==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 25-OCT-06 2JM9 . COMPND 2 MOLECULE: SPECTRIN ALPHA CHAIN, BRAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; . AUTHOR N.A.J.VAN NULAND,S.CASARES,E.AB,H.ESHUIS,O.LOPEZ-MAYORGA, . 62 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4052.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 66.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 35.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 161 0, 0.0 47,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 29.2 10.9 -9.2 0.1 2 2 A D - 0 0 84 1,-0.1 2,-0.4 45,-0.0 45,-0.0 -0.035 360.0 -72.4 -95.7-161.9 12.2 -6.1 -1.6 3 3 A E - 0 0 169 1,-0.1 2,-2.2 -2,-0.0 -1,-0.1 -0.838 41.1-125.5 -99.8 134.6 13.8 -2.9 -0.4 4 4 A T S S+ 0 0 87 -2,-0.4 4,-0.1 1,-0.1 3,-0.1 -0.302 83.7 84.1 -83.2 55.7 11.4 -0.5 1.3 5 5 A G + 0 0 33 -2,-2.2 28,-0.5 2,-0.1 -1,-0.1 0.265 32.4 109.4-111.2-115.2 12.2 2.5 -0.9 6 6 A K S S- 0 0 87 26,-0.1 27,-0.2 2,-0.1 -1,-0.1 0.738 113.1 -46.4 46.8 33.5 10.5 3.1 -4.3 7 7 A E S S- 0 0 113 25,-0.1 26,-2.5 -3,-0.1 2,-0.2 0.820 75.7-130.2 71.2 108.2 8.5 6.0 -2.7 8 8 A L E -A 32 0A 47 24,-0.2 53,-3.0 -4,-0.1 54,-1.0 -0.530 20.2-161.8 -91.5 155.9 7.0 5.2 0.6 9 9 A V E -AB 31 60A 0 22,-2.7 22,-2.5 51,-0.3 2,-0.4 -0.944 14.2-127.1-135.6 155.8 3.4 5.7 1.8 10 10 A L E -AB 30 59A 30 49,-2.8 49,-1.6 -2,-0.3 2,-0.8 -0.838 20.5-127.0-103.7 138.2 1.6 5.8 5.1 11 11 A A E - B 0 58A 0 18,-2.1 17,-1.7 -2,-0.4 18,-0.3 -0.770 24.1-176.4 -84.2 109.8 -1.5 3.7 5.8 12 12 A L + 0 0 50 45,-2.9 2,-0.3 -2,-0.8 -1,-0.2 0.843 66.1 19.5 -73.5 -35.4 -4.1 6.2 7.0 13 13 A Y S S- 0 0 119 44,-0.8 2,-0.6 13,-0.1 15,-0.1 -0.792 87.5 -91.9-132.2 170.2 -6.7 3.6 7.8 14 14 A D - 0 0 107 -2,-0.3 2,-0.4 12,-0.2 12,-0.2 -0.773 47.1-175.2 -85.9 121.9 -7.1 -0.1 8.5 15 15 A Y B -F 25 0B 20 10,-3.0 10,-1.7 -2,-0.6 2,-0.5 -0.967 15.4-153.0-126.1 137.5 -7.8 -2.0 5.3 16 16 A Q - 0 0 121 -2,-0.4 8,-0.1 8,-0.2 7,-0.1 -0.919 25.7-116.7-111.6 129.0 -8.6 -5.7 4.7 17 17 A E - 0 0 83 -2,-0.5 7,-0.1 1,-0.1 36,-0.1 -0.232 21.8-168.6 -58.1 147.3 -7.7 -7.4 1.4 18 18 A K S S+ 0 0 131 1,-0.4 -1,-0.1 5,-0.1 6,-0.0 0.777 71.1 15.3-106.2 -45.9 -10.7 -8.7 -0.6 19 19 