==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 11-JUL-01 1JK4 . COMPND 2 MOLECULE: NEUROPHYSIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; . AUTHOR J.P.ROSE,B.-C.WANG . 85 2 8 8 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5021.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 61.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 25 29.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 7 A L 0 0 232 0, 0.0 2,-0.3 0, 0.0 47,-0.1 0.000 360.0 360.0 360.0 110.7 34.2 -30.8 -31.3 2 8 A R - 0 0 75 45,-0.4 47,-2.4 48,-0.0 2,-0.2 -0.988 360.0-125.3-147.5 149.8 31.8 -29.1 -28.9 3 9 A Q - 0 0 75 -2,-0.3 47,-0.2 45,-0.2 2,-0.1 -0.490 47.5 -97.0 -82.5 165.5 31.9 -26.8 -25.9 4 10 A a - 0 0 3 11,-0.6 11,-0.2 1,-0.2 -1,-0.1 -0.402 59.5 -56.9 -83.6 164.4 30.1 -28.1 -22.9 5 11 A L - 0 0 25 9,-0.2 10,-2.3 33,-0.1 -1,-0.2 0.090 60.7-107.4 -38.2 143.0 26.5 -27.2 -21.9 6 12 A P E +A 14 0A 36 0, 0.0 2,-0.3 0, 0.0 8,-0.3 -0.270 47.3 161.7 -70.6 164.6 25.7 -23.5 -21.4 7 13 A b E +A 13 0A 7 6,-2.5 6,-1.4 15,-0.1 28,-0.1 -0.966 24.8 41.4-169.3 177.4 25.2 -22.2 -17.9 8 14 A G S > S+ 0 0 21 26,-0.9 3,-2.7 -2,-0.3 4,-0.1 -0.053 96.0 13.6 68.3-170.8 25.0 -19.1 -15.6 9 15 A P G > S- 0 0 57 0, 0.0 3,-1.5 0, 0.0 4,-0.1 -0.142 140.0 -20.2 -43.3 103.7 23.5 -15.6 -16.3 10 16 A G G 3 S- 0 0 79 1,-0.3 -2,-0.1 2,-0.1 -3,-0.0 0.859 113.8 -72.7 59.2 38.7 21.4 -15.9 -19.3 11 17 A G G < S+ 0 0 40 -3,-2.7 -1,-0.3 1,-0.1 -3,-0.2 0.764 101.0 134.1 48.9 26.5 23.2 -19.1 -20.4 12 18 A K < + 0 0 91 -3,-1.5 12,-0.3 -6,-0.1 -4,-0.2 0.858 55.6 58.2 -72.9 -39.3 26.1 -16.7 -21.3 13 19 A G E S-A 7 0A 2 -6,-1.4 -6,-2.5 10,-0.1 2,-0.3 -0.313 74.5-139.8 -87.8 172.9 28.7 -18.9 -19.6 14 20 A R E -AB 6 22A 108 8,-2.5 8,-2.3 -8,-0.3 2,-0.2 -0.947 21.3 -95.6-136.2 156.3 29.7 -22.5 -20.3 15 21 A c E + B 0 21A 0 -10,-2.3 -11,-0.6 -2,-0.3 6,-0.2 -0.491 31.2 168.9 -74.9 135.2 30.7 -25.6 -18.3 16 22 A F E S+ 0 0 20 4,-2.4 5,-0.1 1,-0.4 -1,-0.1 0.521 75.1 1.2-114.8 -17.7 34.4 -26.5 -17.7 17 23 A G E > S- B 0 20A 0 3,-1.2 3,-1.6 54,-0.1 -1,-0.4 -0.959 88.5 -84.0-160.5 170.1 33.7 -29.2 -15.2 18 24 A P T 3 S+ 0 0 30 0, 0.0 20,-0.2 0, 0.0 21,-0.1 0.826 133.1 22.6 -51.5 -30.9 30.8 -30.9 -13.3 19 25 A S T 3 S+ 0 0 58 51,-0.4 12,-2.7 19,-0.1 2,-0.5 0.062 106.4 