==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 21-SEP-06 2JM3 . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; . AUTHOR C.K.LIEW,M.CROSSLEY,J.P.MACKAY,H.R.NICHOLAS . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6330.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 46.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 125 0, 0.0 4,-0.1 0, 0.0 26,-0.0 0.000 360.0 360.0 360.0 149.9 7.8 -9.4 10.9 2 2 A S + 0 0 132 2,-0.1 0, 0.0 0, 0.0 0, 0.0 0.750 360.0 72.5 -96.5 -30.4 10.7 -11.9 10.9 3 3 A M S S- 0 0 147 1,-0.1 2,-0.6 3,-0.0 0, 0.0 -0.694 98.9 -99.0 -91.8 136.3 11.1 -12.2 7.1 4 4 A P - 0 0 109 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.370 49.8-136.4 -50.9 101.9 12.7 -9.4 5.0 5 5 A T - 0 0 55 -2,-0.6 2,-0.5 -4,-0.1 50,-0.0 -0.513 20.3-166.0 -78.3 123.8 9.4 -7.9 3.7 6 6 A T - 0 0 77 -2,-0.4 51,-0.4 49,-0.1 2,-0.0 -0.952 18.5-133.0-107.8 121.5 9.2 -7.0 0.1 7 7 A C - 0 0 11 -2,-0.5 51,-0.2 49,-0.1 5,-0.2 -0.330 16.3-122.6 -71.7 157.5 6.2 -4.8 -0.9 8 8 A G + 0 0 6 49,-3.1 50,-0.1 3,-0.1 -1,-0.1 0.058 64.2 130.1 -96.7 24.6 4.2 -5.8 -3.9 9 9 A F > - 0 0 21 48,-0.2 3,-0.6 1,-0.1 36,-0.1 -0.558 65.3-127.7 -76.4 141.5 4.6 -2.6 -5.9 10 10 A P T 3 S+ 0 0 90 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.810 105.3 10.2 -57.2 -29.7 5.8 -3.0 -9.5 11 11 A N T 3 S- 0 0 111 0, 0.0 2,-1.3 0, 0.0 -3,-0.1 -0.704 73.0-160.6-152.7 92.8 8.5 -0.5 -8.6 12 12 A C < + 0 0 18 -3,-0.6 4,-0.5 -2,-0.2 5,-0.0 -0.668 15.6 173.4 -75.4 98.3 9.0 0.4 -5.0 13 13 A K + 0 0 76 -2,-1.3 -1,-0.2 63,-0.3 64,-0.0 0.323 69.7 65.7 -86.7 7.3 10.9 3.6 -5.4 14 14 A F S > S+ 0 0 19 2,-0.2 4,-0.7 3,-0.1 -1,-0.2 0.860 99.7 42.2 -99.8 -44.7 10.7 4.2 -1.7 15 15 A R T 4 S+ 0 0 63 1,-0.2 5,-0.3 2,-0.2 -2,-0.1 0.683 120.2 48.3 -75.0 -15.9 12.8 1.3 -0.2 16 16 A S T 4 S+ 0 0 69 -4,-0.5 -1,-0.2 1,-0.1 -2,-0.2 0.625 99.3 66.8 -90.6 -19.6 15.2 2.1 -3.0 17 17 A R T 4 S+ 0 0 116 -5,-0.0 2,-0.2 5,-0.0 -2,-0.2 0.750 97.3 68.8 -68.7 -25.0 14.9 5.8 -2.1 18 18 A Y S < S- 0 0 66 -4,-0.7 2,-0.5 2,-0.0 4,-0.1 -0.574 80.5-137.3 -93.7 160.0 16.7 4.8 1.1 19 19 A R S S- 0 0 213 2,-0.3 -3,-0.1 -2,-0.2 -2,-0.0 -0.732 77.8 -32.1-124.8 81.0 20.3 3.7 1.3 20 20 A G S S+ 0 0 77 -2,-0.5 2,-0.4 -5,-0.3 -4,-0.0 0.145 128.1 72.3 100.3 -19.4 20.7 0.7 3.6 21 21 A L - 0 0 137 -6,-0.1 -2,-0.3 1,-0.1 0, 0.0 -0.888 51.4-176.9-134.2 102.3 18.0 1.7 6.0 22 22 A E > - 0 0 61 -2,-0.4 3,-1.4 -4,-0.1 -1,-0.1 0.168 53.1-112.9 -83.2 17.5 14.4 1.2 4.8 23 23 A D T 3 - 0 0 95 1,-0.3 -1,-0.1 -8,-0.1 3,-0.1 0.306 41.5-102.5 70.6 -7.9 13.2 2.8 8.1 24 24 A N T 3 - 0 0 132 1,-0.1 -1,-0.3 2,-0.0 3,-0.1 0.907 59.6-161.8 53.3 42.7 11.8 -0.7 8.8 25 25 A R < - 0 0 78 -3,-1.4 2,-0.6 1,-0.2 -1,-0.1 -0.087 28.3 -85.2 -57.8 151.6 8.5 1.0 7.9 26 26 A H - 0 0 135 40,-0.1 2,-0.8 1,-0.1 34,-0.4 -0.452 43.8-141.2 -60.7 108.3 5.2 -0.5 8.9 27 27 A F - 0 0 50 -2,-0.6 2,-0.2 32,-0.2 32,-0.2 -0.658 19.5-145.6 -79.5 109.4 4.5 -3.1 6.2 28 28 A Y B -A 58 0A 33 30,-3.2 30,-2.4 -2,-0.8 2,-0.3 -0.533 2.0-141.8 -80.0 137.1 0.8 -2.8 5.6 29 29 A R - 0 0 105 -2,-0.2 28,-0.1 28,-0.2 27,-0.0 -0.760 40.5 -90.9 -89.0 145.0 -1.3 -5.8 4.6 30 30 A I - 0 0 1 26,-0.5 8,-0.1 -2,-0.3 -1,-0.1 -0.414 48.4-120.6 -59.2 118.2 -4.1 -5.1 2.1 31 31 A P - 0 0 9 0, 0.0 10,-0.1 0, 0.0 -1,-0.1 -0.165 18.3-161.9 -55.1 152.1 -7.3 -4.2 4.0 32 32 A K + 0 0 140 1,-0.2 3,-0.1 6,-0.1 -2,-0.1 0.283 59.9 100.7-117.8 6.1 -10.4 -6.3 3.6 33 33 A R S S+ 0 0 171 1,-0.3 -1,-0.2 2,-0.1 2,-0.1 -0.964 82.8 22.0-148.4 121.2 -12.7 -3.7 5.0 34 34 A P S > S- 0 0 29 0, 0.0 4,-1.8 0, 0.0 3,-0.4 0.653 83.1-144.9 -73.8 167.3 -14.3 -2.0 3.3 35 35 A L H > S+ 0 0 105 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.874 100.1 55.9 -64.3 -38.3 -14.3 -4.4 0.3 36 36 A I H > S+ 0 0 97 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.804 105.7 52.9 -65.6 -28.1 -14.2 -1.4 -2.1 37 37 A L H > S+ 0 0 1 -3,-0.4 4,-2.1 2,-0.2 -1,-0.2 0.913 108.3 49.2 -71.0 -43.2 -11.1 -0.2 -0.3 38 38 A R H X S+ 0 0 32 -4,-1.8 4,-0.8 1,-0.2 -2,-0.2 0.894 111.6 50.2 -59.8 -41.5 -9.4 -3.6 -0.8 39 39 A Q H >X S+ 0 0 95 -4,-2.4 3,-0.7 1,-0.2 4,-0.5 0.905 110.4 49.1 -62.7 -43.0 -10.4 -3.4 -4.5 40 40 A R H >X S+ 0 0 120 -4,-2.0 3,-1.1 1,-0.2 4,-0.9 0.832 100.9 65.1 -66.7 -33.0 -8.9 0.1 -4.8 41 41 A W H 3X S+ 0 0 0 -4,-2.1 4,-0.6 1,-0.3 -1,-0.2 0.789 96.9 56.5 -61.2 -28.1 -5.7 -1.1 -3.1 42 42 A L H S+ 0 0 11 -4,-0.8 5,-2.1 -3,-0.7 4,-0.7 0.739 95.9 65.9 -76.6 -22.1 -5.1 -3.3 -6.1 43 43 A T H X<5S+ 0 0 79 -3,-1.1 3,-0.6 -4,-0.5 -1,-0.2 0.891 95.6 56.0 -66.0 -39.3 -5.3 -0.3 -8.5 44 44 A A H 3<5S+ 0 0 17 -4,-0.9 -1,-0.2 1,-0.3 -2,-0.2 0.822 115.5 