A S S > S- 0 0 61 4,-0.0 3,-2.6 0, 0.0 -1,-0.4 -0.795 90.8 -95.0-123.2 167.7 -9.0 -10.8 -3.2 20 20 A P T 3 S+ 0 0 133 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.543 121.1 69.1 -61.2 -5.3 -5.4 -12.3 -3.4 21 21 A A T 3 S+ 0 0 51 30,-0.1 31,-2.8 2,-0.0 2,-0.2 0.616 95.9 63.0 -86.4 -15.0 -4.6 -9.2 -5.5 22 22 A E B < S-c 52 0A 19 -3,-2.6 2,-0.3 29,-0.3 31,-0.2 -0.694 71.3-146.4-106.6 161.2 -5.0 -6.9 -2.4 23 23 A V - 0 0 8 29,-1.5 2,-0.4 -2,-0.2 28,-0.1 -0.951 20.3-113.1-126.9 150.7 -3.0 -6.8 0.8 24 24 A T + 0 0 35 -2,-0.3 2,-0.3 -8,-0.1 -8,-0.2 -0.668 36.0 179.7 -83.7 130.3 -4.0 -6.0 4.3 25 25 A M B -F 15 0B 0 -10,-1.7 -10,-3.0 -2,-0.4 2,-0.3 -0.927 12.9-151.5-128.0 153.4 -2.7 -2.8 5.9 26 26 A K > - 0 0 90 -2,-0.3 3,-2.0 -12,-0.2 -15,-0.3 -0.920 38.2 -85.2-124.0 151.7 -3.1 -1.1 9.3 27 27 A K T 3 S+ 0 0 133 -2,-0.3 -15,-0.2 1,-0.3 3,-0.1 -0.338 119.0 31.8 -55.0 120.7 -3.0 2.5 10.3 28 28 A G T 3 S+ 0 0 43 -17,-1.7 2,-0.3 1,-0.4 -1,-0.3 0.408 87.8 131.3 107.0 -0.0 0.7 3.3 11.0 29 29 A D < - 0 0 36 -3,-2.0 -18,-2.1 -18,-0.3 2,-0.7 -0.673 52.3-138.7 -86.1 140.2 2.1 0.9 8.4 30 30 A I E -A 10 0A 84 -2,-0.3 17,-0.3 -20,-0.2 2,-0.3 -0.890 24.0-166.0-101.3 111.3 4.7 2.1 6.0 31 31 A L E -A 9 0A 0 -22,-2.5 -22,-2.7 -2,-0.7 2,-0.5 -0.660 16.0-131.3 -97.8 150.9 4.0 0.7 2.5 32 32 A T E -AD 8 45A 3 13,-1.6 13,-1.4 -2,-0.3 2,-0.4 -0.908 23.5-126.8-103.1 125.2 6.4 0.7 -0.5 33 33 A L E + D 0 44A 8 -26,-2.5 11,-0.2 -2,-0.5 3,-0.1 -0.553 35.9 164.1 -75.4 123.6 4.9 2.0 -3.8 34 34 A L E S+ 0 0 49 9,-3.5 2,-0.3 -2,-0.4 10,-0.2 0.726 76.6 2.1-103.3 -37.4 5.3 -0.4 -6.6 35 35 A N E + D 0 43A 76 8,-1.7 8,-2.8 1,-0.0 -1,-0.3 -0.895 56.7 162.0-156.0 121.1 2.8 1.2 -9.0 36 36 A S + 0 0 49 -2,-0.3 6,-0.1 6,-0.2 -1,-0.0 -0.009 44.3 111.4-130.7 28.7 0.8 4.3 -8.4 37 37 A T + 0 0 130 2,-0.0 2,-0.3 4,-0.0 5,-0.1 0.578 65.1 83.5 -80.2 -7.9 -0.3 5.2 -11.9 38 38 A N S S- 0 0 68 3,-0.5 -3,-0.0 1,-0.1 5,-0.0 -0.706 71.9-147.7 -95.0 146.5 -3.8 4.4 -10.9 39 39 A K S S+ 0 0 181 -2,-0.3 -1,-0.1 1,-0.1 3,-0.1 0.748 95.7 30.9 -85.2 -24.8 -6.0 6.9 -9.1 40 40 A D S S+ 0 0 105 1,-0.2 15,-2.6 15,-0.1 16,-0.5 0.747 120.4 44.5-105.5 -31.1 -8.0 4.5 -7.0 41 41 A W E - E 0 54A 89 