==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 19-JUL-01 1JMQ . COMPND 2 MOLECULE: 65 KDA YES-ASSOCIATED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.R.PIRES,F.TAHA-NEJAD,F.TOEPERT,T.AST,U.HOFFMULLER, . 56 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4554.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 18 32.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 14.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 8.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A F 0 0 188 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 91.6 -4.5 10.3 3.2 2 6 A E + 0 0 133 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.081 360.0 103.4-100.1 25.6 -0.7 10.5 3.8 3 7 A I + 0 0 10 2,-0.0 -1,-0.1 38,-0.0 37,-0.1 -0.657 49.8 171.6-108.5 77.9 0.1 8.4 0.7 4 8 A P - 0 0 59 0, 0.0 3,-0.4 0, 0.0 -2,-0.1 0.073 49.1 -97.8 -71.1-171.5 1.3 10.9 -1.9 5 9 A D S S+ 0 0 148 1,-0.2 -2,-0.0 0, 0.0 0, 0.0 0.198 85.1 118.7 -97.0 18.4 2.9 10.0 -5.2 6 10 A D S S+ 0 0 135 1,-0.2 -1,-0.2 2,-0.1 -3,-0.0 0.822 88.2 15.5 -53.8 -26.2 6.4 10.4 -3.9 7 11 A V - 0 0 63 -3,-0.4 -1,-0.2 1,-0.2 32,-0.1 -0.996 67.8-144.1-150.0 143.3 6.8 6.7 -4.7 8 12 A P - 0 0 98 0, 0.0 -1,-0.2 0, 0.0 31,-0.1 0.942 65.6 -46.1 -71.0 -91.2 4.9 4.2 -6.8 9 13 A L - 0 0 50 29,-0.1 3,-0.1 28,-0.0 5,-0.1 -0.998 49.7-121.4-149.2 145.4 5.0 0.7 -5.1 10 14 A P > - 0 0 45 0, 0.0 3,-1.1 0, 0.0 29,-0.1 -0.160 57.4 -59.6 -77.6 176.0 7.8 -1.4 -3.5 11 15 A A T 3 S+ 0 0 79 1,-0.3 18,-0.2 27,-0.1 17,-0.0 -0.279 124.4 2.9 -57.7 138.6 8.7 -5.0 -4.6 12 16 A G T 3 S+ 0 0 22 16,-0.1 17,-0.8 1,-0.1 16,-0.7 0.916 105.9 113.8 51.4 44.0 5.7 -7.4 -4.3 13 17 A W B < +A 27 0A 52 -3,-1.1 14,-0.3 14,-0.3 -1,-0.1 -0.500 33.6 152.6-145.2 74.4 3.5 -4.5 -3.2 14 18 A E - 0 0 107 12,-1.2 2,-0.3 11,-0.1 12,-0.2 -0.033 26.5-146.6 -85.8-163.9 0.8 -3.6 -5.7 15 19 A M + 0 0 51 10,-0.4 2,-0.3 18,-0.1 10,-0.3 -0.949 15.9 176.1-167.3 144.5 -2.6 -2.1 -4.9 16 20 A A B -C 24 0B 28 8,-2.4 8,-2.5 -2,-0.3 2,-0.3 -0.947 30.4-105.4-146.9 167.4 -6.2 -2.2 -6.1 17 21 A K - 0 0 147 -2,-0.3 6,-0.1 6,-0.2 4,-0.1 -0.698 28.7-144.8 -97.9 151.4 -9.6 -0.8 -5.3 18 22 A T - 0 0 31 -2,-0.3 -1,-0.1 34,-0.0 5,-0.1 0.024 60.6 -44.4 -93.9-154.4 -12.4 -2.8 -3.7 19 23 A S S S+ 0 0 128 2,-0.1 -2,-0.1 1,-0.1 -1,-0.0 0.790 141.0 5.7 -46.9 -26.3 -16.2 -2.6 -4.2 20 24 A S S S- 0 0 94 2,-0.0 -3,-0.1 0, 0.0 -1,-0.1 0.563 125.1 -58.6-122.3 -81.6 -15.7 1.2 -4.0 21 25 A G + 0 0 47 -4,-0.1 2,-2.7 -5,-0.1 -2,-0.1 0.134 66.0 151.5-161.1 26.6 -12.2 2.6 -3.7 22 26 A Q - 0 0 83 1,-0.1 2,-0.7 2,-0.0 -6,-0.2 -0.364 42.2-145.9 -66.3 78.3 -10.6 1.1 -0.6 23 27 A R + 0 0 109 -2,-2.7 2,-0.5 -6,-0.1 -6,-0.2 -0.228 25.6 179.4 -49.7 97.3 -7.1 1.4 -2.1 24 28 A Y B -C 16 0B 20 -8,-2.5 -8,-2.4 -2,-0.7 2,-0.7 -0.885 26.9-128.6-107.4 129.9 -5.5 -1.7 -0.5 25 29 A F E - B 0 34A 3 9,-2.1 9,-2.2 11,-0.7 -10,-0.4 -0.644 21.9-142.0 -80.6 116.2 -1.9 -2.5 -1.4 26 30 A K E - B 0 33A 23 -2,-0.7 -12,-1.2 7,-0.3 2,-0.6 -0.481 8.8-145.6 -75.2 143.6 -1.5 -6.1 -2.6 27 31 A N E > +AB 13 32A 6 