93.8-125.4 22.7 30.8 -28.0 -10.9 20 26 A I E < +BC 17 30A 3 -3,-1.6 -4,-2.4 10,-0.2 -3,-1.2 -0.971 39.7 173.4-126.0 121.3 32.5 -25.2 -12.9 21 27 A b E +BC 15 29A 0 8,-2.7 8,-4.5 -2,-0.5 2,-0.3 -0.994 12.1 177.5-124.8 122.1 30.7 -22.6 -14.9 22 28 A d E -BC 14 28A 3 -8,-2.3 -8,-2.5 -2,-0.4 2,-0.3 -0.967 8.6-169.2-129.6 147.5 32.7 -19.7 -16.4 23 29 A G E >> - C 0 27A 3 4,-3.1 4,-3.3 -2,-0.3 3,-0.7 -0.988 31.4-120.8-140.1 145.7 31.9 -16.7 -18.6 24 30 A D T 34 S+ 0 0 119 -2,-0.3 40,-0.6 1,-0.3 -1,-0.1 0.886 118.6 14.5 -42.5 -60.2 33.9 -14.1 -20.6 25 31 A E T 34 S+ 0 0 163 38,-0.1 -1,-0.3 1,-0.1 38,-0.1 0.229 128.6 63.2-103.3 14.0 32.4 -11.1 -18.7 26 32 A L T <4 S- 0 0 60 -3,-0.7 2,-0.3 1,-0.2 -2,-0.2 0.846 85.0-150.2-100.7 -49.0 31.1 -13.3 -16.0 27 33 A G E < -C 23 0A 19 -4,-3.3 -4,-3.1 35,-0.2 2,-0.4 -0.782 42.3 -40.6 105.1-152.5 34.2 -14.9 -14.4 28 34 A d E -C 22 0A 36 -2,-0.3 2,-0.7 -6,-0.3 -6,-0.3 -0.950 37.4-159.9-123.4 134.5 34.0 -18.4 -12.8 29 35 A F E -C 21 0A 39 -8,-4.5 -8,-2.7 -2,-0.4 2,-0.8 -0.921 13.2-171.0-108.3 108.8 31.3 -20.1 -10.7 30 36 A V E S-C 20 0A 86 -2,-0.7 -10,-0.2 -10,-0.2 3,-0.1 -0.900 73.5 -20.8-106.7 101.6 32.9 -22.9 -8.8 31 37 A G S S+ 0 0 60 -12,-2.7 2,-0.2 -2,-0.8 -1,-0.2 0.720 102.7 127.2 75.8 23.9 30.2 -25.0 -7.1 32 38 A T S > S- 0 0 59 -13,-0.2 3,-2.1 -11,-0.1 4,-0.3 -0.502 79.7 -89.3-101.6 174.7 27.5 -22.3 -7.0 33 39 A A G > S+ 0 0 82 1,-0.3 3,-1.6 2,-0.2 4,-0.4 0.833 123.7 65.1 -53.9 -35.5 23.9 -22.5 -8.3 34 40 A E G 3 S+ 0 0 67 1,-0.3 -26,-0.9 2,-0.1 -1,-0.3 0.687 100.7 52.4 -62.0 -19.1 25.1 -21.4 -11.8 35 41 A A G X S+ 0 0 3 -3,-2.1 3,-1.3 1,-0.1 4,-0.4 0.430 80.2 93.9 -98.0 -2.1 27.1 -24.6 -12.1 36 42 A L G X S+ 0 0 132 -3,-1.6 3,-1.7 -4,-0.3 4,-0.3 0.919 82.0 54.4 -56.9 -47.4 24.3 -27.1 -11.2 37 43 A R G > S+ 0 0 105 -4,-0.4 3,-0.7 1,-0.3 -1,-0.3 0.579 91.3 76.8 -65.7 -9.9 23.4 -27.7 -14.9 38 44 A c G X S+ 0 0 0 -3,-1.3 3,-1.3 1,-0.2 4,-0.4 0.711 78.5 71.3 -73.5 -19.6 27.0 -28.6 -15.6 39 45 A Q G X S+ 0 0 85 -3,-1.7 3,-1.6 -4,-0.4 4,-0.4 0.810 82.9 73.0 -63.6 -31.4 26.4 -32.0 -13.9 40 46 A E G X> S+ 0 0 91 -3,-0.7 3,-1.1 -4,-0.3 4,-0.7 0.701 82.3 68.5 -57.1 -24.7 24.3 -32.9 -17.0 41 47 A E G X4 S+ 0 0 0 -3,-1.3 3,-0.8 1,-0.2 -1,-0.3 0.842 86.2 67.5 -64.8 -32.8 27.5 -33.2 -19.1 42 