==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=1-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 2JIA . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3716.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 62.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 24.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 18.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 144 0, 0.0 2,-2.8 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-131.5 19.5 25.4 30.6 2 1 A N + 0 0 86 25,-0.1 2,-0.5 2,-0.0 25,-0.0 0.039 360.0 141.3 -69.2 43.2 18.2 25.6 26.9 3 2 A Q - 0 0 91 -2,-2.8 25,-0.4 25,-0.1 2,-0.3 -0.675 42.2-147.2 -78.7 123.3 20.9 23.4 25.2 4 3 A A - 0 0 25 -2,-0.5 31,-2.2 23,-0.2 32,-0.3 -0.710 11.5-158.5 -93.9 147.1 19.1 21.4 22.6 5 4 A S E -AB 26 34A 0 21,-3.0 21,-1.9 -2,-0.3 2,-0.4 -0.744 29.7 -93.0-117.6 167.1 20.0 17.9 21.6 6 5 A V E -A 25 0A 0 27,-2.1 50,-2.3 50,-0.4 2,-0.4 -0.684 44.4-170.4 -78.7 131.0 19.4 15.7 18.6 7 6 A V E -AC 24 55A 0 17,-2.7 17,-2.8 -2,-0.4 2,-0.3 -0.972 30.6-104.6-126.6 139.8 16.2 13.6 19.1 8 7 A A E -A 23 0A 0 46,-2.7 45,-2.5 -2,-0.4 15,-0.2 -0.468 26.2-167.4 -65.3 120.7 15.0 10.7 16.9 9 8 A N S S+ 0 0 71 13,-2.9 2,-0.3 -2,-0.3 14,-0.2 0.499 77.9 7.3 -90.0 -6.1 12.1 12.0 14.8 10 9 A Q S S- 0 0 75 12,-0.6 2,-0.2 40,-0.1 43,-0.1 -0.926 106.0 -69.8-157.8 167.4 11.3 8.4 13.8 11 10 A L - 0 0 95 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.533 49.6-147.1 -63.5 132.4 12.6 5.0 14.8 12 11 A I B -D 50 0B 0 38,-2.8 38,-3.0 -2,-0.2 3,-0.1 -0.947 14.9-137.3-105.6 113.1 16.2 4.9 13.4 13 12 A P > - 0 0 51 0, 0.0 3,-0.7 0, 0.0 33,-0.4 -0.349 28.6 -89.2 -69.8 153.8 17.0 1.2 12.4 14 13 A I T 3 S+ 0 0 90 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.194 105.4 9.4 -58.1 146.2 20.4 -0.3 13.1 15 14 A N T 3 S+ 0 0 96 31,-1.7 2,-0.4 1,-0.2 -1,-0.2 0.864 94.6 130.3 47.1 48.0 23.1 0.1 10.5 16 15 A T < - 0 0 48 -3,-0.7 30,-0.6 30,-0.3 2,-0.2 -0.997 64.5-108.0-130.7 133.9 21.3 2.6 8.4 17 16 A A B -E 45 0C 44 -2,-0.4 28,-0.2 28,-0.2 2,-0.1 -0.431 38.7-114.7 -62.6 128.6 22.7 5.9 7.3 18 17 A L - 0 0 1 26,-2.9 25,-2.8 23,-0.4 2,-0.3 -0.411 33.6-169.1 -65.1 135.2 21.2 8.9 9.1 19 18 A T > - 0 0 60 23,-0.2 3,-1.4 -2,-0.1 4,-0.4 -0.875 35.6-106.2-120.5 163.3 19.1 11.3 6.9 20 19 A L G > S+ 0 0 113 -2,-0.3 3,-1.4 1,-0.3 -1,-0.0 0.830 115.6 62.1 -59.8 -33.4 