==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 25-OCT-06 2JMA . COMPND 2 MOLECULE: SPECTRIN ALPHA CHAIN, BRAIN; . SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; . AUTHOR N.A.J.VAN NULAND,S.CASARES,E.AB,H.ESHUIS,O.LOPEZ-MAYORGA, . 72 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4549.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 56.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 30.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 208 0, 0.0 2,-0.3 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 52.7 -18.5 -6.9 -4.3 2 2 A D > + 0 0 131 1,-0.1 3,-2.1 3,-0.1 0, 0.0 -0.497 360.0 154.2-117.4 61.2 -17.3 -3.9 -2.2 3 3 A E T 3 S+ 0 0 80 1,-0.3 -1,-0.1 -2,-0.3 42,-0.1 0.669 74.9 60.8 -61.2 -14.3 -13.7 -4.9 -1.4 4 4 A T T 3 S+ 0 0 76 1,-0.2 2,-0.8 -3,-0.2 -1,-0.3 0.240 76.6 99.3 -97.8 15.7 -13.0 -1.1 -1.2 5 5 A G < + 0 0 61 -3,-2.1 2,-0.2 27,-0.1 -1,-0.2 -0.390 68.9 77.4 -98.5 55.0 -15.5 -0.8 1.6 6 6 A K S S- 0 0 92 -2,-0.8 2,-0.3 -3,-0.1 28,-0.1 -0.659 99.4 -32.0-140.7-167.1 -12.9 -0.9 4.4 7 7 A E S S- 0 0 91 26,-0.4 26,-3.9 -2,-0.2 2,-0.3 -0.420 71.0-147.9 -58.1 117.7 -10.4 1.4 6.1 8 8 A L E -A 32 0A 52 -2,-0.3 53,-2.4 24,-0.2 54,-0.6 -0.647 17.6-172.7 -98.2 152.6 -9.3 3.7 3.2 9 9 A V E -AB 31 60A 0 22,-3.1 22,-2.4 -2,-0.3 2,-0.4 -0.915 20.7-123.2-134.8 160.5 -6.0 5.3 2.6 10 10 A L E -AB 30 59A 44 49,-2.5 49,-1.8 -2,-0.3 2,-0.9 -0.889 20.8-127.6-109.6 136.0 -4.7 7.9 0.1 11 11 A A E - B 0 58A 0 18,-2.4 17,-2.1 -2,-0.4 18,-0.3 -0.743 22.9-175.8 -85.0 108.5 -1.7 7.2 -2.2 12 12 A L + 0 0 51 45,-2.2 2,-0.3 -2,-0.9 -1,-0.2 0.834 66.6 13.0 -71.9 -36.1 0.7 10.1 -1.7 13 13 A Y S S- 0 0 65 44,-0.9 2,-0.3 13,-0.1 15,-0.1 -0.871 86.4 -88.4-138.0 170.4 3.2 8.9 -4.4 14 14 A D - 0 0 81 -2,-0.3 2,-0.3 12,-0.2 12,-0.2 -0.636 44.9-176.7 -81.9 135.8 3.5 6.5 -7.3 15 15 A Y B -F 25 0B 12 10,-2.7 10,-1.4 -2,-0.3 2,-0.4 -0.988 17.3-149.9-137.2 145.2 4.8 3.1 -6.4 16 16 A Q - 0 0 112 -2,-0.3 8,-0.1 8,-0.2 7,-0.1 -0.961 29.1-113.5-117.2 129.4 5.7 -0.1 -8.3 17 17 A E - 0 0 90 -2,-0.4 7,-0.1 1,-0.2 36,-0.1 -0.359 29.8-177.9 -60.6 132.6 5.3 -3.6 -6.9 18 18 A K + 0 0 107 1,-0.1 -1,-0.2 5,-0.1 6,-0.0 0.785 65.2 32.5-102.5 -36.1 8.7 -5.2 -6.4 19 19 A S S > S- 0 0 33 33,-0.1 3,-2.2 4,-0.0 -1,-0.1 -0.743 89.4-102.8-118.7 165.3 7.6 -8.7 -5.1 20 20 A P T 3 S+ 0 0 140 0, 0.0 -3,-0.0 0, 0.0 -1,-0.0 0.629 123.8 58.0 -59.9 -12.1 4.6 -10.9 -5.7 21 21 A A T 3 S+ 0 0 44 30,-0.1 31,-2.5 2,-0.0 2,-0.3 0.138 96.7 83.4-103.9 17.8 3.4 -9.7 -2.4 22 22 A E B < -c 