5,-1.8 5,-1.7 -14,-0.3 4,-0.3 -0.924 26.3 167.9-115.3 115.6 1.6 -8.0 -1.4 28 32 A H T 5S+ 0 0 52 -16,-0.7 -1,-0.1 -2,-0.6 -16,-0.1 0.793 79.4 61.9 -94.6 -29.6 3.1 -10.5 -3.8 29 33 A I T 5S+ 0 0 103 -17,-0.8 -1,-0.1 1,-0.2 -17,-0.1 0.839 130.2 13.4 -63.2 -27.3 6.4 -10.9 -1.9 30 34 A D T 5S- 0 0 112 -18,-0.4 -1,-0.2 2,-0.1 -2,-0.2 0.396 105.8-122.9-125.8 -2.9 4.1 -12.2 0.9 31 35 A Q T 5 + 0 0 132 -4,-0.3 2,-0.2 1,-0.2 -3,-0.2 0.976 66.5 111.8 57.8 82.8 0.8 -12.8 -1.0 32 36 A T E < -B 27 0A 69 -5,-1.7 -5,-1.8 23,-0.1 2,-0.4 -0.831 60.2-126.5-179.5 139.4 -1.7 -10.6 1.0 33 37 A T E -B 26 0A 8 19,-0.4 2,-0.3 -7,-0.3 -7,-0.3 -0.795 31.4-176.9 -96.4 132.3 -3.8 -7.4 0.5 34 38 A T E -B 25 0A 35 -9,-2.2 -9,-2.1 -2,-0.4 -2,-0.0 -0.943 31.5-141.3-129.3 152.5 -3.4 -4.7 3.2 35 39 A W S S+ 0 0 79 -2,-0.3 -1,-0.1 -11,-0.3 -10,-0.1 0.923 85.4 73.9 -75.9 -43.7 -5.0 -1.3 3.8 36 40 A Q S S- 0 0 127 1,-0.1 -11,-0.7 -12,-0.1 -2,-0.2 0.034 92.0-104.1 -59.1 177.4 -1.8 0.4 4.9 37 41 A D >> - 0 0 17 4,-0.1 3,-0.9 -13,-0.1 4,-0.7 -0.904 9.1-146.2-112.5 138.6 0.9 1.3 2.4 38 42 A P T 34 S+ 0 0 20 0, 0.0 -1,-0.1 0, 0.0 -27,-0.1 0.361 101.8 41.2 -80.8 6.7 4.1 -0.7 1.9 39 43 A R T 34 S+ 0 0 26 -31,-0.1 -30,-0.0 -32,-0.1 -26,-0.0 0.155 133.0 11.0-138.1 20.0 6.0 2.6 1.0 40 44 A K T <4 S+ 0 0 79 -3,-0.9 2,-0.1 -37,-0.1 4,-0.1 0.308 124.1 47.8-163.8 -39.4 4.6 5.1 3.5 41 45 A A S < S+ 0 0 25 -4,-0.7 -4,-0.1 2,-0.1 2,-0.1 -0.335 84.4 114.4-111.9 52.8 2.6 3.4 6.3 42 46 A M S S- 0 0 116 2,-0.2 2,-3.3 -2,-0.1 -3,-0.0 -0.184 88.3 -45.6-103.5-160.0 4.9 0.6 7.3 43 47 A L S S+ 0 0 172 -2,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.312 109.8 91.3 -68.7 69.6 6.9 -0.1 10.5 44 48 A S + 0 0 84 -2,-3.3 -2,-0.2 -4,-0.1 -1,-0.0 -0.741 33.0 155.9-166.1 112.7 8.0 3.5 10.8 45 49 A Q 0 0 194 -2,-0.2 -2,-0.0 -4,-0.1 -4,-0.0 -0.392 360.0 360.0-138.1 61.2 6.4 6.5 12.6 46 50 A M 0 0 251 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.132 360.0 360.0-105.4 360.0 9.1 9.0 13.4 47 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 48 51 P G 0 0 131 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 130.5 -13.3 -1.3 9.9 49 52 P T - 0 0 80 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.936 360.0 -94.9-174.8 151.8 -13.1 -4.5 7.7 50 53 P P - 0 0 101 0, 0.0 -16,-0.1 0, 0.0 0, 0.0 -0.327 50.3 -96.7 -72.1 157.1 -10.7 -7.2 6.6 51 54 P P - 0 0 62 0, 0.0 -17,-0.1 0, 0.0 -16,-0.0 -0.077 49.7 -82.5 -66.6 172.3 -8.6 -6.9 3.4 52 55 P P - 0 0 30 0, 0.0 -19,-0.4 0, 0.0 3,-0.1 -0.089 45.0 -97.1 -69.9 174.6 -9.7 -8.4 0.1 53 56 P P - 0 0 125 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.377 58.8-134.0 -76.3 5.9 -9.1 -12.1 -0.8 54 57 P Y - 0 0 29 -22,-0.0 2,-0.3 1,-0.0 -28,-0.0 0.266 26.5-163.6 58.1 163.3 -6.0 -11.0 -2.8 55 58 P T - 0 0 77 -3,-0.1 -23,-0.1 -23,-0.0 -24,-0.0 -0.917 21.7-152.7-162.3-172.4 -5.3 -12.4 -6.3 56 59 P V 0 0 106 1,-0.5 -2,-0.0 -2,-0.3 -28,-0.0 -0.149 360.0 360.0-175.0 67.3 -2.7 -12.8 -9.0 57 60 P G 0 0 153 0, 0.0 -1,-0.5 0, 0.0 0, 0.0 -0.394 360.0 360.0 56.1 360.0 -3.9 -13.0 -12.6