17.7 14.7 7.8 21 20 A V G 3 S+ 0 0 98 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.757 98.3 60.8 -66.3 -18.5 14.1 13.5 8.2 22 21 A M G < S+ 0 0 16 -3,-1.4 -13,-2.9 -13,-0.1 -12,-0.6 0.656 98.1 64.4 -82.9 -9.3 15.3 11.2 11.1 23 22 A M E < +A 8 0A 13 -3,-1.4 2,-0.2 -4,-0.4 -15,-0.2 -0.939 50.0 165.6-126.2 125.6 16.6 14.1 13.4 24 23 A R E -A 7 0A 88 -17,-2.8 -17,-2.7 -2,-0.5 2,-0.4 -0.735 31.5-120.0-119.0 171.5 14.8 16.9 15.1 25 24 A S E +A 6 0A 70 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.963 35.7 158.4-118.8 146.3 16.1 19.1 17.9 26 25 A E E -A 5 0A 75 -21,-1.9 -21,-3.0 -2,-0.4 2,-0.9 -0.977 46.2-108.3-154.0 152.7 14.6 19.5 21.4 27 26 A V + 0 0 89 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.791 56.9 157.6 -89.2 106.7 15.7 20.6 24.9 28 27 A V - 0 0 28 -2,-0.9 4,-0.1 -25,-0.4 -25,-0.1 -0.849 36.6 -99.5-126.3 161.3 15.8 17.3 26.7 29 28 A T S S+ 0 0 133 -2,-0.3 2,-0.1 2,-0.1 26,-0.0 -0.991 101.7 40.8-133.8 131.8 17.5 16.1 29.9 30 29 A P S S- 0 0 95 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.428 98.9-122.1 -70.1 159.5 19.9 14.5 30.0 31 30 A V + 0 0 73 -2,-0.1 -2,-0.1 1,-0.1 2,-0.1 -0.514 36.0 177.9 -69.2 134.3 21.7 16.4 27.2 32 31 A G - 0 0 9 1,-0.3 25,-0.2 -2,-0.2 3,-0.1 -0.147 51.4 -18.3-111.7-148.6 22.9 14.3 24.2 33 32 A I S S- 0 0 1 23,-2.9 -27,-2.1 -27,-0.2 -1,-0.3 -0.376 84.7-101.3 -56.2 128.5 24.6 15.2 20.9 34 33 A P B > -B 5 0A 27 0, 0.0 3,-2.2 0, 0.0 -29,-0.3 -0.239 20.2-125.0 -58.3 142.0 24.2 19.0 20.4 35 34 A A G > S+ 0 0 21 -31,-2.2 3,-1.9 1,-0.3 -30,-0.1 0.808 107.7 71.1 -56.1 -27.8 21.5 20.0 17.9 36 35 A E G 3 S+ 0 0 141 -32,-0.3 -1,-0.3 1,-0.3 4,-0.3 0.747 89.9 63.0 -57.3 -29.6 24.2 22.0 16.0 37 36 A D G X> + 0 0 17 -3,-2.2 4,-1.8 1,-0.2 3,-0.5 0.473 67.1 103.8 -84.0 5.3 25.7 18.6 14.9 38 37 A I H <> S+ 0 0 27 -3,-1.9 4,-0.9 1,-0.2 -1,-0.2 0.908 80.8 51.7 -51.2 -47.1 22.7 17.4 12.9 39 38 A P H >4 S+ 0 0 95 0, 0.0 3,-0.6 0, 0.0 -1,-0.2 0.881 109.1 51.1 -53.4 -42.5 24.5 18.2 9.5 40 39 A R H <4 S+ 0 0 113 -3,-0.5 -2,-0.2 -4,-0.3 -3,-0.1 0.899 104.0 59.2 -61.2 -40.7 27.6 16.2 10.6 41 40 A L H >< S+ 0 0 0 -4,-1.8 3,-2.5 -3,-0.2 -23,-0.4 0.687 75.7 119.2 -68.3 -19.8 25.5 13.2 11.5 42 41 A V T << S+ 0 0 53 -4,-0.9 -23,-0.2 -3,-0.6 3,-0.1 -0.264 87.1 4.1 -52.9 130.6 24.1 12.9 8.0 43 42 A S T 3 S+ 0 0 89 -25,-2.8 -1,-0.3 1,-0.3 2,-0.1 0.339 99.1 122.3 