52 0A 2 -3,-2.2 2,-0.3 29,-0.3 31,-0.2 -0.868 62.0-154.1-121.4 152.8 3.5 -6.1 -3.5 23 23 A V - 0 0 5 29,-1.9 2,-0.4 -2,-0.3 -5,-0.1 -0.940 19.2-117.0-128.2 150.7 0.9 -4.0 -5.4 24 24 A T - 0 0 26 -2,-0.3 2,-0.3 -8,-0.1 -8,-0.2 -0.717 32.7-177.9 -89.6 133.6 1.3 -1.0 -7.7 25 25 A M B -F 15 0B 1 -10,-1.4 -10,-2.7 -2,-0.4 2,-0.4 -0.911 14.2-145.4-128.8 156.6 -0.3 2.3 -6.7 26 26 A K > - 0 0 93 -2,-0.3 3,-1.8 -12,-0.2 -15,-0.2 -0.960 33.6 -95.4-125.6 141.3 -0.6 5.7 -8.3 27 27 A K T 3 S+ 0 0 140 -2,-0.4 -15,-0.2 1,-0.3 3,-0.1 -0.289 113.1 29.8 -54.1 125.4 -0.6 9.1 -6.7 28 28 A G T 3 S+ 0 0 50 -17,-2.1 2,-0.3 1,-0.4 -1,-0.3 0.440 91.8 126.0 101.7 2.2 -4.2 10.2 -6.2 29 29 A D < - 0 0 75 -3,-1.8 -18,-2.4 -18,-0.3 2,-0.7 -0.694 59.7-129.1 -95.7 146.7 -5.6 6.7 -5.8 30 30 A I E -A 10 0A 71 -2,-0.3 2,-0.2 -20,-0.2 -20,-0.2 -0.856 28.8-163.5 -97.6 113.6 -7.7 5.6 -2.9 31 31 A L E -A 9 0A 0 -22,-2.4 -22,-3.1 -2,-0.7 2,-0.5 -0.651 14.5-129.6 -96.9 153.9 -6.3 2.4 -1.5 32 32 A T E -AD 8 45A 1 13,-1.5 13,-2.1 -2,-0.2 2,-0.3 -0.909 21.4-130.9-104.9 126.6 -8.1 -0.0 0.9 33 33 A L E + D 0 44A 10 -26,-3.9 -26,-0.4 -2,-0.5 11,-0.2 -0.606 34.3 162.5 -80.5 131.4 -6.2 -1.0 4.0 34 34 A L E S+ 0 0 50 9,-3.3 2,-0.3 -2,-0.3 10,-0.2 0.686 72.2 4.0-113.0 -38.5 -6.1 -4.7 4.7 35 35 A N E + D 0 43A 70 8,-1.8 8,-3.0 1,-0.0 -1,-0.3 -0.893 49.1 168.6-156.4 119.8 -3.3 -5.0 7.3 36 36 A S + 0 0 50 -2,-0.3 6,-0.1 6,-0.2 -1,-0.0 -0.064 44.7 117.9-121.2 30.4 -1.3 -2.2 8.9 37 37 A T + 0 0 127 2,-0.0 2,-0.3 6,-0.0 -1,-0.1 0.679 66.0 74.9 -71.3 -14.3 0.5 -4.2 11.6 38 38 A N S S- 0 0 40 3,-0.5 5,-0.1 -3,-0.2 -3,-0.0 -0.719 70.2-152.7 -99.4 147.2 3.7 -3.3 9.9 39 39 A K S S+ 0 0 188 -2,-0.3 -1,-0.1 1,-0.1 3,-0.1 0.749 95.4 34.2 -89.9 -28.0 5.2 0.2 10.3 40 40 A D S S+ 0 0 81 1,-0.2 15,-2.4 15,-0.1 16,-0.5 0.730 122.4 40.6 -99.2 -26.7 7.1 0.3 7.1 41 41 A W E - E 0 54A 2 13,-0.3 -3,-0.5 14,-0.2 2,-0.4 -0.981 63.0-164.5-129.7 134.9 4.8 -1.7 4.9 42 42 A W E - E 0 53A 40 11,-3.3 11,-2.1 -2,-0.4 2,-0.6 -0.967 19.7-132.1-120.9 130.8 1.0 -1.7 4.7 43 43 A K E +DE 35 52A 45 -8,-3.0 -9,-3.3 -2,-0.4 -8,-1.8 -0.714 39.3 169.4 -81.5 121.0 -1.1 -4.3 3.0 44 44 A V E -DE 33 51A 0 7,-3.3 7,-2.6 -2,-0.6 2,-0.5 -0.818 32.0-130.5-130.9 168.9 -3.7 -2.7 0.7 45 45 A E E -DE 32 50A 9 -13,-2.1 -13,-1.5 -2,-0.3 2,-0.6 -0.982 15.7-167.4-124.8 118.7 -6.2 -3.6 -1.9 46 46 A V E > - E 0 49A 7 3,-3.0 2,-3.7 -2,-0.5 3,-3.2 -0.943 66.7 -53.6-111.7 112.5 -6.3 -1.7 -5.2 47 47 A N T 3 S- 0 0 143 -2,-0.6 -44,-0.2 1,-0.3 -43,-0.1 -0.243 127.8 -22.2 