0 0 172 -3,-0.8 -1,-0.3 1,-0.2 -2,-0.2 0.703 110.2 59.8 -79.4 -21.8 -6.9 23.4 -17.6 35 38 A E T 34 S+ 0 0 144 -4,-0.2 -1,-0.2 -6,-0.2 -2,-0.2 0.458 87.0 98.8 -83.8 -2.4 -8.1 21.1 -20.3 36 39 A H << - 0 0 42 -3,-0.6 7,-0.1 -4,-0.6 -3,-0.0 -0.760 66.9-150.8 -91.1 129.6 -8.0 18.3 -17.7 37 40 A P S S+ 0 0 126 0, 0.0 -1,-0.1 0, 0.0 3,-0.1 0.471 87.5 76.2 -74.9 -1.8 -11.2 17.3 -16.0 38 41 A G S S- 0 0 47 1,-0.3 2,-0.3 -5,-0.1 -4,-0.1 0.991 101.8 -86.2 -70.1 -79.1 -9.1 16.3 -13.0 39 42 A G - 0 0 18 -6,-0.3 -1,-0.3 1,-0.1 -3,-0.2 -0.941 13.9-113.8-173.9-169.6 -8.1 19.6 -11.4 40 43 A E S S+ 0 0 112 -2,-0.3 4,-0.2 -3,-0.1 -1,-0.1 0.468 113.7 37.7-122.3 -14.0 -5.6 22.4 -11.3 41 44 A E S S+ 0 0 120 2,-0.1 4,-0.2 3,-0.1 -2,-0.0 0.367 114.4 54.9-117.0 -2.6 -4.1 21.7 -7.9 42 45 A V S S+ 0 0 69 2,-0.2 4,-0.3 3,-0.1 -2,-0.1 0.701 105.0 51.7-100.2 -29.0 -4.1 17.9 -8.1 43 46 A L S S+ 0 0 14 1,-0.2 3,-0.4 2,-0.2 -2,-0.1 0.862 118.9 36.9 -74.8 -38.0 -2.2 17.8 -11.4 44 47 A R S > S+ 0 0 95 1,-0.2 3,-4.1 -4,-0.2 -1,-0.2 0.734 96.7 82.2 -84.2 -25.7 0.5 20.0 -10.0 45 48 A E T 3 S+ 0 0 109 1,-0.3 -1,-0.2 -4,-0.2 -2,-0.2 0.740 103.1 37.4 -49.9 -23.7 0.3 18.4 -6.6 46 49 A Q T 3 S+ 0 0 40 -3,-0.4 2,-1.7 -4,-0.3 -1,-0.3 0.023 81.3 120.9-116.5 23.3 2.4 15.7 -8.1 47 50 A A S < S+ 0 0 0 -3,-4.1 -27,-0.2 1,-0.2 -3,-0.1 -0.393 80.7 37.2 -85.5 58.1 4.5 18.1 -10.2 48 51 A G S S+ 0 0 11 -2,-1.7 -1,-0.2 1,-0.1 -38,-0.1 0.217 119.5 28.2-170.4 -36.8 7.7 16.9 -8.5 49 52 A G S S- 0 0 25 -3,-0.2 -28,-0.9 -4,-0.1 2,-0.6 0.132 107.3 -44.0-110.8-135.2 7.5 13.2 -7.9 50 53 A D B +c 21 0B 56 1,-0.1 4,-0.3 -30,-0.1 3,-0.2 -0.930 40.3 175.4-109.8 120.2 5.7 10.4 -9.6 51 54 A A >> + 0 0 10 -30,-0.8 4,-5.2 -2,-0.6 3,-0.5 0.603 67.4 88.8 -93.8 -16.4 2.1 11.0 -10.6 52 55 A T H 3> S+ 0 0 31 -31,-0.9 4,-2.5 1,-0.3 -1,-0.2 0.805 86.5 55.5 -49.7 -32.1 1.9 7.7 -12.4 53 56 A E H 3> S+ 0 0 87 -3,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.916 117.7 31.7 -67.9 -45.3 0.7 6.4 -9.0 54 57 A N H <> S+ 0 0 70 -3,-0.5 4,-1.8 -4,-0.3 -2,-0.2 0.819 119.7 54.6 -80.4 -34.0 -2.1 8.8 -8.7 55 58 A F H <>S+ 0 0 58 -4,-5.2 5,-0.7 1,-0.2 4,-0.3 0.878 113.3 41.2 -66.0 -39.8 -2.6 8.9 -12.5 56 59 A E H <5S+ 0 0 112 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.2 0.704 106.9 66.6 -79.7 -21.9 -3.0 5.1 -12.6 57 60 A D H <5S+ 0 0 117 -4,-0.7 -2,-0.2 1,-0.2 -1,-0.2 0.973 101.0 45.0 -61.9 -57.2 -5.1 5.2 -9.4 58 61 A V T <5S- 0 0 92 -4,-1.8 -1,-0.2 1,-0.0 -2,-0.2 0.697 115.6-127.0 -59.9 -18.2 -7.9 7.1 -11.1 59 62 A G T 5 - 0 0 52 -4,-0.3 -3,-0.2 -5,-0.2 2,-0.2 0.996 22.1-142.5 66.6 