==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE RESPONSE 16-FEB-07 2JGW . COMPND 2 MOLECULE: COMPLEMENT FACTOR H; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.P.HERBERT,J.A.DEAKIN,C.Q.SCHMIDT,B.S.BLAUM,C.EGAN, . 61 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4518.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 62.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 27.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 14.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 386 A L 0 0 173 0, 0.0 2,-1.1 0, 0.0 47,-0.0 0.000 360.0 360.0 360.0 -32.6 18.6 0.1 -3.1 2 387 A R - 0 0 151 46,-0.1 2,-0.1 44,-0.1 21,-0.1 -0.784 360.0-165.9 -97.2 88.6 15.1 -0.3 -4.5 3 388 A K - 0 0 158 -2,-1.1 2,-0.6 19,-0.1 19,-0.2 -0.470 11.1-136.0 -74.4 149.6 13.2 2.4 -2.6 4 389 A a E -A 21 0A 7 17,-3.5 17,-3.3 -2,-0.1 2,-0.4 -0.927 8.1-153.9-117.6 115.0 9.4 2.2 -2.7 5 390 A Y E -A 20 0A 111 -2,-0.6 15,-0.2 15,-0.3 46,-0.2 -0.727 23.5-123.9 -83.5 129.0 7.3 5.3 -3.3 6 391 A F - 0 0 1 13,-2.9 12,-1.6 -2,-0.4 13,-0.3 -0.663 33.9-150.6 -76.0 115.8 3.8 5.1 -1.8 7 392 A P - 0 0 42 0, 0.0 2,-0.6 0, 0.0 11,-0.3 0.149 19.0 -91.2 -75.4-168.9 1.3 5.7 -4.7 8 393 A Y - 0 0 146 9,-0.1 2,-0.4 10,-0.1 3,-0.1 -0.941 27.9-157.0-116.0 114.1 -2.1 7.2 -4.7 9 394 A L > - 0 0 13 -2,-0.6 3,-0.6 1,-0.1 5,-0.3 -0.768 14.4-141.5 -86.1 132.6 -5.2 5.0 -4.4 10 395 A E T 3 S+ 0 0 174 -2,-0.4 -1,-0.1 1,-0.2 4,-0.1 0.928 94.1 16.2 -61.6 -52.7 -8.3 6.7 -5.8 11 396 A N T 3 S+ 0 0 71 46,-0.1 21,-2.0 -3,-0.1 -1,-0.2 -0.058 111.2 91.8-117.2 31.0 -10.8 5.6 -3.3 12 397 A G E < S-B 31 0B 10 -3,-0.6 2,-1.0 19,-0.3 19,-0.3 -0.641 83.7 -97.6-118.5 177.1 -8.6 4.5 -0.4 13 398 A Y E -B 30 0B 122 17,-2.9 2,-2.3 -2,-0.2 17,-0.7 -0.776 31.5-164.5 -98.5 90.9 -7.1 6.1 2.6 14 399 A N > + 0 0 29 -2,-1.0 3,-1.7 -5,-0.3 15,-0.1 -0.507 16.0 171.6 -75.2 76.8 -3.5 7.0 1.6 15 400 A Q T 3 S+ 0 0 89 -2,-2.3 -1,-0.2 1,-0.3 14,-0.1 0.925 82.3 28.5 -51.5 -48.9 -2.3 7.5 5.1 16 401 A N T > S+ 0 0 31 -3,-0.2 3,-1.1 3,-0.1 -1,-0.3 -0.201 87.4 165.7-110.0 38.9 1.3 7.8 3.9 17 402 A H T < + 0 0 87 -3,-1.7 -9,-0.1 1,-0.2 3,-0.1 -0.318 66.7 15.1 -55.0 132.1 0.6 9.2 0.4 18 403 A G T 3 S+ 0 0 42 -12,-1.6 