48 A N G <4 S+ 0 0 47 -3,-1.6 -1,-0.2 -4,-0.4 -2,-0.2 0.749 102.1 49.5 -59.1 -22.3 28.4 -36.3 -17.1 43 49 A Y G <4 S+ 0 0 181 -3,-1.1 -1,-0.3 -4,-0.4 -2,-0.2 0.690 90.1 90.2 -90.5 -23.5 25.4 -37.9 -18.8 44 50 A L << - 0 0 54 -3,-0.8 0, 0.0 -4,-0.7 0, 0.0 -0.620 65.5-149.7 -80.1 130.3 26.1 -37.0 -22.4 45 51 A P S S+ 0 0 119 0, 0.0 -1,-0.1 0, 0.0 -4,-0.0 0.865 72.2 87.9 -63.9 -45.1 28.3 -39.6 -24.3 46 52 A S S S- 0 0 56 1,-0.1 2,-0.2 40,-0.0 -2,-0.1 -0.399 82.9-120.3 -63.4 130.6 30.0 -37.1 -26.6 47 53 A P - 0 0 69 0, 0.0 -45,-0.4 0, 0.0 2,-0.3 -0.522 33.8-172.1 -73.6 138.6 33.2 -35.5 -25.2 48 54 A a B -d 82 0B 5 33,-2.2 35,-1.9 -2,-0.2 2,-0.3 -0.877 14.9-171.4-130.0 159.6 33.3 -31.8 -24.8 49 55 A Q - 0 0 76 -47,-2.4 2,-0.2 -2,-0.3 -33,-0.1 -0.914 11.4-154.4-152.9 125.7 35.9 -29.1 -24.0 50 56 A S + 0 0 2 -2,-0.3 2,-0.1 -47,-0.2 -34,-0.0 -0.485 55.8 37.1 -95.0 169.9 35.2 -25.5 -23.3 51 57 A G - 0 0 13 -2,-0.2 11,-0.1 11,-0.1 -2,-0.1 -0.305 63.6-133.1 83.8-171.5 37.5 -22.5 -23.7 52 58 A Q S S+ 0 0 170 9,-0.4 10,-0.1 1,-0.3 -1,-0.1 0.423 78.3 69.4-146.6 -54.3 40.0 -22.1 -26.5 53 59 A K S S- 0 0 119 8,-0.3 8,-2.7 1,-0.0 -1,-0.3 -0.685 75.9-137.7 -83.2 115.3 43.4 -21.0 -25.2 54 60 A P E +E 60 0C 94 0, 0.0 2,-0.3 0, 0.0 6,-0.3 -0.398 31.4 161.9 -71.1 151.7 45.1 -23.8 -23.2 55 61 A e E > -E 59 0C 20 4,-1.8 4,-1.9 13,-0.1 21,-0.0 -0.965 42.6 -5.6-163.2 159.7 46.9 -23.0 -19.9 56 62 A G T 4 S- 0 0 66 -2,-0.3 2,-1.5 2,-0.2 3,-0.1 0.079 117.1 -4.1 47.2-152.6 48.2 -24.8 -16.8 57 63 A S T 4 S- 0 0 111 1,-0.2 -1,-0.1 -3,-0.1 3,-0.1 -0.563 131.8 -45.0 -75.2 88.4 47.5 -28.5 -16.2 58 64 A G T 4 S+ 0 0 64 -2,-1.5 -1,-0.2 1,-0.2 12,-0.2 0.773 105.1 142.5 57.7 30.4 45.2 -29.3 -19.1 59 65 A G E < -E 55 0C 2 -4,-1.9 -4,-1.8 -3,-0.1 2,-0.3 -0.436 42.9-145.0 -99.5 171.0 43.2 -26.2 -18.6 60 66 A R E -EF 54 68C 49 8,-2.5 8,-2.6 -6,-0.3 2,-0.8 -0.939 38.3 -95.0-129.6 149.2 41.6 -23.7 -20.9 61 67 A f E + F 0 67C 26 -8,-2.7 -9,-0.4 -2,-0.3 6,-0.3 -0.615 45.3 179.7 -69.4 108.2 41.3 -20.0 -20.3 62 68 A A E - 0 0 9 4,-2.0 2,-0.3 -2,-0.8 -35,-0.2 0.777 58.8 -21.4 -81.3 -35.6 37.8 -19.8 -18.7 63 69 A A E > S- F 0 66C 11 3,-1.4 3,-1.9 -41,-0.1 2,-0.4 -0.851 103.7 -32.8-156.6-170.5 37.5 -16.1 -18.1 64 70 A A T 3 S- 0 0 80 -40,-0.6 3,-0.1 -41,-0.3 -41,-0.0 -0.425 129.3 -13.7 -61.5 115.4 39.7 -13.0 -17.7 65 71 A G T 3 S+ 0 0 19 -2,-0.4 11,-1.4 1,-0.2 2,-0.4 0.710 113.2 118.2 64.7 18.6 42.9 -14.1 -16.1 66 72 A I E < -FG 63 75C 42 -3,-1.9 -4,-2.0 9,-0.2 -3,-1.4 -0.974 43.3-169.9-126.8 128.1 41.4 -17.4 -15.1 67 73 A e E +FG 61 74C 12 7,-2.9 7,-2.6 -2,-0.4 2,-0.3 -0.929 14.6 176.0-112.3 129.8 42.4 -20.9 -16.2 68 74 A g E -FG 60 73C 2 -8,-2.6 -8,-2.5 -2,-0.4 5,-0.2 -0.979 16.9-175.0-137.9 148.1 40.2 -23.9 -15.5 69 75 A N - 0 0 28 3,-2.2 3,-0.3 -2,-0.3 -10,-0.1 -0.484 61.1 -68.9-117.0-165.4 40.1 -27.6 -16.2 70 76 A D S S+ 0 0 39 1,-0.2 -51,-0.4 -12,-0.2 -50,-0.1 0.542 130.7 23.1 -69.5 -2.2 37.3 -30.0 -15.2 71 77 A E S S+ 0 0 149 1,-0.3 2,-0.3 -54,-0.1 -1,-0.2 0.424 119.0 33.5-142.0 -2.1 38.0 -29.7 -11.5 72 78 A S - 0 0 46 -3,-0.3 -3,-2.2 -56,-0.1 2,-0.4 -0.995 48.5-152.5-157.9 160.6 39.8 -26.5 -10.7 73 79 A g E +G 68 0C 39 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.990 18.5 176.7-135.9 140.2 40.4 -22.9 -11.5 74 80 A V E -G 67 0C 96 -7,-2.6 -7,-2.9 -2,-0.4 2,-0.5 -0.965 37.3 -99.3-142.4 158.7 43.5 -20.8 -11.0 75 81 A T E +G 66 0C 120 -2,-0.3 -9,-0.2 -9,-0.2 -10,-0.1 -0.687 42.2 171.6 -80.0 116.3 44.8 -17.3 -11.7 76 82 A E > - 0 0 54 -11,-1.4 3,-2.4 -2,-0.5 -11,-0.1 -0.932 27.3-152.1-131.3 109.1 47.0 -17.3 -14.8 77 83 A P T 3 S+ 0 0 113 0, 0.0 -12,-0.1 0, 0.0 -1,-0.1 0.730 92.5 72.4 -49.6 -24.4 48.0 -13.8 -16.1 78 84 A E T 3 0 0 134 -13,-0.1 -17,-0.1 -3,-0.1 -12,-0.1 0.441 360.0 360.0 -75.8 2.3 48.2 -15.4 -19.5 79 85 A f < 0 0 44 -3,-2.4 -15,-0.1 -19,-0.1 -12,-0.1 -0.515 360.0 360.0-108.1 360.0 44.4 -15.6 -19.8 80 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 81 1 B h 0 0 9 0, 0.0 -33,-2.2 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 149.6 30.9 -35.7 -20.7 82 2 B Y B >> -d 48 0B 4 -35,-0.2 3,-3.4 1,-0.1 4,-1.7 -0.533 360.0-114.3 -71.0 128.7 34.0 -33.7 -19.8 83 3 B F T 34 S+ 0 0 122 -35,-1.9 3,-0.3 1,-0.3 -1,-0.1 0.776 115.0 40.8 -26.6 -60.9 37.0 -34.8 -21.9 84 4 B Q T 34 S+ 0 0 156 1,-0.2 -1,-0.3 -37,-0.0 -2,-0.1 0.410 116.6 53.7 -77.4 1.5 39.1 -36.3 -19.2 85 5 B N T <4 0 0 91 -3,-3.4 -2,-0.2 0, 0.0 -1,-0.2 0.655 360.0 360.0-105.2 -27.3 35.9 -37.8 -17.6 86 6 B h < 0 0 85 -4,-1.7 -44,-0.0 -3,-0.3 -40,-0.0 -0.480 360.0 360.0 -61.8 360.0 34.7 -39.7 -20.7