62.3 10.7 25.0 9.5 6.6 44 43 A M < - 0 0 47 -3,-2.5 -26,-2.9 -27,-0.1 2,-0.3 -0.447 57.7-129.1 -80.1 165.4 26.7 8.3 9.8 45 44 A Q E -EF 17 62C 81 17,-0.5 17,-2.5 -28,-0.2 2,-0.3 -0.864 5.5-130.6-118.0 154.4 25.2 5.0 11.2 46 45 A V E - F 0 61C 0 -30,-0.6 -31,-1.7 -33,-0.4 -30,-0.3 -0.763 9.5-141.6 -99.7 154.3 23.9 4.1 14.7 47 46 A N S S+ 0 0 66 13,-2.4 2,-0.3 -2,-0.3 14,-0.1 0.362 85.2 30.2 -98.8 7.2 25.0 0.9 16.4 48 47 A R S S- 0 0 100 12,-0.3 2,-0.2 -35,-0.1 -33,-0.1 -0.960 97.6 -89.9-154.2 150.7 21.6 0.1 17.9 49 48 A A - 0 0 55 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.533 40.4-146.2 -63.0 138.4 18.1 0.8 16.8 50 49 A V B -D 12 0B 2 -38,-3.0 -38,-2.8 -2,-0.2 -40,-0.1 -0.936 12.1-136.3-112.8 110.7 16.9 4.2 18.2 51 50 A P > - 0 0 71 0, 0.0 3,-2.0 0, 0.0 -43,-0.3 -0.269 38.4 -79.1 -58.1 150.7 13.1 4.4 19.1 52 51 A L T 3 S+ 0 0 114 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.120 118.6 19.4 -45.5 132.8 11.1 7.5 18.2 53 52 A G T 3 S+ 0 0 37 -45,-2.5 2,-0.3 1,-0.2 -1,-0.3 0.500 89.0 138.6 83.1 -1.0 11.7 10.3 20.7 54 53 A T < - 0 0 46 -3,-2.0 -46,-2.7 1,-0.1 2,-0.4 -0.611 57.6-118.3 -79.3 139.3 15.0 9.0 22.0 55 54 A T B -C 7 0A 24 -2,-0.3 2,-0.5 -48,-0.2 -48,-0.2 -0.660 28.7-123.6 -73.1 127.6 17.9 11.5 22.6 56 55 A L - 0 0 0 -50,-2.3 -23,-2.9 -2,-0.4 -50,-0.4 -0.624 31.1-162.2 -75.3 119.0 20.9 10.6 20.3 57 56 A M >> - 0 0 42 -2,-0.5 3,-2.1 -25,-0.2 4,-0.6 -0.751 28.8-111.9-102.1 151.9 23.9 10.1 22.6 58 57 A P G >4 S+ 0 0 64 0, 0.0 3,-1.0 0, 0.0 6,-0.3 0.854 115.0 58.0 -50.6 -39.4 27.6 10.1 21.4 59 58 A D G 34 S+ 0 0 98 1,-0.2 -12,-0.1 3,-0.1 -3,-0.0 0.572 97.6 62.1 -72.4 -9.3 28.0 6.4 22.1 60 59 A M G <4 S+ 0 0 22 -3,-2.1 -13,-2.4 -14,-0.1 2,-0.6 0.662 89.4 77.3 -88.1 -20.2 25.2 5.4 19.7 61 60 A V E X< S-F 46 0C 7 -3,-1.0 3,-1.6 -4,-0.6 2,-0.4 -0.815 80.2-129.9-104.1 124.2 26.8 6.8 16.6 62 61 A I E 3 S+F 45 0C 82 -17,-2.5 -17,-0.5 -2,-0.6 -2,-0.1 -0.532 93.0 9.4 -69.5 122.0 29.5 4.8 14.9 63 62 A G T 3 S+ 0 0 70 -2,-0.4 2,-0.4 1,-0.3 -1,-0.3 0.454 90.5 145.2 91.2 3.6 32.5 7.1 14.2 64 63 A Y < + 0 0 32 -3,-1.6 2,-0.3 -6,-0.3 -1,-0.3 -0.566 12.1 157.7 -79.4 132.7 31.3 10.1 16.2 65 64 A A 0 0 70 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.955 360.0 360.0-142.2 139.9 33.8 12.2 18.1 66 65 A A 0 0 125 -2,-0.3 -1,-0.1 -33,-0.0 -2,-0.0 0.925 360.0 360.0 -85.1 360.0 32.7 15.9 19.0