2,-0.4 -11,-0.3 -1,-0.2 0.776 96.4 127.9 78.1 27.9 3.6 10.7 -1.3 19 404 A R < - 0 0 130 -3,-1.1 -13,-2.9 -13,-0.3 2,-0.5 -0.934 51.9-137.0-122.2 140.3 6.2 9.1 1.0 20 405 A K E -A 5 0A 152 -2,-0.4 2,-0.4 -15,-0.2 -15,-0.3 -0.822 18.2-164.8 -98.2 131.0 9.2 7.1 0.1 21 406 A F E -A 4 0A 28 -17,-3.3 -17,-3.5 -2,-0.5 2,-0.2 -0.939 18.9-122.8-117.6 137.7 10.0 3.9 2.1 22 407 A V > - 0 0 74 -2,-0.4 3,-2.0 -19,-0.2 24,-0.3 -0.489 45.7 -84.6 -75.8 144.6 13.3 2.0 2.1 23 408 A Q T 3 S+ 0 0 71 1,-0.3 24,-0.2 -2,-0.2 -1,-0.1 -0.292 118.7 40.1 -49.8 118.9 13.2 -1.6 1.1 24 409 A G T 3 S+ 0 0 66 22,-1.9 -1,-0.3 1,-0.5 2,-0.2 0.217 90.3 107.6 121.0 -13.2 12.4 -3.5 4.3 25 410 A K < - 0 0 116 -3,-2.0 21,-2.1 21,-0.2 -1,-0.5 -0.621 49.7-156.1 -97.6 160.8 9.7 -1.2 5.7 26 411 A S E -C 45 0C 67 19,-0.2 2,-0.3 -2,-0.2 19,-0.2 -0.806 12.2-178.5-133.1 168.4 6.0 -1.8 5.8 27 412 A I E -C 44 0C 21 17,-1.6 17,-3.3 -2,-0.3 2,-0.2 -0.902 25.6-120.4-170.4 135.9 2.7 0.0 6.0 28 413 A D E -C 43 0C 75 15,-0.3 2,-0.5 -2,-0.3 15,-0.3 -0.560 21.2-146.7 -82.9 146.8 -1.0 -0.9 6.2 29 414 A V - 0 0 10 13,-2.3 8,-0.3 -2,-0.2 2,-0.3 -0.957 13.4-172.7-119.4 117.6 -3.5 0.3 3.5 30 415 A A E -B 13 0B 40 -17,-0.7 -17,-2.9 -2,-0.5 2,-0.2 -0.768 6.9-168.7-102.4 151.8 -7.0 1.1 4.4 31 416 A b E -B 12 0B 19 4,-0.4 -19,-0.3 -2,-0.3 3,-0.1 -0.778 32.6 -73.9-130.6 175.9 -9.7 1.8 1.8 32 417 A H S > S- 0 0 65 -21,-2.0 3,-2.3 -2,-0.2 2,-0.4 -0.226 74.7 -66.6 -65.0 163.7 -13.2 3.2 1.6 33 418 A P T 3 S+ 0 0 120 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 -0.349 127.3 25.3 -59.7 111.0 -16.1 0.9 2.8 34 419 A G T 3 S+ 0 0 19 1,-0.5 27,-1.8 -2,-0.4 26,-1.2 0.306 103.3 95.0 117.5 -6.2 -16.3 -2.0 0.4 35 420 A Y E < +D 59 0D 74 -3,-2.3 -1,-0.5 24,-0.3 -4,-0.4 -0.859 42.7 163.6-116.9 152.5 -12.7 -1.9 -0.9 36 421 A A E -D 58 0D 32 22,-3.2 22,-0.7 -2,-0.3 6,-0.1 -0.984 41.2 -84.0-161.5 156.3 -9.7 -4.0 0.3 37 422 A L B >> -E 41 0E 4 4,-0.8 3,-1.0 -8,-0.3 4,-0.6 -0.298 61.3 -84.7 -63.0 148.2 -6.2 -5.0 -0.8 38 423 A P G >4 S+ 0 0 34 0, 0.0 3,-1.0 0, 0.0 -1,-0.1 -0.167 114.2 20.5 -53.5 144.0 -5.8 -8.1 -3.0 39 424 A K G 34 S- 0 0 186 1,-0.2 -2,-0.1 -3,-0.1 0, 0.0 0.769 131.7 -72.4 61.8 28.4 -5.8 -11.5 -1.4 40 425 A