36.6 -64.3 -33.1 -2.1 1.2 -7.0 45 45 A I H 3<5S- 0 0 4 -4,-0.6 -1,-0.3 -3,-0.2 -2,-0.2 0.457 105.2-126.6 -99.4 -4.0 -0.1 -1.9 -7.7 46 46 A G T <<5 + 0 0 69 -4,-0.7 2,-0.2 -3,-0.6 -3,-0.2 0.840 67.4 130.7 60.0 34.1 -1.9 -2.7 -11.0 47 47 A R < - 0 0 96 -5,-2.1 -1,-0.2 -6,-0.1 2,-0.2 -0.686 53.7-124.0-115.7 167.5 -2.6 -6.2 -9.7 48 48 A T > - 0 0 74 -2,-0.2 3,-0.9 -3,-0.1 -1,-0.0 -0.573 30.9-104.5-105.8 175.5 -5.6 -8.4 -9.4 49 49 A E G > S+ 0 0 92 1,-0.3 3,-0.9 -2,-0.2 -1,-0.0 0.791 121.2 50.0 -75.6 -29.3 -7.1 -10.1 -6.4 50 50 A E G 3 S+ 0 0 146 1,-0.2 -1,-0.3 3,-0.1 4,-0.0 0.520 113.1 50.9 -82.2 -5.1 -5.8 -13.6 -7.2 51 51 A T G < S+ 0 0 61 -3,-0.9 2,-0.3 3,-0.0 -1,-0.2 0.004 111.9 49.4-118.7 23.0 -2.4 -11.9 -7.6 52 52 A V S < S+ 0 0 4 -3,-0.9 2,-1.7 -5,-0.1 5,-0.0 -0.886 81.4 44.7-151.5 172.8 -2.4 -10.0 -4.3 53 53 A V S S+ 0 0 35 -2,-0.3 -23,-0.1 1,-0.2 -3,-0.1 -0.235 94.4 78.7 83.1 -46.9 -3.0 -10.3 -0.5 54 54 A S S S- 0 0 94 -2,-1.7 -1,-0.2 1,-0.1 -3,-0.0 0.987 123.1 -12.1 -57.7 -73.4 -1.0 -13.5 -0.1 55 55 A Q S S+ 0 0 111 2,-0.0 -49,-0.1 -47,-0.0 -1,-0.1 0.786 109.3 108.2 -97.4 -35.4 2.6 -12.3 -0.1 56 56 A L + 0 0 16 -49,-0.1 -26,-0.5 -48,-0.1 2,-0.3 -0.147 42.4 169.3 -53.8 129.0 2.0 -8.7 -1.4 57 57 A R - 0 0 74 -51,-0.4 -49,-3.1 -28,-0.1 2,-0.4 -0.846 24.4-132.7-131.8 168.9 2.5 -6.0 1.2 58 58 A I B -A 28 0A 0 -30,-2.4 -30,-3.2 -2,-0.3 2,-0.0 -0.990 16.0-125.4-133.0 127.0 2.7 -2.3 1.1 59 59 A C > - 0 0 2 -2,-0.4 3,-1.7 -32,-0.2 -32,-0.2 -0.356 19.6-129.0 -59.6 144.5 5.2 0.1 2.6 60 60 A S G > S+ 0 0 2 -34,-0.4 3,-0.9 1,-0.3 6,-0.2 0.602 105.6 77.0 -70.0 -9.5 3.7 2.8 4.8 61 61 A A G 3 S+ 0 0 4 1,-0.3 -1,-0.3 5,-0.1 4,-0.1 0.574 77.4 72.4 -76.2 -9.7 5.9 5.1 2.7 62 62 A H G < S+ 0 0 0 -3,-1.7 13,-2.6 15,-0.1 2,-0.4 0.162 88.8 79.0 -90.6 17.8 3.3 4.8 -0.1 63 63 A F S X S- 0 0 8 -3,-0.9 2,-1.6 11,-0.2 3,-1.2 -0.988 84.3-122.8-130.0 135.2 0.9 7.0 1.9 64 64 A E T 3 S+ 0 0 140 -2,-0.4 -3,-0.1 1,-0.3 -2,-0.1 -0.610 114.6 14.4 -71.6 90.8 0.8 10.7 2.3 65 65 A G T 3 S- 0 0 62 -2,-1.6 -1,-0.3 -5,-0.1 3,-0.1 0.126 109.6-109.1 123.0 -16.7 1.0 10.6 6.0 66 66 A G S < S+ 0 0 17 -3,-1.2 2,-0.5 1,-0.2 -40,-0.1 0.722 79.5 128.1 68.1 23.6 2.1 7.0 6.3 67 67 A E - 0 0 97 -3,-0.1 2,-0.6 -6,-0.1 -1,-0.2 -0.947 42.3-167.5-123.7 120.8 -1.3 6.0 7.7 68 68 A K + 0 0 63 -2,-0.5 5,-0.1 1,-0.1 -8,-0.0 -0.934 27.3 144.7-101.0 119.6 -3.6 3.3 6.5 69 69 A K S S- 0 0 123 -2,-0.6 -1,-0.1 -38,-0.0 0, 0.0 0.505 71.8 -62.1-113.2 -95.0 -7.1 3.5 8.0 70 70 A E S S+ 0 0 53 16,-0.1 -33,-0.1 -39,-0.0 -2,-0.1 0.158 128.1 40.9-148.1 15.6 -10.1 2.5 5.9 71 71 A G S S+ 0 0 11 16,-0.1 15,-2.7 17,-0.1 2,-0.5 0.086 86.0 105.6-152.7 26.7 -10.0 5.0 3.1 72 72 A D B -B 85 0B 31 13,-0.2 13,-0.2 15,-0.0 -31,-0.0 -0.954 44.6-170.0-122.9 113.0 -6.4 5.2 2.2 73 73 A I - 0 0 0 11,-2.6 11,-0.3 -2,-0.5 -32,-0.1 -0.796 30.2-108.1 -99.5 143.2 -5.0 3.6 -0.9 74 74 A P - 0 0 0 0, 0.0 -11,-0.2 0, 0.0 10,-0.2 -0.298 32.6-157.4 -67.1 153.1 -1.2 3.3 -1.5 75 75 A V - 0 0 0 -13,-2.6 8,-0.1 8,-0.1 -31,-0.0 -0.935 25.6-123.4-130.2 157.3 0.4 5.5 -4.2 76 76 A P S S- 0 0 38 0, 0.0 -63,-0.3 0, 0.0 -1,-0.1 0.871 103.1 -1.8 -65.4 -36.7 3.7 5.2 -6.2 77 77 A D >> - 0 0 6 -15,-0.1 4,-3.3 1,-0.1 3,-2.1 -0.739 57.4-166.4-159.1 100.7 4.9 8.5 -5.0 78 78 A P T 34 S+ 0 0 26 0, 0.0 5,-0.3 0, 0.0 -16,-0.1 0.722 95.5 58.7 -61.1 -20.4 2.8 10.8 -2.7 79 79 A T T 34 S+ 0 0 113 3,-0.1 3,-0.0 -3,-0.1 -15,-0.0 0.520 125.7 14.2 -85.8 -7.0 5.2 13.6 -3.5 80 80 A V T <4 S+ 0 0 115 -3,-2.1 -1,-0.1 0, 0.0 0, 0.0 0.613 118.1 55.6-132.1 -50.7 4.5 13.3 -7.3 81 81 A D S < S- 0 0 60 -4,-3.3 2,-0.9 1,-0.1 -6,-0.1 -0.012 93.8 -82.6 -83.9-171.6 1.4 11.2 -8.0 82 82 A K - 0 0 151 -3,-0.0 -1,-0.1 1,-0.0 2,-0.1 -0.831 40.7-127.9-103.2 99.1 -2.2 11.6 -6.8 83 83 A Q - 0 0 47 -2,-0.9 2,-0.7 -5,-0.3 -8,-0.1 -0.237 26.0-136.3 -41.5 107.8 -2.7 10.0 -3.3 84 84 A I + 0 0 43 -11,-0.3 -11,-2.6 -10,-0.2 2,-0.3 -0.662 38.2 159.6 -79.6 111.8 -5.7 7.8 -3.9 85 85 A K B -B 72 0B 158 -2,-0.7 2,-0.3 -13,-0.2 -13,-0.2 -0.942 22.4-151.4-131.0 156.5 -8.1 8.1 -1.0 86 86 A I - 0 0 57 -15,-2.7 2,-1.0 -2,-0.3 -16,-0.1 -0.908 20.0-122.9-128.2 153.8 -11.7 7.3 -0.6 87 87 A E - 0 0 176 -2,-0.3 -16,-0.1 -15,-0.0 -15,-0.0 -0.826 32.9-148.8 -96.3 99.3 -14.6 8.6 1.4 88 88 A L - 0 0 71 -2,-1.0 -17,-0.1 1,-0.1 -18,-0.0 -0.482 25.4-104.7 -70.2 132.1 -15.9 5.6 3.3 89 89 A P - 0 0 90 0, 0.0 2,-1.0 0, 0.0 -1,-0.1 -0.426 39.8-110.6 -58.3 122.5 -19.6 5.6 4.0 90 90 A P 0 0 123 0, 0.0 -3,-0.0 0, 0.0 -2,-0.0 -0.440 360.0 360.0 -64.2 96.5 -20.1 6.4 7.7 91 91 A K 0 0 233 -2,-1.0 -3,-0.0 0, 0.0 0, 0.0 0.043 360.0 360.0 77.3 360.0 -21.4 3.1 9.1