78.6 -7.4 4.5 -13.8 60 63 A H < - 0 0 50 -5,-0.7 -1,-0.1 1,-0.1 4,-0.1 -0.485 26.8 -97.3 -73.0 139.9 -7.0 6.6 -17.0 61 64 A S > - 0 0 79 -2,-0.2 3,-1.4 1,-0.1 4,-0.2 -0.044 27.8-116.2 -51.8 158.4 -8.6 5.1 -20.1 62 65 A T T 3 S+ 0 0 114 1,-0.3 3,-0.5 2,-0.2 4,-0.2 0.619 117.0 62.0 -73.4 -13.2 -6.3 3.2 -22.4 63 66 A D T 3 S+ 0 0 88 1,-0.2 4,-0.4 2,-0.1 -1,-0.3 0.205 82.1 83.3 -95.4 13.1 -7.1 5.9 -25.0 64 67 A V S <> S+ 0 0 41 -3,-1.4 4,-1.2 2,-0.2 -1,-0.2 0.731 76.5 68.1 -85.4 -25.9 -5.5 8.4 -22.7 65 68 A R T 4 S+ 0 0 176 -3,-0.5 -1,-0.2 1,-0.3 -2,-0.1 0.891 103.3 43.9 -59.3 -42.0 -2.0 7.6 -24.0 66 69 A E T 4 S+ 0 0 95 -4,-0.2 -1,-0.3 1,-0.2 -2,-0.2 0.706 100.5 76.8 -75.3 -21.2 -2.9 9.0 -27.3 67 70 A L T 4 S+ 0 0 105 -4,-0.4 2,-0.5 1,-0.1 -2,-0.2 0.975 95.0 43.2 -50.3 -73.6 -4.4 12.0 -25.5 68 71 A S < + 0 0 17 -4,-1.2 -1,-0.1 1,-0.2 -39,-0.0 -0.676 69.7 124.2 -81.3 121.4 -1.2 13.8 -24.6 69 72 A K S S+ 0 0 124 -2,-0.5 -1,-0.2 3,-0.1 -2,-0.1 0.467 75.6 37.7-138.3 -58.1 1.2 13.8 -27.5 70 73 A T S S+ 0 0 137 1,-0.2 -2,-0.1 3,-0.0 0, 0.0 0.758 115.5 57.7 -73.0 -26.1 2.3 17.3 -28.3 71 74 A Y S S+ 0 0 74 -42,-0.0 -43,-0.7 -44,-0.0 -1,-0.2 0.849 81.5 109.8 -71.8 -36.2 2.3 18.2 -24.7 72 75 A I B -D 27 0B 54 -45,-0.2 -45,-0.2 1,-0.1 -3,-0.1 0.062 51.3-164.7 -38.0 150.8 4.8 15.4 -23.9 73 76 A I - 0 0 27 -47,-1.3 -71,-0.4 1,-0.2 2,-0.3 0.747 38.0-109.4-109.6 -45.5 8.2 16.7 -22.9 74 77 A G - 0 0 5 -48,-1.5 2,-0.2 -73,-0.1 -1,-0.2 -0.847 50.9 -49.4 154.9-112.4 10.4 13.7 -23.2 75 78 A E - 0 0 44 -73,-0.7 -71,-0.2 -2,-0.3 -50,-0.2 -0.799 47.0-117.8-167.0 119.5 11.9 11.7 -20.4 76 79 A L - 0 0 0 -2,-0.2 -71,-0.3 -73,-0.2 5,-0.1 -0.049 65.6 -54.2 -52.6 160.1 14.0 12.8 -17.4 77 80 A H > - 0 0 64 -73,-0.7 4,-1.6 1,-0.2 -1,-0.1 0.005 46.7-136.5 -37.8 139.4 17.5 11.5 -17.1 78 81 A P H > S+ 0 0 51 0, 0.0 4,-0.9 0, 0.0 -1,-0.2 0.707 105.1 54.7 -75.0 -21.5 17.6 7.7 -17.3 79 82 A D H 4 S+ 0 0 117 2,-0.2 -2,-0.1 1,-0.2 4,-0.1 0.852 112.7 40.7 -78.1 -37.6 20.1 7.7 -14.5 80 83 A D H >> S+ 0 0 40 1,-0.2 4,-1.2 2,-0.2 3,-0.9 0.763 106.9 65.0 -79.7 -27.6 17.8 9.7 -12.2 81 84 A R H 3< S+ 0 0 115 -4,-1.6 3,-0.2 1,-0.3 -1,-0.2 0.845 103.4 46.5 -62.4 -35.3 14.9 7.7 -13.5 82 85 A S T 3< S+ 0 0 63 -4,-0.9 -1,-0.3 1,-0.2 3,-0.2 0.500 105.1 63.6 -84.0 -5.5 16.4 4.6 -11.9 83 86 A K T <4 S+ 0 0 165 -3,-0.9 -2,-0.2 1,-0.2 -1,-0.2 0.744 89.6 64.4 -87.1 -27.9 17.0 6.7 -8.8 84 87 A I < 0 0 73 -4,-1.2 -1,-0.2 -3,-0.2 -2,-0.2 0.534 360.0 360.0 -71.7 -5.6 13.3 7.3 -8.2 85 88 A A 0 0 121 -3,-0.2 -1,-0.1 -5,-0.1 -3,-0.1 -0.339 360.0 360.0 -63.9 360.0 13.2 3.5 -7.7