60.2 -58.0 -9.4 -2.3 -7.4 48 48 A D T 3 S+ 0 0 96 -2,-3.7 2,-0.5 1,-0.1 -1,-0.3 0.327 115.9 100.2-155.5 -9.9 -8.9 -6.0 -7.3 49 49 A R E < - E 0 46A 133 -3,-3.2 -3,-3.0 -25,-0.1 2,-0.5 -0.751 52.0-160.1 -96.2 127.9 -5.2 -6.5 -6.5 50 50 A Q E + E 0 45A 92 -2,-0.5 2,-0.3 -5,-0.2 -5,-0.2 -0.907 35.9 101.5-109.3 131.9 -4.1 -7.3 -3.0 51 51 A G E - E 0 44A 3 -7,-2.6 -7,-3.3 -2,-0.5 -29,-0.3 -0.981 61.0 -62.2 178.2-174.4 -0.6 -6.6 -1.8 52 52 A F E +cE 22 43A 25 -31,-2.5 -29,-1.9 -2,-0.3 -9,-0.2 -0.655 36.6 175.4 -99.4 150.0 1.9 -4.5 0.2 53 53 A V E - E 0 42A 0 -11,-2.1 -11,-3.3 -2,-0.3 2,-0.2 -0.938 44.5 -78.0-142.0 160.1 3.0 -0.9 -0.3 54 54 A P E > - E 0 41A 0 0, 0.0 3,-1.8 0, 0.0 -13,-0.3 -0.434 30.5-144.1 -61.7 129.7 5.2 1.6 1.6 55 55 A A G > S+ 0 0 14 -15,-2.4 3,-1.0 1,-0.3 -14,-0.2 0.760 102.8 62.1 -66.3 -23.2 3.4 3.0 4.7 56 56 A A G 3 S+ 0 0 49 -16,-0.5 -1,-0.3 1,-0.2 -15,-0.1 0.476 99.9 55.8 -79.2 -2.1 5.3 6.2 3.9 57 57 A Y G < S+ 0 0 12 -3,-1.8 -45,-2.2 -45,-0.1 -44,-0.9 0.351 105.4 58.4-109.3 2.3 3.4 6.3 0.6 58 58 A V E < -B 11 0A 10 -3,-1.0 2,-0.4 -47,-0.2 -47,-0.2 -0.959 62.3-158.0-136.7 149.7 -0.0 6.1 2.1 59 59 A K E -B 10 0A 101 -49,-1.8 -49,-2.5 -2,-0.3 2,-0.2 -0.991 30.4-105.9-131.8 137.8 -2.1 8.2 4.5 60 60 A K E -B 9 0A 71 -2,-0.4 -51,-0.2 -51,-0.2 -53,-0.0 -0.392 23.9-166.8 -59.1 124.6 -5.1 7.3 6.7 61 61 A L 0 0 77 -53,-2.4 -52,-0.2 -2,-0.2 -1,-0.2 0.633 360.0 360.0 -87.4 -16.3 -8.3 8.8 5.1 62 62 A D 0 0 186 -54,-0.6 -1,-0.1 -3,-0.0 -2,-0.0 -0.957 360.0 360.0-117.2 360.0 -10.2 8.1 8.3 63 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 64 1 B A 0 0 74 0, 0.0 2,-0.2 0, 0.0 -42,-0.1 0.000 360.0 360.0 360.0 120.7 5.3 -8.5 4.6 65 2 B P - 0 0 12 0, 0.0 2,-1.7 0, 0.0 -25,-0.1 -0.358 360.0-143.7 -57.0 120.0 8.6 -7.4 3.0 66 3 B S S S+ 0 0 120 -2,-0.2 2,-0.3 2,-0.1 0, 0.0 -0.352 72.5 64.5 -85.4 56.9 11.4 -8.0 5.5 67 4 B Y S S- 0 0 106 -2,-1.7 -27,-0.1 0, 0.0 0, 0.0 -0.968 93.6 -70.0-164.5 171.0 13.3 -4.9 4.5 68 5 B S - 0 0 102 -2,-0.3 -2,-0.1 1,-0.1 -27,-0.0 -0.496 48.8-125.4 -74.9 137.8 13.2 -1.1 4.4 69 6 B P - 0 0 25 0, 0.0 -1,-0.1 0, 0.0 -28,-0.1 -0.393 36.8 -82.1 -79.6 159.5 10.8 0.5 1.9 70 7 B P - 0 0 39 0, 0.0 -14,-0.1 0, 0.0 0, 0.0 -0.324 51.9-103.3 -62.6 139.5 11.8 3.1 -0.7 71 8 B P - 0 0 109 0, 0.0 -14,-0.0 0, 0.0 -3,-0.0 -0.329 43.2 -95.8 -63.8 143.5 12.1 6.7 0.6 72 9 B P 0 0 63 0, 0.0 -15,-0.1 0, 0.0 -59,-0.0 -0.422 360.0 360.0 -64.0 129.1 9.2 9.1 -0.3 73 10 B P 0 0 134 0, 0.0 -60,-0.0 0, 0.0 0, 0.0 0.847 360.0 360.0 -87.5 360.0 9.9 11.2 -3.4