A G <4 S+ 0 0 89 -3,-1.0 -1,-0.2 1,-0.2 2,-0.1 0.814 86.8 162.9 59.5 35.3 -7.4 -9.9 1.7 41 426 A Q B << -E 37 0E 82 -3,-1.0 -4,-0.8 -4,-0.6 -1,-0.2 -0.435 30.4-173.4 -81.7 157.9 -4.2 -8.1 2.6 42 427 A T + 0 0 98 1,-0.1 -13,-2.3 -2,-0.1 2,-0.3 0.467 68.6 47.0-123.6 -12.8 -4.2 -5.2 5.1 43 428 A T E -C 28 0C 49 -15,-0.3 2,-0.3 2,-0.0 -15,-0.3 -0.880 58.3-162.0-133.8 157.3 -0.6 -4.2 4.7 44 429 A V E -C 27 0C 0 -17,-3.3 -17,-1.6 -2,-0.3 2,-0.3 -0.997 13.6-177.9-142.3 140.8 2.0 -3.6 2.0 45 430 A T E -C 26 0C 38 -2,-0.3 7,-3.1 -19,-0.2 2,-1.5 -0.950 38.5-107.2-142.4 160.3 5.7 -3.4 2.2 46 431 A a B +F 51 0F 0 -21,-2.1 -22,-1.9 -2,-0.3 5,-0.3 -0.664 44.4 166.2 -85.1 83.1 8.8 -2.8 0.1 47 432 A M - 0 0 115 3,-1.6 -1,-0.2 -2,-1.5 4,-0.1 0.914 65.9 -69.8 -70.6 -43.1 10.0 -6.4 -0.1 48 433 A E S S+ 0 0 129 2,-0.8 3,-0.1 -3,-0.2 -25,-0.1 -0.018 129.2 42.1-175.2 -65.3 12.6 -5.9 -2.8 49 434 A N S S- 0 0 131 1,-0.2 2,-0.3 -45,-0.0 -3,-0.1 0.630 124.5 -79.8 -77.4 -13.0 11.2 -5.2 -6.2 50 435 A G S S+ 0 0 15 -5,-0.1 -3,-1.6 -46,-0.1 -2,-0.8 -0.987 92.1 3.6 150.5-159.0 8.7 -2.9 -4.6 51 436 A W B -F 46 0F 29 -2,-0.3 -5,-0.3 -5,-0.3 -25,-0.1 -0.514 63.8-159.8 -60.9 109.2 5.4 -3.0 -2.7 52 437 A S S S+ 0 0 46 -7,-3.1 -1,-0.2 -2,-0.6 -6,-0.1 0.924 87.6 37.5 -69.8 -51.3 5.0 -6.8 -2.5 53 438 A P S S- 0 0 22 0, 0.0 -1,-0.2 0, 0.0 3,-0.2 0.758 112.5-127.7 -64.1 -23.2 1.2 -7.0 -1.8 54 439 A T - 0 0 55 -9,-0.2 2,-1.8 1,-0.1 -2,-0.1 0.816 15.4-109.4 68.9 110.0 0.8 -4.1 -4.2 55 440 A P S S+ 0 0 8 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.475 71.4 126.3 -75.5 83.4 -1.2 -1.2 -2.7 56 441 A R - 0 0 174 -2,-1.8 2,-2.0 -3,-0.2 -20,-0.1 -0.823 46.7-154.4-140.4 97.3 -4.4 -1.3 -4.7 57 442 A b - 0 0 14 -2,-0.3 -20,-0.3 -20,-0.2 -25,-0.1 -0.508 20.3-168.8 -79.2 82.2 -7.5 -1.5 -2.6 58 443 A I E -D 36 0D 101 -2,-2.0 -22,-3.2 -22,-0.7 2,-0.5 -0.389 37.0 -88.8 -68.4 147.4 -9.9 -3.2 -5.1 59 444 A R E -D 35 0D 165 -24,-0.3 -24,-0.3 1,-0.2 -1,-0.1 -0.455 35.7-166.4 -66.7 113.7 -13.5 -3.3 -4.2 60 445 A V 0 0 102 -26,-1.2 -25,-0.2 -2,-0.5 -1,-0.2 0.705 360.0 360.0 -76.4 -21.7 -14.0 -6.5 -2.2 61 446 A K 0 0 196 -27,-1.8 -1,-0.2 -3,-0.0 -2,-0.1 -0.785 360.0 360.0-103.9 360.0 -17.8 -6.1 -2.6