13,-0.3 2,-0.5 14,-0.1 -3,-0.5 -0.968 58.8-168.7-125.9 127.3 -5.6 1.6 -6.4 42 42 A W E - E 0 53A 42 11,-3.2 11,-1.8 -2,-0.5 2,-0.5 -0.965 20.2-136.3-115.7 123.6 -1.9 1.8 -5.5 43 43 A K E +DE 35 52A 50 -8,-2.8 -9,-3.5 -2,-0.5 -8,-1.7 -0.681 39.0 160.5 -80.2 123.2 0.2 -1.4 -5.7 44 44 A V E -DE 33 51A 0 7,-3.2 7,-3.0 -2,-0.5 2,-0.4 -0.864 35.6-127.2-138.5 167.6 2.4 -1.7 -2.6 45 45 A E E -DE 32 50A 6 -13,-1.4 -13,-1.6 -2,-0.3 2,-0.6 -0.989 11.3-161.1-120.8 128.3 4.4 -4.2 -0.6 46 46 A V E > S- E 0 49A 10 3,-2.5 2,-4.0 -2,-0.4 3,-3.0 -0.955 73.0 -50.7-106.6 112.2 4.1 -4.7 3.1 47 47 A N T 3 S- 0 0 124 -2,-0.6 3,-0.1 -17,-0.3 -43,-0.0 -0.189 130.6 -21.7 58.5 -53.2 7.1 -6.4 4.6 48 48 A D T 3 S+ 0 0 54 -2,-4.0 2,-0.7 -47,-0.1 -1,-0.3 0.341 113.5 103.8-152.1 -17.3 6.9 -9.1 1.9 49 49 A R E < - E 0 46A 136 -3,-3.0 -3,-2.5 -25,-0.1 2,-0.5 -0.658 50.9-162.5 -88.2 110.8 3.3 -9.0 0.7 50 50 A Q E + E 0 45A 78 -2,-0.7 2,-0.3 -5,-0.3 -5,-0.2 -0.807 33.7 122.2 -92.0 125.6 2.8 -7.3 -2.6 51 51 A G E - E 0 44A 3 -7,-3.0 -7,-3.2 -2,-0.5 2,-0.3 -0.960 57.3 -81.4-164.9 178.3 -0.7 -6.3 -3.4 52 52 A F E +cE 22 43A 71 -31,-2.8 -29,-1.5 -2,-0.3 -9,-0.2 -0.710 38.0 178.9 -94.5 145.6 -3.1 -3.5 -4.3 53 53 A V E - E 0 42A 0 -11,-1.8 -11,-3.2 -2,-0.3 2,-0.2 -0.961 40.7 -83.8-138.0 157.9 -4.6 -1.1 -1.8 54 54 A P E > - E 0 41A 15 0, 0.0 3,-1.9 0, 0.0 4,-0.4 -0.458 27.9-145.6 -60.8 124.8 -7.0 1.9 -2.0 55 55 A A G > S+ 0 0 14 -15,-2.6 3,-0.6 1,-0.3 -14,-0.1 0.733 101.4 63.8 -62.5 -22.3 -5.0 5.1 -2.9 56 56 A A G 3 S+ 0 0 74 -16,-0.5 -1,-0.3 1,-0.2 -15,-0.1 0.626 101.3 50.7 -75.6 -13.1 -7.5 6.9 -0.7 57 57 A Y G < S+ 0 0 84 -3,-1.9 -45,-2.9 -45,-0.1 -44,-0.8 0.472 108.0 60.7-101.3 -5.6 -6.2 4.9 2.3 58 58 A V E < -B 11 0A 10 -3,-0.6 2,-0.4 -4,-0.4 -47,-0.2 -0.885 62.1-162.4-128.5 152.0 -2.6 5.7 1.6 59 59 A K E -B 10 0A 109 -49,-1.6 -49,-2.8 -2,-0.3 -3,-0.0 -0.999 32.1 -97.6-139.1 137.9 -0.5 8.9 1.5 60 60 A K E -B 9 0A 70 -2,-0.4 -51,-0.3 -51,-0.2 -53,-0.0 -0.268 28.8-178.8 -47.0 122.8 2.9 9.9 0.1 61 61 A L 0 0 80 -53,-3.0 -52,-0.2 1,-0.1 -1,-0.2 0.546 360.0 360.0 -94.5 -15.1 5.5 9.8 2.8 62 62 A D 0 0 129 -54,-1.0 -53,-0.1 -3,-0.0 -1,-0.1 0.785 360.0 360.0 -78.6 360.0 8.0 11.0 0.2